BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0051.0025.p (387 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_08630530.1| nitrate ABC transporter permease [Bradyrhizob... 658 0.0 ref|ZP_01046585.1| putative ABC transporter, ATP-binding protein... 653 0.0 ref|NP_949125.1| putative ABC transporter ATP-binding protein [R... 641 0.0 ref|YP_001993281.1| ABC transporter [Rhodopseudomonas palustris ... 637 0.0 ref|YP_576064.1| hypothetical protein Nham_0719 [Nitrobacter ham... 634 e-180 >ref|ZP_08630530.1| nitrate ABC transporter permease [Bradyrhizobiaceae bacterium SG-6C] gb|EGP06909.1| nitrate ABC transporter permease [Bradyrhizobiaceae bacterium SG-6C] Length = 382 Score = 658 bits (1697), Expect = 0.0, Method: Compositional matrix adjust. Identities = 318/387 (82%), Positives = 357/387 (92%), Gaps = 5/387 (1%) Query: 1 MSATDTIQAGKTREPAFGFWRRSYAMLVKEFIQLRRDRVSFAMIIIIPVMQLLLFGFAIN 60 MSAT+T G GFW+R+YAMLVKEF+QLRRDRVSFAMI+++P+MQLLLFG+AIN Sbjct: 1 MSATETTNGGMR-----GFWQRTYAMLVKEFLQLRRDRVSFAMIVMLPIMQLLLFGYAIN 55 Query: 61 TTPRHLPTAVLLQEDSDLGRSILKAMENTAYFRFTREVHNVEQFDELLQSGKVLFGVEIP 120 TTPRHLPTAVLLQEDSDLGRSILKA++NTAYFRFT++VH V +FD LL+SGKVLFGVEIP Sbjct: 56 TTPRHLPTAVLLQEDSDLGRSILKALQNTAYFRFTQQVHTVAEFDSLLESGKVLFGVEIP 115 Query: 121 RGFERAVRRGDKPALLVAADATDPVAAGSALGALGPLVQSALAHDLHIGDPPDMPFEIRA 180 RGFER VRRGD+PALLVAADATDPVA+GSALGALG +VQ+ALAHDL +GDPP+MPFEIRA Sbjct: 116 RGFERGVRRGDRPALLVAADATDPVASGSALGALGQIVQTALAHDLQVGDPPEMPFEIRA 175 Query: 181 HARYNPAAESRLNIVPGLVGTILTMTMLIFTALSVTREIERGTMESLLSMPIRPVEVMFG 240 HARYNPAAESRLNIVPGLVGTILTMTMLIFTALSVTREIERGTME+LL+MPI PVEVM G Sbjct: 176 HARYNPAAESRLNIVPGLVGTILTMTMLIFTALSVTREIERGTMENLLAMPITPVEVMLG 235 Query: 241 KIIPYVMVGFIQAGLIIGIGVLLFGVPVLGSLTLLGLLTTLFITTNLSIGYTFSTIVQNQ 300 KIIPYV+VGF+QA +IIGIG LLFGVP+LGS+ +L +L+TLFI NLSIGYTFSTI QNQ Sbjct: 236 KIIPYVLVGFLQATIIIGIGTLLFGVPILGSIGVLAVLSTLFIAANLSIGYTFSTIAQNQ 295 Query: 301 LQAMQLSMMFFLPSILLSGFMFPFAGMPVWAQYIGEGLPLTHFIRIVRAIMLKGAAMPNL 360 LQAMQ+SMMFFLP+ILLSGFMFPFAGMPVWAQ+IGE LPLTH+IRIVRAIMLKGA++ NL Sbjct: 296 LQAMQMSMMFFLPNILLSGFMFPFAGMPVWAQWIGEALPLTHYIRIVRAIMLKGASLENL 355 Query: 361 QYDTVALVALMLFAMTIAVTRFRRTLD 387 QYD +AL L+LFAMTIAVTRFRRTLD Sbjct: 356 QYDAIALCVLVLFAMTIAVTRFRRTLD 382 >ref|ZP_01046585.1| putative ABC transporter, ATP-binding protein [Nitrobacter sp. Nb-311A] gb|EAQ35421.1| putative ABC transporter, ATP-binding protein [Nitrobacter sp. Nb-311A] Length = 385 Score = 653 bits (1685), Expect = 0.0, Method: Compositional matrix adjust. Identities = 333/387 (86%), Positives = 358/387 (92%), Gaps = 2/387 (0%) Query: 1 MSATDTIQAGKTREPAFGFWRRSYAMLVKEFIQLRRDRVSFAMIIIIPVMQLLLFGFAIN 60 MSA G RE +FGFWRRSYAMLVKEFIQLRRDRVSFAMI++IPVMQLLLFG+AIN Sbjct: 1 MSAAHDHSGG--REMSFGFWRRSYAMLVKEFIQLRRDRVSFAMIVMIPVMQLLLFGYAIN 58 Query: 61 TTPRHLPTAVLLQEDSDLGRSILKAMENTAYFRFTREVHNVEQFDELLQSGKVLFGVEIP 120 TTPRHLPTAVLLQEDSDL RSILKA+ENTAYFRFT+EVH+V+ FD LL+SG VLFGVEIP Sbjct: 59 TTPRHLPTAVLLQEDSDLARSILKALENTAYFRFTQEVHDVDTFDNLLKSGTVLFGVEIP 118 Query: 121 RGFERAVRRGDKPALLVAADATDPVAAGSALGALGPLVQSALAHDLHIGDPPDMPFEIRA 180 RGFER VRRGD+PALLVAADATDPVAAGSAL ALGP+VQ+AL+HDLHIGDP D PFEIRA Sbjct: 119 RGFERGVRRGDRPALLVAADATDPVAAGSALSALGPIVQTALSHDLHIGDPSDPPFEIRA 178 Query: 181 HARYNPAAESRLNIVPGLVGTILTMTMLIFTALSVTREIERGTMESLLSMPIRPVEVMFG 240 HARYNPAA SRLNIVPGLVGTILTMTMLIFTALSVTREIERGTMESLLSMPI PVEVM G Sbjct: 179 HARYNPAASSRLNIVPGLVGTILTMTMLIFTALSVTREIERGTMESLLSMPITPVEVMIG 238 Query: 241 KIIPYVMVGFIQAGLIIGIGVLLFGVPVLGSLTLLGLLTTLFITTNLSIGYTFSTIVQNQ 300 KI+PYV+VGFIQA LIIGIGVLLFGVP+ GSLTLL LL+TLFITTNL++GYTFSTIVQNQ Sbjct: 239 KILPYVLVGFIQAALIIGIGVLLFGVPIEGSLTLLALLSTLFITTNLAVGYTFSTIVQNQ 298 Query: 301 LQAMQLSMMFFLPSILLSGFMFPFAGMPVWAQYIGEGLPLTHFIRIVRAIMLKGAAMPNL 360 LQAMQ+SMMFFLPSILLSGFMFPFAGMPVWAQ IGE LPLTH++RIVRAIMLKGA + NL Sbjct: 299 LQAMQMSMMFFLPSILLSGFMFPFAGMPVWAQRIGECLPLTHYVRIVRAIMLKGATLQNL 358 Query: 361 QYDTVALVALMLFAMTIAVTRFRRTLD 387 +YDT+ALVALML AM IAVTRFRRTLD Sbjct: 359 KYDTLALVALMLVAMAIAVTRFRRTLD 385 >ref|NP_949125.1| putative ABC transporter ATP-binding protein [Rhodopseudomonas palustris CGA009] emb|CAE29229.1| putative ABC transporter, ATP-binding protein [Rhodopseudomonas palustris CGA009] Length = 390 Score = 641 bits (1654), Expect = 0.0, Method: Compositional matrix adjust. Identities = 315/375 (84%), Positives = 347/375 (92%) Query: 13 REPAFGFWRRSYAMLVKEFIQLRRDRVSFAMIIIIPVMQLLLFGFAINTTPRHLPTAVLL 72 +EP FGF RR+YAMLVKE IQL+RDR++FAMII+IPVMQLLLFG+AINTTPRHLPTAVLL Sbjct: 16 KEPRFGFLRRTYAMLVKELIQLKRDRLTFAMIIVIPVMQLLLFGYAINTTPRHLPTAVLL 75 Query: 73 QEDSDLGRSILKAMENTAYFRFTREVHNVEQFDELLQSGKVLFGVEIPRGFERAVRRGDK 132 QEDSDLGRSILKA+ENTAYF+FTREVH+V +FD+LL SG+VLFGVEIPRGFERAVRRG+K Sbjct: 76 QEDSDLGRSILKALENTAYFKFTREVHSVAEFDDLLLSGRVLFGVEIPRGFERAVRRGEK 135 Query: 133 PALLVAADATDPVAAGSALGALGPLVQSALAHDLHIGDPPDMPFEIRAHARYNPAAESRL 192 PA+LVAADATDPVAAGSAL ALG +VQ+AL HD GDP + PFEIRAHARYNPAA SRL Sbjct: 136 PAILVAADATDPVAAGSALSALGQIVQTALMHDRVGGDPANPPFEIRAHARYNPAASSRL 195 Query: 193 NIVPGLVGTILTMTMLIFTALSVTREIERGTMESLLSMPIRPVEVMFGKIIPYVMVGFIQ 252 NIVPGLVGTILTMTMLIFTALSVTREIERGTME+LLSMPI PVEVM GKI+PYV VGFIQ Sbjct: 196 NIVPGLVGTILTMTMLIFTALSVTREIERGTMENLLSMPITPVEVMLGKILPYVGVGFIQ 255 Query: 253 AGLIIGIGVLLFGVPVLGSLTLLGLLTTLFITTNLSIGYTFSTIVQNQLQAMQLSMMFFL 312 A LI+GIGVLLFGVP+ GSL +L LL+TLFITTNL+IGYTFST+VQNQLQAMQ SMMFFL Sbjct: 256 ASLILGIGVLLFGVPLRGSLAMLALLSTLFITTNLAIGYTFSTLVQNQLQAMQASMMFFL 315 Query: 313 PSILLSGFMFPFAGMPVWAQYIGEGLPLTHFIRIVRAIMLKGAAMPNLQYDTVALVALML 372 PSILLSGFMFPFAGMP+WAQYIGE LPLTH++RIVRAIMLKG+ + NLQYD VAL+ LML Sbjct: 316 PSILLSGFMFPFAGMPIWAQYIGECLPLTHYLRIVRAIMLKGSTLENLQYDAVALLTLML 375 Query: 373 FAMTIAVTRFRRTLD 387 AMTIAVTRFRRTLD Sbjct: 376 IAMTIAVTRFRRTLD 390 >ref|YP_001993281.1| ABC transporter [Rhodopseudomonas palustris TIE-1] gb|ACF02806.1| ABC-2 type transporter [Rhodopseudomonas palustris TIE-1] Length = 390 Score = 637 bits (1643), Expect = 0.0, Method: Compositional matrix adjust. Identities = 313/375 (83%), Positives = 346/375 (92%) Query: 13 REPAFGFWRRSYAMLVKEFIQLRRDRVSFAMIIIIPVMQLLLFGFAINTTPRHLPTAVLL 72 +EP FGF RR+YAMLVKE IQL+RDR++FAMII+IPVMQLLLFG+AINTTPRHLPTAVLL Sbjct: 16 KEPRFGFLRRTYAMLVKELIQLKRDRLTFAMIIVIPVMQLLLFGYAINTTPRHLPTAVLL 75 Query: 73 QEDSDLGRSILKAMENTAYFRFTREVHNVEQFDELLQSGKVLFGVEIPRGFERAVRRGDK 132 QEDSDLGRSILKA+ENTAYF+FT EVH+V +FD+LL SG+VLFGVEIPRGFERAVRRG+K Sbjct: 76 QEDSDLGRSILKALENTAYFKFTCEVHSVAEFDDLLLSGRVLFGVEIPRGFERAVRRGEK 135 Query: 133 PALLVAADATDPVAAGSALGALGPLVQSALAHDLHIGDPPDMPFEIRAHARYNPAAESRL 192 PA+LVAADATDPVAAGSAL ALG +VQ+AL HD GDP + PFEIRAHARYNPAA SRL Sbjct: 136 PAILVAADATDPVAAGSALSALGQIVQTALMHDRVGGDPANPPFEIRAHARYNPAASSRL 195 Query: 193 NIVPGLVGTILTMTMLIFTALSVTREIERGTMESLLSMPIRPVEVMFGKIIPYVMVGFIQ 252 NIVPGLVGTILTMTMLIFTALSVTREIERGTME+LLSMPI PVEVM GKI+PYV VGFIQ Sbjct: 196 NIVPGLVGTILTMTMLIFTALSVTREIERGTMENLLSMPITPVEVMLGKILPYVGVGFIQ 255 Query: 253 AGLIIGIGVLLFGVPVLGSLTLLGLLTTLFITTNLSIGYTFSTIVQNQLQAMQLSMMFFL 312 A LI+GIGVLLFGVP+ GSL +L LL+TLFITTNL+IGYTFST+VQNQLQAMQ SMMFFL Sbjct: 256 ASLILGIGVLLFGVPLRGSLAMLALLSTLFITTNLAIGYTFSTLVQNQLQAMQASMMFFL 315 Query: 313 PSILLSGFMFPFAGMPVWAQYIGEGLPLTHFIRIVRAIMLKGAAMPNLQYDTVALVALML 372 PSILLSGFMFPFAGMP+WAQYIGE LPLTH++RIVRAIMLKG+ + NLQYD +AL+ LML Sbjct: 316 PSILLSGFMFPFAGMPIWAQYIGECLPLTHYLRIVRAIMLKGSTLENLQYDALALLTLML 375 Query: 373 FAMTIAVTRFRRTLD 387 AMTIAVTRFRRTLD Sbjct: 376 IAMTIAVTRFRRTLD 390 >ref|YP_576064.1| hypothetical protein Nham_0719 [Nitrobacter hamburgensis X14] gb|ABE61604.1| ABC-2 protein [Nitrobacter hamburgensis X14] Length = 385 Score = 634 bits (1636), Expect = e-180, Method: Compositional matrix adjust. Identities = 314/375 (83%), Positives = 347/375 (92%) Query: 13 REPAFGFWRRSYAMLVKEFIQLRRDRVSFAMIIIIPVMQLLLFGFAINTTPRHLPTAVLL 72 RE FGFWRRSYAMLVKEFIQLRRDRVSFAMI+++PVMQLLLFG+AINTTPRHLPTAVL+ Sbjct: 11 REMPFGFWRRSYAMLVKEFIQLRRDRVSFAMIVMVPVMQLLLFGYAINTTPRHLPTAVLV 70 Query: 73 QEDSDLGRSILKAMENTAYFRFTREVHNVEQFDELLQSGKVLFGVEIPRGFERAVRRGDK 132 QEDSDL RSILKA+ENT+YFRFT++VH+++ FD LL+SG VLFG+EIPRGFER VRRGD+ Sbjct: 71 QEDSDLARSILKALENTSYFRFTQQVHDIDTFDNLLKSGDVLFGIEIPRGFERGVRRGDR 130 Query: 133 PALLVAADATDPVAAGSALGALGPLVQSALAHDLHIGDPPDMPFEIRAHARYNPAAESRL 192 PALLVAADATDPVAAGSAL ALGP+VQ+ALAHDL IG PD PFEIR HAR+NPAA SRL Sbjct: 131 PALLVAADATDPVAAGSALSALGPIVQTALAHDLFIGSSPDPPFEIRVHARFNPAASSRL 190 Query: 193 NIVPGLVGTILTMTMLIFTALSVTREIERGTMESLLSMPIRPVEVMFGKIIPYVMVGFIQ 252 NIVPGLVGTILTMTMLIFTALSVTREIERGTME+LLSMPI PVEVM GKI+PYV+VGFIQ Sbjct: 191 NIVPGLVGTILTMTMLIFTALSVTREIERGTMENLLSMPITPVEVMIGKILPYVLVGFIQ 250 Query: 253 AGLIIGIGVLLFGVPVLGSLTLLGLLTTLFITTNLSIGYTFSTIVQNQLQAMQLSMMFFL 312 A LIIGIG LLFGVP+ GS+TLL LL+TLFITTNL++GYTFSTIVQNQLQAMQ+S MFFL Sbjct: 251 AALIIGIGALLFGVPIDGSMTLLALLSTLFITTNLAVGYTFSTIVQNQLQAMQMSTMFFL 310 Query: 313 PSILLSGFMFPFAGMPVWAQYIGEGLPLTHFIRIVRAIMLKGAAMPNLQYDTVALVALML 372 PSILLSGFMFPF+GMPVWAQY+GE LPLTH+IRIVRAIMLKGA + NLQYDT+ L+ LML Sbjct: 311 PSILLSGFMFPFSGMPVWAQYVGECLPLTHYIRIVRAIMLKGATLQNLQYDTLVLLVLML 370 Query: 373 FAMTIAVTRFRRTLD 387 AM IAVTRFRRTLD Sbjct: 371 VAMVIAVTRFRRTLD 385