BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0051.0022.p (242 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001204914.1| TetR family transcriptional regulator [Brady... 286 3e-75 ref|YP_001241194.1| TetR family transcriptional regulator [Brady... 282 3e-74 ref|ZP_01046582.1| transcriptional regulatory protein [Nitrobact... 280 1e-73 ref|YP_576061.1| TetR family transcriptional regulator [Nitrobac... 272 3e-71 ref|NP_772291.1| transcriptional regulator [Bradyrhizobium japon... 271 4e-71 >ref|YP_001204914.1| TetR family transcriptional regulator [Bradyrhizobium sp. ORS 278] emb|CAL76677.1| putative transcriptional regulatory protein, TetR family [Bradyrhizobium sp. ORS 278] Length = 204 Score = 286 bits (731), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 137/187 (73%), Positives = 160/187 (85%) Query: 56 IVAAAMDEFIARGFAATRLDDVAKRAGVAKGTLYLYFKDKESMFEELIRTAVVPLVNRMA 115 IV AAMDEFIARGFAATRLDD+AKRAGVAKGT+YL+FKDKESMFEELIRTA+VP V R+A Sbjct: 18 IVQAAMDEFIARGFAATRLDDIAKRAGVAKGTIYLHFKDKESMFEELIRTAIVPFVGRLA 77 Query: 116 APPTITGPVRDAVERFAETFIREIVSTRRGDIVRLIVSEGPRFPAIADFYFREVVSKGMA 175 APP + G VRD VE A F++EI TRR D+VRLI++EGPRFP IADFY+REVVS+G+A Sbjct: 78 APPPVGGSVRDMVEGLARMFLQEIAGTRRADLVRLIIAEGPRFPEIADFYYREVVSRGLA 137 Query: 176 AMQALIQLAITRGEIRQRQLAQFPQLVVAPAIVAVIWQSLFARHAPLDALAMFKVHLDLI 235 AM+ALIQLA+TRGEIR+ +L Q PQL++AP +VAVIW+SLF HAPLDA AM + HLDLI Sbjct: 138 AMRALIQLAVTRGEIREPKLVQHPQLMIAPMMVAVIWKSLFETHAPLDAEAMLQTHLDLI 197 Query: 236 FGERSKT 242 FG R T Sbjct: 198 FGPRRPT 204 >ref|YP_001241194.1| TetR family transcriptional regulator [Bradyrhizobium sp. BTAi1] gb|ABQ37288.1| transcriptional regulator, TetR family [Bradyrhizobium sp. BTAi1] Length = 219 Score = 282 bits (722), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 133/184 (72%), Positives = 159/184 (86%) Query: 56 IVAAAMDEFIARGFAATRLDDVAKRAGVAKGTLYLYFKDKESMFEELIRTAVVPLVNRMA 115 IV AAMDEFIARGFAATRLDD+A+RAGVAKGT+YL+FKDKESMFEELIRTA+VP V+R+ Sbjct: 33 IVQAAMDEFIARGFAATRLDDIARRAGVAKGTIYLHFKDKESMFEELIRTAIVPFVSRLT 92 Query: 116 APPTITGPVRDAVERFAETFIREIVSTRRGDIVRLIVSEGPRFPAIADFYFREVVSKGMA 175 PP G VRD VE A+ F++E+ TRR D+VRLI++EGPRFPAIADFY+REVVS+G+A Sbjct: 93 TPPAPGGSVRDMVEALAKMFLQEVAGTRRADLVRLIIAEGPRFPAIADFYYREVVSRGLA 152 Query: 176 AMQALIQLAITRGEIRQRQLAQFPQLVVAPAIVAVIWQSLFARHAPLDALAMFKVHLDLI 235 AM+ALIQLAITRGEIR+ L +PQL++AP +VAV+W+SLF RHAPLDA AM + HLDLI Sbjct: 153 AMRALIQLAITRGEIREPNLVAYPQLMIAPMMVAVLWKSLFERHAPLDAEAMLQTHLDLI 212 Query: 236 FGER 239 FG R Sbjct: 213 FGAR 216 >ref|ZP_01046582.1| transcriptional regulatory protein [Nitrobacter sp. Nb-311A] gb|EAQ35418.1| transcriptional regulatory protein [Nitrobacter sp. Nb-311A] Length = 240 Score = 280 bits (716), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 135/237 (56%), Positives = 175/237 (73%), Gaps = 18/237 (7%) Query: 21 IRAAAARIPKVASAKLPEPKPAANRAEKSAERRAAIVAA------------------AMD 62 ++A+ +R K A+A + +PAA+RA + + A +D Sbjct: 1 MKASGSRPRKTATANSAKGRPAASRAGAATTAQTGGTAGPQNRAARAAQRRAAIVAAGLD 60 Query: 63 EFIARGFAATRLDDVAKRAGVAKGTLYLYFKDKESMFEELIRTAVVPLVNRMAAPPTITG 122 EF ARGFAATRLDDVAKRAGVAKGT+YL+FKDKE++F+EL+RTA+VPL+ + G Sbjct: 61 EFTARGFAATRLDDVAKRAGVAKGTIYLHFKDKEALFQELVRTALVPLIGNLMTTLAAGG 120 Query: 123 PVRDAVERFAETFIREIVSTRRGDIVRLIVSEGPRFPAIADFYFREVVSKGMAAMQALIQ 182 VR+ +ERFAETF+RE+ T+RGD+VRLI++EG RFP++ADFYFREVVS+G+A M+ALI+ Sbjct: 121 SVREVLERFAETFVREVAGTKRGDVVRLIMAEGARFPSLADFYFREVVSRGLAGMRALIE 180 Query: 183 LAITRGEIRQRQLAQFPQLVVAPAIVAVIWQSLFARHAPLDALAMFKVHLDLIFGER 239 I RGEIR +LA FPQ+V+APA+VAV+WQ LF RHAPLDA+AM KVHLDLIFGER Sbjct: 181 HGIARGEIRNERLADFPQIVIAPAMVAVMWQGLFGRHAPLDAVAMLKVHLDLIFGER 237 >ref|YP_576061.1| TetR family transcriptional regulator [Nitrobacter hamburgensis X14] gb|ABE61601.1| transcriptional regulator, TetR family [Nitrobacter hamburgensis X14] Length = 211 Score = 272 bits (695), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 135/196 (68%), Positives = 168/196 (85%) Query: 44 NRAEKSAERRAAIVAAAMDEFIARGFAATRLDDVAKRAGVAKGTLYLYFKDKESMFEELI 103 NRA A+RRAAI+AAA+DEF ARGFAATRLDDVAKRAGVAKGT+YL+FKDKE++F++L+ Sbjct: 13 NRAAGVAQRRAAIIAAALDEFTARGFAATRLDDVAKRAGVAKGTIYLHFKDKEALFQDLV 72 Query: 104 RTAVVPLVNRMAAPPTITGPVRDAVERFAETFIREIVSTRRGDIVRLIVSEGPRFPAIAD 163 RTA+VPL+ + A P G VR+ +ERFAE F+R++ T+RGDIVRLI++EG RFP++AD Sbjct: 73 RTALVPLIGNLTAVPAAGGSVREMLERFAEAFVRDVAETKRGDIVRLIMAEGTRFPSLAD 132 Query: 164 FYFREVVSKGMAAMQALIQLAITRGEIRQRQLAQFPQLVVAPAIVAVIWQSLFARHAPLD 223 FYFREVVS+G+A M+ LI+ I RGEIR +LA FPQ+VVAPA++AV+WQ LF RHAPLD Sbjct: 133 FYFREVVSRGLAGMRKLIEYGIARGEIRNARLADFPQIVVAPAMIAVMWQGLFVRHAPLD 192 Query: 224 ALAMFKVHLDLIFGER 239 A+AM KVHLDLIFGER Sbjct: 193 AVAMLKVHLDLIFGER 208 >ref|NP_772291.1| transcriptional regulator [Bradyrhizobium japonicum USDA 110] dbj|BAC50916.1| transcriptional regulatory protein [Bradyrhizobium japonicum USDA 110] Length = 226 Score = 271 bits (694), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 141/205 (68%), Positives = 177/205 (86%) Query: 38 EPKPAANRAEKSAERRAAIVAAAMDEFIARGFAATRLDDVAKRAGVAKGTLYLYFKDKES 97 E PA+NRA ++AERRAAIV AAM+EFIARGFAATRLDD+A+RAGVAKGT+YL+FKDKES Sbjct: 22 EAAPASNRATRAAERRAAIVEAAMEEFIARGFAATRLDDIARRAGVAKGTIYLHFKDKES 81 Query: 98 MFEELIRTAVVPLVNRMAAPPTITGPVRDAVERFAETFIREIVSTRRGDIVRLIVSEGPR 157 MFEEL+R +VP+V R+ P G VRD +E FA F++E++ TRRGD+VRLIV+EGPR Sbjct: 82 MFEELVRVVIVPVVARLTTLPPPVGSVRDLIEAFAGNFLKEVIGTRRGDLVRLIVAEGPR 141 Query: 158 FPAIADFYFREVVSKGMAAMQALIQLAITRGEIRQRQLAQFPQLVVAPAIVAVIWQSLFA 217 FP++ADFY+REVVS+G+AAM+ALI+L I RGEIR++ LA++PQ+++APA++AVIWQSLF Sbjct: 142 FPSVADFYYREVVSRGVAAMRALIELGIARGEIREKDLARYPQILIAPAMIAVIWQSLFE 201 Query: 218 RHAPLDALAMFKVHLDLIFGERSKT 242 RHAPLDA M +VHLDLIFGER T Sbjct: 202 RHAPLDARDMLRVHLDLIFGERRTT 226