BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0051.0012.p (268 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_772304.1| carbon monoxide dehydrogenase medium subunit [B... 500 e-139 emb|CAA12064.1| putative carbon monoxide dehydrogenase medium su... 496 e-138 ref|ZP_08630540.1| carbon monoxide dehydrogenase medium chain [B... 489 e-136 ref|YP_004107894.1| FAD-binding molybdopterin dehydrogenase prot... 486 e-135 ref|YP_001993296.1| molybdopterin dehydrogenase [Rhodopseudomona... 482 e-134 >ref|NP_772304.1| carbon monoxide dehydrogenase medium subunit [Bradyrhizobium japonicum USDA 110] dbj|BAC50929.1| cooxM [Bradyrhizobium japonicum USDA 110] Length = 268 Score = 500 bits (1287), Expect = e-139, Method: Compositional matrix adjust. Identities = 245/268 (91%), Positives = 259/268 (96%) Query: 1 MYEFKYHRPGTVRQAANLLVKNEDAKLIAGGHTLVPVMKQRLASPPHLVDLSHIEGLDTI 60 MYEFKYHRPGTVRQAANLLVKNEDAK+IAGGHTL+PVMKQRLASPPHLVDLSHIEGL+ I Sbjct: 1 MYEFKYHRPGTVRQAANLLVKNEDAKVIAGGHTLIPVMKQRLASPPHLVDLSHIEGLNAI 60 Query: 61 EMKGRSLVIGATAKHAEVANSAVVGEAIPALAELAGLIGDPAVRHRGTIGGSLANNDPTA 120 EMKGRS+VIGATAKHAEVA SAVVGEAIPALA LAG IGDPAVRH+GTIGGSLANNDPTA Sbjct: 61 EMKGRSVVIGATAKHAEVATSAVVGEAIPALASLAGGIGDPAVRHKGTIGGSLANNDPTA 120 Query: 121 DYPAAVLALGATIVTNKRRLKAEEYFQGLFSTALEADEIITKVMFPLPKKAAYVKFRNQA 180 DYPAAVLALGATIVTNKRRLKAEEYFQGLF+TALEADEIITKVMFPLPKKAAY+KFRNQA Sbjct: 121 DYPAAVLALGATIVTNKRRLKAEEYFQGLFTTALEADEIITKVMFPLPKKAAYIKFRNQA 180 Query: 181 SRYALVGVFVAKRPSDVRVAVTGAGSDGVFRVTAFEDALKKRFSHKVLDGIAVSADGLNS 240 SRYALVGVFVA+RPSDVRVAVTGAGS+GVFRVTAFE+ALKKRFS K LDGI V A+GLNS Sbjct: 181 SRYALVGVFVARRPSDVRVAVTGAGSEGVFRVTAFEEALKKRFSAKALDGIEVPAEGLNS 240 Query: 241 DLHGSAEYRAHLIGVLTRRAVETANAKD 268 D+HGSAEYRAHLIGVLTRRAV+ ANAK+ Sbjct: 241 DIHGSAEYRAHLIGVLTRRAVDAANAKE 268 >emb|CAA12064.1| putative carbon monoxide dehydrogenase medium subunit [Bradyrhizobium japonicum USDA 110] Length = 268 Score = 496 bits (1277), Expect = e-138, Method: Compositional matrix adjust. Identities = 244/268 (91%), Positives = 257/268 (95%) Query: 1 MYEFKYHRPGTVRQAANLLVKNEDAKLIAGGHTLVPVMKQRLASPPHLVDLSHIEGLDTI 60 MYEFKYHRPGTVRQAANLLVKNEDAK+IAGGHTL+PVMKQRLASPPHLVDLSHIEGL+ I Sbjct: 1 MYEFKYHRPGTVRQAANLLVKNEDAKVIAGGHTLIPVMKQRLASPPHLVDLSHIEGLNAI 60 Query: 61 EMKGRSLVIGATAKHAEVANSAVVGEAIPALAELAGLIGDPAVRHRGTIGGSLANNDPTA 120 EMKGRS+VIGATAKHAEVA SAVVGEAIPALA LAG IGDPAVRH+GTIGGSLANNDPTA Sbjct: 61 EMKGRSVVIGATAKHAEVATSAVVGEAIPALASLAGGIGDPAVRHKGTIGGSLANNDPTA 120 Query: 121 DYPAAVLALGATIVTNKRRLKAEEYFQGLFSTALEADEIITKVMFPLPKKAAYVKFRNQA 180 DYPAAVLALGATIVTNKRRLKAEEY QGLF TALEADEIITKVMFPLPKKAAY+KFRNQA Sbjct: 121 DYPAAVLALGATIVTNKRRLKAEEYLQGLFRTALEADEIITKVMFPLPKKAAYIKFRNQA 180 Query: 181 SRYALVGVFVAKRPSDVRVAVTGAGSDGVFRVTAFEDALKKRFSHKVLDGIAVSADGLNS 240 SRYALVGVFVA+RPSDVRVAVTGAGS+GVFRVTAFE+ALKKRFS K LDGI V A+GLNS Sbjct: 181 SRYALVGVFVARRPSDVRVAVTGAGSEGVFRVTAFEEALKKRFSAKALDGIEVPAEGLNS 240 Query: 241 DLHGSAEYRAHLIGVLTRRAVETANAKD 268 D+HGSAEYRAHLIGVLTRRAV+ ANAK+ Sbjct: 241 DIHGSAEYRAHLIGVLTRRAVDAANAKE 268 >ref|ZP_08630540.1| carbon monoxide dehydrogenase medium chain [Bradyrhizobiaceae bacterium SG-6C] gb|EGP06919.1| carbon monoxide dehydrogenase medium chain [Bradyrhizobiaceae bacterium SG-6C] Length = 267 Score = 489 bits (1258), Expect = e-136, Method: Compositional matrix adjust. Identities = 239/267 (89%), Positives = 254/267 (95%) Query: 1 MYEFKYHRPGTVRQAANLLVKNEDAKLIAGGHTLVPVMKQRLASPPHLVDLSHIEGLDTI 60 MY+FKYHRPGTVRQAANLLVKNEDAKLIAGGHTLVPVMKQRLASPPHLVDLSHIEGL+TI Sbjct: 1 MYDFKYHRPGTVRQAANLLVKNEDAKLIAGGHTLVPVMKQRLASPPHLVDLSHIEGLNTI 60 Query: 61 EMKGRSLVIGATAKHAEVANSAVVGEAIPALAELAGLIGDPAVRHRGTIGGSLANNDPTA 120 EMKGRSLVIGATA H EVANSA+VGEAIPALAELAGLIGDPAVRH+GTIGGSLANNDPTA Sbjct: 61 EMKGRSLVIGATATHYEVANSAIVGEAIPALAELAGLIGDPAVRHKGTIGGSLANNDPTA 120 Query: 121 DYPAAVLALGATIVTNKRRLKAEEYFQGLFSTALEADEIITKVMFPLPKKAAYVKFRNQA 180 DYPAAV+ALGATIVTNKR+LK EE+FQGLF+TALE DEIIT+VMFPLPKKAAY KFRNQA Sbjct: 121 DYPAAVMALGATIVTNKRKLKPEEFFQGLFTTALEPDEIITRVMFPLPKKAAYQKFRNQA 180 Query: 181 SRYALVGVFVAKRPSDVRVAVTGAGSDGVFRVTAFEDALKKRFSHKVLDGIAVSADGLNS 240 SRYALVGVFVA+RPSDVRVAVTGAG DGVFRVT FE+ALKKRFS K LDG+ V+ADGLNS Sbjct: 181 SRYALVGVFVARRPSDVRVAVTGAGGDGVFRVTEFEEALKKRFSAKSLDGLTVAADGLNS 240 Query: 241 DLHGSAEYRAHLIGVLTRRAVETANAK 267 D+HGSAEYRAHLIGVL RRAV+ A AK Sbjct: 241 DIHGSAEYRAHLIGVLARRAVDAATAK 267 >ref|YP_004107894.1| FAD-binding molybdopterin dehydrogenase protein [Rhodopseudomonas palustris DX-1] gb|ADU43161.1| molybdopterin dehydrogenase FAD-binding protein [Rhodopseudomonas palustris DX-1] Length = 268 Score = 486 bits (1252), Expect = e-135, Method: Compositional matrix adjust. Identities = 236/267 (88%), Positives = 254/267 (95%) Query: 1 MYEFKYHRPGTVRQAANLLVKNEDAKLIAGGHTLVPVMKQRLASPPHLVDLSHIEGLDTI 60 MYEFKYHRPGTVRQAANLL+KNEDAKLIAGGHTL+PVMKQRLA+PPHLVDLSHIEGL I Sbjct: 1 MYEFKYHRPGTVRQAANLLLKNEDAKLIAGGHTLLPVMKQRLAAPPHLVDLSHIEGLSGI 60 Query: 61 EMKGRSLVIGATAKHAEVANSAVVGEAIPALAELAGLIGDPAVRHRGTIGGSLANNDPTA 120 EMKGRSLVIGATA HAEVANSA+VGEAIPALAELA LIGDPAVRH+GTIGGSLANNDPTA Sbjct: 61 EMKGRSLVIGATATHAEVANSAIVGEAIPALAELASLIGDPAVRHKGTIGGSLANNDPTA 120 Query: 121 DYPAAVLALGATIVTNKRRLKAEEYFQGLFSTALEADEIITKVMFPLPKKAAYVKFRNQA 180 DYPAAVLALGAT+VTNKR+LKAEE+FQG++STALE DEIITKV FPLPKKAAY+KFRNQA Sbjct: 121 DYPAAVLALGATVVTNKRKLKAEEFFQGMYSTALEPDEIITKVQFPLPKKAAYIKFRNQA 180 Query: 181 SRYALVGVFVAKRPSDVRVAVTGAGSDGVFRVTAFEDALKKRFSHKVLDGIAVSADGLNS 240 SRYALVGVFVA+RPSDVRVAVTGAG+DGVFRVT FE+ALK RF+ K LDG+ VSADGLNS Sbjct: 181 SRYALVGVFVARRPSDVRVAVTGAGADGVFRVTQFEEALKARFNSKALDGLHVSADGLNS 240 Query: 241 DLHGSAEYRAHLIGVLTRRAVETANAK 267 DLHGSAEYRAHLIGVLT+RAV+ AN K Sbjct: 241 DLHGSAEYRAHLIGVLTKRAVDAANGK 267 >ref|YP_001993296.1| molybdopterin dehydrogenase [Rhodopseudomonas palustris TIE-1] gb|ACF02821.1| molybdopterin dehydrogenase FAD-binding [Rhodopseudomonas palustris TIE-1] Length = 268 Score = 482 bits (1241), Expect = e-134, Method: Compositional matrix adjust. Identities = 233/267 (87%), Positives = 254/267 (95%) Query: 1 MYEFKYHRPGTVRQAANLLVKNEDAKLIAGGHTLVPVMKQRLASPPHLVDLSHIEGLDTI 60 MYEFKYHRPGTVRQAANLL+KNEDAKLIAGGHTL+PVMKQRLA+PPHL+DLSHIEGL I Sbjct: 1 MYEFKYHRPGTVRQAANLLLKNEDAKLIAGGHTLLPVMKQRLAAPPHLIDLSHIEGLSGI 60 Query: 61 EMKGRSLVIGATAKHAEVANSAVVGEAIPALAELAGLIGDPAVRHRGTIGGSLANNDPTA 120 EMKGRSLVIGATA HAEVANSA+VGEAIPALAELA LIGDPAVRH+GTIGGSLANNDPTA Sbjct: 61 EMKGRSLVIGATATHAEVANSAIVGEAIPALAELASLIGDPAVRHKGTIGGSLANNDPTA 120 Query: 121 DYPAAVLALGATIVTNKRRLKAEEYFQGLFSTALEADEIITKVMFPLPKKAAYVKFRNQA 180 DYPAAVLA+GAT+VTNKR+LKAEE+FQG++STALE DEIITKV FPLPKKAAY+KFRNQA Sbjct: 121 DYPAAVLAVGATVVTNKRKLKAEEFFQGMYSTALEPDEIITKVQFPLPKKAAYIKFRNQA 180 Query: 181 SRYALVGVFVAKRPSDVRVAVTGAGSDGVFRVTAFEDALKKRFSHKVLDGIAVSADGLNS 240 SRYALVGVFVA+RPSDV VAVTGAG+DGVFRVT FE+ALK RF+ KV+DG+ VSADGLNS Sbjct: 181 SRYALVGVFVARRPSDVGVAVTGAGADGVFRVTQFEEALKARFNSKVIDGLHVSADGLNS 240 Query: 241 DLHGSAEYRAHLIGVLTRRAVETANAK 267 DLHGSAEYRAHLIGVLT+RAV+ AN K Sbjct: 241 DLHGSAEYRAHLIGVLTKRAVDAANGK 267