BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0051.0023.p (265 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_772290.1| hypothetical protein bll5650 [Bradyrhizobium ja... 435 e-120 ref|YP_001241193.1| hypothetical protein BBta_5305 [Bradyrhizobi... 430 e-118 ref|YP_001204915.1| hypothetical protein BRADO2869 [Bradyrhizobi... 419 e-115 ref|ZP_01046583.1| hypothetical protein NB311A_18181 [Nitrobacte... 405 e-111 ref|YP_568929.1| putative efflux protein [Rhodopseudomonas palus... 402 e-110 >ref|NP_772290.1| hypothetical protein bll5650 [Bradyrhizobium japonicum USDA 110] dbj|BAC50915.1| bll5650 [Bradyrhizobium japonicum USDA 110] Length = 262 Score = 435 bits (1118), Expect = e-120, Method: Compositional matrix adjust. Identities = 209/244 (85%), Positives = 226/244 (92%), Gaps = 4/244 (1%) Query: 22 CQEKRDPGFQGWVEADMIFVSPDESGRVIKLNVREGDEVKPGDLLYSVDDDLQRADLNQN 81 C+EKRDPGFQGWVEADMIFVSPDE+GRV KLN+REGDEVK GD LYSVDDDLQ ADLNQN Sbjct: 23 CKEKRDPGFQGWVEADMIFVSPDEAGRVTKLNIREGDEVKVGDALYSVDDDLQLADLNQN 82 Query: 82 NATLANARQSYDRAASLRGTGAGTQASLDSAVSALRVAEARVNTSQTRLDRRKGFAPIAG 141 ATLANA+Q+YDRAASL TG+GTQA+LDSAVSALRVAEARV TS+TR+ RR+GFAP+AG Sbjct: 83 KATLANAQQTYDRAASLNKTGSGTQANLDSAVSALRVAEARVATSETRMARRRGFAPVAG 142 Query: 142 SIQQIYFREGEMVQAQRPVLSIMPPGNMKLRFFVPETELPKLALGDEVRVTCDNCAADLT 201 +IQQIYFREGEMV AQRPVLSIMPPGNMKLRFFVPETELPKLA+GD VR+ CDNCAADLT Sbjct: 143 TIQQIYFREGEMVAAQRPVLSIMPPGNMKLRFFVPETELPKLAIGDTVRIGCDNCAADLT 202 Query: 202 AKIYFIATTAEYTPPVIYSLDERNKLVYLIQARPSRPDVLRVGQPISIYLNPKTTPKTPV 261 AKIYFIAT+AEYTPPVIYSLDERNKLVYLIQARPSRPD LRVGQPI +YLN PKTPV Sbjct: 203 AKIYFIATSAEYTPPVIYSLDERNKLVYLIQARPSRPDALRVGQPIDVYLN----PKTPV 258 Query: 262 ADRR 265 AD+R Sbjct: 259 ADKR 262 >ref|YP_001241193.1| hypothetical protein BBta_5305 [Bradyrhizobium sp. BTAi1] gb|ABQ37287.1| hypothetical protein BBta_5305 [Bradyrhizobium sp. BTAi1] Length = 258 Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust. Identities = 207/260 (79%), Positives = 230/260 (88%), Gaps = 4/260 (1%) Query: 6 IMKLVTAVALAAALAGCQEKRDPGFQGWVEADMIFVSPDESGRVIKLNVREGDEVKPGDL 65 ++ + + A GC+E RDPG+QGWVEADMIFVSPDE+GRV +LNVREGDEVK GD Sbjct: 3 LLHCLAVLVTAFTFNGCKETRDPGYQGWVEADMIFVSPDEAGRVTRLNVREGDEVKVGDP 62 Query: 66 LYSVDDDLQRADLNQNNATLANARQSYDRAASLRGTGAGTQASLDSAVSALRVAEARVNT 125 LY+VDDDLQ+ADLNQ ATLANA+Q+YDRAA+L TGAGTQA+LDSAVSALRVAEA V T Sbjct: 63 LYAVDDDLQQADLNQTKATLANAQQTYDRAAALSKTGAGTQATLDSAVSALRVAEAHVVT 122 Query: 126 SQTRLDRRKGFAPIAGSIQQIYFREGEMVQAQRPVLSIMPPGNMKLRFFVPETELPKLAL 185 SQTRL RRKG AP+AG+IQQIYFREGEMV AQRPVLSIMPPGNMKLRF+VPETELPK A+ Sbjct: 123 SQTRLARRKGVAPVAGTIQQIYFREGEMVAAQRPVLSIMPPGNMKLRFYVPETELPKFAI 182 Query: 186 GDEVRVTCDNCAADLTAKIYFIATTAEYTPPVIYSLDERNKLVYLIQARPSRPDVLRVGQ 245 GDEVRVTCDNCAADLTA++YF+ATTAEYTPPVIYSLDERNKLVYLIQARPSRPD LRVGQ Sbjct: 183 GDEVRVTCDNCAADLTARVYFLATTAEYTPPVIYSLDERNKLVYLIQARPSRPDALRVGQ 242 Query: 246 PISIYLNPKTTPKTPVADRR 265 P+SIY N PKTPVAD+R Sbjct: 243 PVSIYPN----PKTPVADQR 258 >ref|YP_001204915.1| hypothetical protein BRADO2869 [Bradyrhizobium sp. ORS 278] emb|CAL76678.1| conserved hypothetical protein; putative Single hybrid motif [Bradyrhizobium sp. ORS 278] Length = 258 Score = 419 bits (1078), Expect = e-115, Method: Compositional matrix adjust. Identities = 201/260 (77%), Positives = 232/260 (89%), Gaps = 4/260 (1%) Query: 6 IMKLVTAVALAAALAGCQEKRDPGFQGWVEADMIFVSPDESGRVIKLNVREGDEVKPGDL 65 ++ + + A +L GC++ RDPG+QGWVEADMIFVSPDE+GRV +LNVREGDE+K GD Sbjct: 3 LLHCLAVLVTAFSLNGCKDTRDPGYQGWVEADMIFVSPDEAGRVTRLNVREGDEIKVGDP 62 Query: 66 LYSVDDDLQRADLNQNNATLANARQSYDRAASLRGTGAGTQASLDSAVSALRVAEARVNT 125 LYSVDDDLQ+ADLNQ ATLANA+Q+YDRAA+L TGAGTQA+LD+AVSALRVAEA V T Sbjct: 63 LYSVDDDLQQADLNQTKATLANAQQTYDRAAALSKTGAGTQATLDAAVSALRVAEAHVVT 122 Query: 126 SQTRLDRRKGFAPIAGSIQQIYFREGEMVQAQRPVLSIMPPGNMKLRFFVPETELPKLAL 185 SQTRL RRKG AP+AG+IQQIYFREGEMV AQRPVLSIMPPGNMKLRF+V ET+LPK A+ Sbjct: 123 SQTRLARRKGVAPVAGTIQQIYFREGEMVAAQRPVLSIMPPGNMKLRFYVSETDLPKFAI 182 Query: 186 GDEVRVTCDNCAADLTAKIYFIATTAEYTPPVIYSLDERNKLVYLIQARPSRPDVLRVGQ 245 G+EVRVTCDNCAADLTA+IYF+A+TAEYTPPVIYSLDERNKLVYLIQARP+RPD LRVGQ Sbjct: 183 GEEVRVTCDNCAADLTARIYFLASTAEYTPPVIYSLDERNKLVYLIQARPARPDALRVGQ 242 Query: 246 PISIYLNPKTTPKTPVADRR 265 P+SIY P+ PKTPVAD++ Sbjct: 243 PVSIY--PQ--PKTPVADKQ 258 >ref|ZP_01046583.1| hypothetical protein NB311A_18181 [Nitrobacter sp. Nb-311A] gb|EAQ35419.1| hypothetical protein NB311A_18181 [Nitrobacter sp. Nb-311A] Length = 257 Score = 405 bits (1042), Expect = e-111, Method: Compositional matrix adjust. Identities = 197/256 (76%), Positives = 224/256 (87%), Gaps = 1/256 (0%) Query: 1 MTGSRIMKLV-TAVALAAALAGCQEKRDPGFQGWVEADMIFVSPDESGRVIKLNVREGDE 59 MT RI+ V A+AL + GC +KR PG+QGWVEADMIFVSPDESGRV KLNVREGD Sbjct: 1 MTALRIVARVGAALALTCLVVGCGQKRPPGYQGWVEADMIFVSPDESGRVTKLNVREGDV 60 Query: 60 VKPGDLLYSVDDDLQRADLNQNNATLANARQSYDRAASLRGTGAGTQASLDSAVSALRVA 119 V+ G LYSVDD+LQ+ADLNQN ATLANA+Q+YDRAASLR TGAGTQA+LD+A+SALRVA Sbjct: 61 VEVGTPLYSVDDELQQADLNQNKATLANAQQTYDRAASLRKTGAGTQATLDAALSALRVA 120 Query: 120 EARVNTSQTRLDRRKGFAPIAGSIQQIYFREGEMVQAQRPVLSIMPPGNMKLRFFVPETE 179 EARVNTS+TRL RRKGFAP+AG+IQQIYFREGEM AQRPVLSIMPPGNMK+RFFVPE + Sbjct: 121 EARVNTSETRLSRRKGFAPVAGTIQQIYFREGEMTPAQRPVLSIMPPGNMKIRFFVPEPD 180 Query: 180 LPKLALGDEVRVTCDNCAADLTAKIYFIATTAEYTPPVIYSLDERNKLVYLIQARPSRPD 239 LPKL +G EVRVTCDNCA DLTA+IYFIAT AEYTPPVIYSL+ERNKLV+L+QARP RPD Sbjct: 181 LPKLKIGQEVRVTCDNCAPDLTARIYFIATQAEYTPPVIYSLEERNKLVFLVQARPDRPD 240 Query: 240 VLRVGQPISIYLNPKT 255 LRVGQP+++ L+ T Sbjct: 241 RLRVGQPVTVELDAAT 256 >ref|YP_568929.1| putative efflux protein [Rhodopseudomonas palustris BisB5] gb|ABE39028.1| putative efflux protein [Rhodopseudomonas palustris BisB5] Length = 266 Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust. Identities = 189/259 (72%), Positives = 223/259 (86%) Query: 4 SRIMKLVTAVALAAALAGCQEKRDPGFQGWVEADMIFVSPDESGRVIKLNVREGDEVKPG 63 +R ++ A+++ A AGC DPG+QGWVEAD+IFVSPDESGRV KL VREGDE + G Sbjct: 3 ARPIQAALALSMLVAFAGCSNTTDPGYQGWVEADLIFVSPDESGRVTKLTVREGDETRKG 62 Query: 64 DLLYSVDDDLQRADLNQNNATLANARQSYDRAASLRGTGAGTQASLDSAVSALRVAEARV 123 DL+Y++DDDLQ+ADLNQNNATLANARQS+DRA SL TG+GTQA+LD+AVSALRVAEARV Sbjct: 63 DLIYTLDDDLQQADLNQNNATLANARQSFDRAQSLSKTGSGTQANLDAAVSALRVAEARV 122 Query: 124 NTSQTRLDRRKGFAPIAGSIQQIYFREGEMVQAQRPVLSIMPPGNMKLRFFVPETELPKL 183 TS+TRL RR+ AP+ G++QQIYFREGEM AQ+PVLSI+PPGNMKLRFFVPE LPKL Sbjct: 123 ETSKTRLMRREIRAPVTGTVQQIYFREGEMAAAQKPVLSILPPGNMKLRFFVPEAALPKL 182 Query: 184 ALGDEVRVTCDNCAADLTAKIYFIATTAEYTPPVIYSLDERNKLVYLIQARPSRPDVLRV 243 ++GDE+RVTCDNCA DLTA+IY+IATTAEYTPPVIYSLDERNKLVYLIQARP RP LRV Sbjct: 183 SIGDEIRVTCDNCAPDLTARIYYIATTAEYTPPVIYSLDERNKLVYLIQARPDRPTSLRV 242 Query: 244 GQPISIYLNPKTTPKTPVA 262 GQPI++Y+ PK+ + P A Sbjct: 243 GQPINVYVKPKSPAQPPAA 261