BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0051.0011.p (163 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001204903.1| putative carbon-monoxide dehydrogenase small... 324 3e-87 ref|YP_001241205.1| putative carbon-monoxide dehydrogenase small... 323 4e-87 ref|NP_772305.1| carbon monoxide dehydrogenase small subunit [Br... 321 3e-86 emb|CAA12063.1| putative carbon monoxide dehydrogenase small sub... 319 1e-85 ref|NP_949140.1| carbon-monoxide dehydrogenase small subunit [Rh... 315 1e-84 >ref|YP_001204903.1| putative carbon-monoxide dehydrogenase small subunit, coxS-like protein [Bradyrhizobium sp. ORS 278] emb|CAL76666.1| putative carbon-monoxide dehydrogenase small subunit, coxS-like protein [Bradyrhizobium sp. ORS 278] Length = 161 Score = 324 bits (830), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 156/161 (96%), Positives = 158/161 (98%) Query: 3 MAKISMIVNGNPVNANVDPRTLLVQFLRENLRLTGTHVGCDTSQCGACVVHLDGKAVKSC 62 MAKISMIVNGNPV ANVDPRTLLVQFLRENLRLTGTHVGCDTSQCGACVVHLDGKAVKSC Sbjct: 1 MAKISMIVNGNPVTANVDPRTLLVQFLRENLRLTGTHVGCDTSQCGACVVHLDGKAVKSC 60 Query: 63 TTLAVMADGHEVKTIEGLAADGAPLHPMQEAFREHHGLQCGFCTPGMIMTAVDLVHRKGH 122 TTLAVMADGHEV+TIEGLAADGAPLHPMQEAFREHHGLQCGFCTPGMIMTAVDLVHRKGH Sbjct: 61 TTLAVMADGHEVRTIEGLAADGAPLHPMQEAFREHHGLQCGFCTPGMIMTAVDLVHRKGH 120 Query: 123 ELSDEVIREELEGNLCRCTGYQNIVASIAAGAKAMAKSDLA 163 ELS+E IREELEGNLCRCTGYQNIV SIAAGAKAMAKSDLA Sbjct: 121 ELSEETIREELEGNLCRCTGYQNIVQSIAAGAKAMAKSDLA 161 >ref|YP_001241205.1| putative carbon-monoxide dehydrogenase small subunit, coxS-like protein [Bradyrhizobium sp. BTAi1] gb|ABQ37299.1| putative carbon-monoxide dehydrogenase small subunit, coxS-like protein [Bradyrhizobium sp. BTAi1] Length = 161 Score = 323 bits (829), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 156/161 (96%), Positives = 159/161 (98%) Query: 3 MAKISMIVNGNPVNANVDPRTLLVQFLRENLRLTGTHVGCDTSQCGACVVHLDGKAVKSC 62 MAKISMIVNGNPV ANVDPRTLLVQFLRENLRLTGTHVGCDTSQCGACVVHLDGKAVKSC Sbjct: 1 MAKISMIVNGNPVTANVDPRTLLVQFLRENLRLTGTHVGCDTSQCGACVVHLDGKAVKSC 60 Query: 63 TTLAVMADGHEVKTIEGLAADGAPLHPMQEAFREHHGLQCGFCTPGMIMTAVDLVHRKGH 122 TTLAVMADGHEV+TIEGLAADGAPLHPMQEAFREHHGLQCGFCTPGMIMTAVDLVHRKGH Sbjct: 61 TTLAVMADGHEVRTIEGLAADGAPLHPMQEAFREHHGLQCGFCTPGMIMTAVDLVHRKGH 120 Query: 123 ELSDEVIREELEGNLCRCTGYQNIVASIAAGAKAMAKSDLA 163 +LS+EVIREELEGNLCRCTGYQNIV SIAAGAKAMAKSDLA Sbjct: 121 DLSEEVIREELEGNLCRCTGYQNIVQSIAAGAKAMAKSDLA 161 >ref|NP_772305.1| carbon monoxide dehydrogenase small subunit [Bradyrhizobium japonicum USDA 110] dbj|BAC50930.1| cooxS [Bradyrhizobium japonicum USDA 110] Length = 163 Score = 321 bits (822), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 153/163 (93%), Positives = 159/163 (97%) Query: 1 VLMAKISMIVNGNPVNANVDPRTLLVQFLRENLRLTGTHVGCDTSQCGACVVHLDGKAVK 60 +LMAKIS+IVNGNPV ANVDPRTLLVQFLRENLRLTGTHVGCDTSQCGACVVHLDGKAVK Sbjct: 1 MLMAKISLIVNGNPVTANVDPRTLLVQFLRENLRLTGTHVGCDTSQCGACVVHLDGKAVK 60 Query: 61 SCTTLAVMADGHEVKTIEGLAADGAPLHPMQEAFREHHGLQCGFCTPGMIMTAVDLVHRK 120 SCTTLAVMADGHEVKTIEGLAADGAPLHPMQEAFREHHGLQCGFCTPGMIMTA+D+VHRK Sbjct: 61 SCTTLAVMADGHEVKTIEGLAADGAPLHPMQEAFREHHGLQCGFCTPGMIMTAIDIVHRK 120 Query: 121 GHELSDEVIREELEGNLCRCTGYQNIVASIAAGAKAMAKSDLA 163 GHE+ D IREELEGNLCRCTGYQNIVASI+AGAKAMAKSDLA Sbjct: 121 GHEVDDHTIREELEGNLCRCTGYQNIVASISAGAKAMAKSDLA 163 >emb|CAA12063.1| putative carbon monoxide dehydrogenase small subunit [Bradyrhizobium japonicum USDA 110] Length = 161 Score = 319 bits (817), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 152/161 (94%), Positives = 157/161 (97%) Query: 3 MAKISMIVNGNPVNANVDPRTLLVQFLRENLRLTGTHVGCDTSQCGACVVHLDGKAVKSC 62 MAKIS+IVNGNPV ANVDPRTLLVQFLRENLRLTGTHVGCDTSQCGACVVHLDGKAVKSC Sbjct: 1 MAKISLIVNGNPVTANVDPRTLLVQFLRENLRLTGTHVGCDTSQCGACVVHLDGKAVKSC 60 Query: 63 TTLAVMADGHEVKTIEGLAADGAPLHPMQEAFREHHGLQCGFCTPGMIMTAVDLVHRKGH 122 TTLAVMADGHEVKTIEGLAADGAPLHPMQEAFREHHGLQCGFCTPGMIMTA+D+VHRKGH Sbjct: 61 TTLAVMADGHEVKTIEGLAADGAPLHPMQEAFREHHGLQCGFCTPGMIMTAIDIVHRKGH 120 Query: 123 ELSDEVIREELEGNLCRCTGYQNIVASIAAGAKAMAKSDLA 163 E+ D IREELEGNLCRCTGYQNIVASI+AGAKAMAKSDLA Sbjct: 121 EVDDHTIREELEGNLCRCTGYQNIVASISAGAKAMAKSDLA 161 >ref|NP_949140.1| carbon-monoxide dehydrogenase small subunit [Rhodopseudomonas palustris CGA009] ref|YP_001993297.1| (2Fe-2S)-binding domain-containing protein [Rhodopseudomonas palustris TIE-1] emb|CAE29244.1| carbon-monoxide dehydrogenase small subunit [Rhodopseudomonas palustris CGA009] gb|ACF02822.1| (2Fe-2S)-binding domain protein [Rhodopseudomonas palustris TIE-1] Length = 161 Score = 315 bits (808), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 151/159 (94%), Positives = 154/159 (96%) Query: 3 MAKISMIVNGNPVNANVDPRTLLVQFLRENLRLTGTHVGCDTSQCGACVVHLDGKAVKSC 62 MAKIS+IVNGNPV ANVDPRTLLVQFLRENLRLTGTHVGCDTSQCGACVVHLDGKAVKSC Sbjct: 1 MAKISLIVNGNPVTANVDPRTLLVQFLRENLRLTGTHVGCDTSQCGACVVHLDGKAVKSC 60 Query: 63 TTLAVMADGHEVKTIEGLAADGAPLHPMQEAFREHHGLQCGFCTPGMIMTAVDLVHRKGH 122 TTLAVMADGHEV TIEGLAADGAPLHPMQEAFREHHGLQCGFCTPGMIMTAVD+VHRKGH Sbjct: 61 TTLAVMADGHEVTTIEGLAADGAPLHPMQEAFREHHGLQCGFCTPGMIMTAVDMVHRKGH 120 Query: 123 ELSDEVIREELEGNLCRCTGYQNIVASIAAGAKAMAKSD 161 +LSDE IREELEGNLCRCTGYQNIV SIAAGAKAMA SD Sbjct: 121 DLSDETIREELEGNLCRCTGYQNIVVSIAAGAKAMANSD 159