BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0051.0002.p (348 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_550636.1| inner-membrane translocator [Polaromonas sp. JS... 249 7e-64 ref|YP_004416473.1| high-affinity branched-chain amino acid tran... 246 4e-63 ref|YP_003496710.1| branched-chain amino acid ABC transporter pe... 246 5e-63 ref|YP_002354079.1| inner-membrane translocator [Thauera sp. MZ1... 243 3e-62 ref|ZP_08272937.1| Branched-chain amino acid transport system pe... 243 3e-62 >ref|YP_550636.1| inner-membrane translocator [Polaromonas sp. JS666] gb|ABE45738.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Polaromonas sp. JS666] Length = 349 Score = 249 bits (635), Expect = 7e-64, Method: Compositional matrix adjust. Identities = 143/348 (41%), Positives = 201/348 (57%), Gaps = 1/348 (0%) Query: 1 MRTGDYKQSYGELVALIDSPPVWLWSAVLLLALIAAPHLLNSYALSFLMIILITVTGALG 60 MR G K+SY AL DS +W VL L L A P + + Y L ++ I + G Sbjct: 1 MRIGSAKESYAGDTALFDSTTQRVWMGVLALTLCAFPFVASEYWLYLACLVAINIASTSG 60 Query: 61 LNILTGYTGLISLGHVGFLVTGAYAYAVLVSKYHMPPSVGFLGAGVVPALASLIVGAPSL 120 LNILTGYTGL+SLG F+ GAY A+L ++ +P L G V LA ++VG PSL Sbjct: 61 LNILTGYTGLVSLGQAAFMGLGAYTVAILQIRFGLPFVGNLLAGGCVAMLAGVLVGLPSL 120 Query: 121 RLKGLYLAITTLAFSFIINTVILEMRWLTNGARGIQVQRPEIFGISFDGDAAFTYLCLGI 180 R+KGLYLAI T+A I + + LT G+ G+ V FGI D ++ + + Sbjct: 121 RVKGLYLAIATIAAGVIAHFIFSHFSSLTGGSSGLTVPPARFFGIELDNSFKLYWVIVPV 180 Query: 181 AGLTLFATLNIRRSRIGRAFVAIRDNDTAARVMGINLHAYKLFAFITSAFITGIAGALYG 240 GL L +N+ R+RIGRAF+AIRD D +A V+GI+L YKL +F S+F G+AG L+ Sbjct: 181 MGLMLLGAVNLFRTRIGRAFIAIRDRDISAEVLGISLLRYKLLSFAISSFYAGVAGGLFA 240 Query: 241 IYLSFVSVEGFPFLLSIEALAILIVGGLGSALGAVLGTILIVLLPEATRIVFSLFS-AQM 299 + VS E FP L+SI LA +IVGG+GS LG++LG + + L+PE +++ A Sbjct: 241 YFFRAVSPESFPLLMSIFFLAAVIVGGMGSILGSILGAVFMTLVPELLKLIVGWLPLASF 300 Query: 300 DATFTTGAQELKSMLYGLVIILFLRFQPRGLVGAWHDIRRTWVHWPLR 347 ++++++GL+I+LFL F+P GL W IRR + WP R Sbjct: 301 GGNAALILSPVRTIVFGLMIVLFLIFEPHGLAEVWRRIRRLFHLWPFR 348 >ref|YP_004416473.1| high-affinity branched-chain amino acid transport system permease protein [Pusillimonas sp. T7-7] gb|AEC19849.1| high-affinity branched-chain amino acid transport system permease protein [Pusillimonas sp. T7-7] Length = 345 Score = 246 bits (629), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 145/347 (41%), Positives = 206/347 (59%), Gaps = 3/347 (0%) Query: 1 MRTGDYKQSYGELVALIDSPPVWLWSAVLLLALIAAPHLLNSYALSFLMIILITVTGALG 60 MR KQ+Y AL D+ W V LAL+ P L N Y L ++ I A G Sbjct: 1 MRIATAKQNYMADEALFDTATQRAWMLVFGLALLLYPFLANDYWLYLACLVAIHAASATG 60 Query: 61 LNILTGYTGLISLGHVGFLVTGAYAYAVLVSKYHMPPSVGFLGAGVVPALASLIVGAPSL 120 LNILTGYTGL+SLG F+ GAY AVL +Y P + + AGVV L L+VG PSL Sbjct: 61 LNILTGYTGLVSLGQAAFMGLGAYTVAVLEQRYGTPFLLNLIVAGVVAMLGGLVVGIPSL 120 Query: 121 RLKGLYLAITTLAFSFIINTVILEMRWLTNGARGIQVQRPEIFGISFDGDAAFTYLCLGI 180 R+KGLYLAI T+A SFI++ + + + T G+ G+ V P +FG++ D +L + + Sbjct: 121 RVKGLYLAIVTIAASFIVHFIFGNLAF-TGGSGGMTVPPPVLFGVALDTSFKIYWLIVPV 179 Query: 181 AGLTLFATLNIRRSRIGRAFVAIRDNDTAARVMGINLHAYKLFAFITSAFITGIAGALYG 240 L + N+ R+R+GRAF+AIRD D +A V+GI L YKL +F S+F G+AG L+ Sbjct: 180 TILMVLGAANLFRTRVGRAFIAIRDRDISAEVLGIPLLRYKLLSFGLSSFYAGVAGGLWA 239 Query: 241 IYLSFVSVEGFPFLLSIEALAILIVGGLGSALGAVLGTILIVLLPEATRIVFSLFSAQMD 300 + V+ E FP +LSI LA +IVGG+GS LGA+LG + ++PE R+V L + D Sbjct: 240 YFFRVVTPESFPLILSIFFLAAIIVGGMGSILGAILGAAFMTMVPEVLRLVIGLLPIEGD 299 Query: 301 ATFTTGAQELKSMLYGLVIILFLRFQPRGLVGAWHDIRRTWVHWPLR 347 ++++++GL+I++FL F+P+GL W +RR + WP R Sbjct: 300 T--LRYVSPVRTIVFGLLIVVFLIFEPQGLAEIWRRVRRFFHLWPFR 344 >ref|YP_003496710.1| branched-chain amino acid ABC transporter permease [Deferribacter desulfuricans SSM1] dbj|BAI80954.1| branched-chain amino acid ABC transporter, permease [Deferribacter desulfuricans SSM1] Length = 350 Score = 246 bits (627), Expect = 5e-63, Method: Compositional matrix adjust. Identities = 144/351 (41%), Positives = 208/351 (59%), Gaps = 7/351 (1%) Query: 1 MRTGDYKQSYGELVALIDSP--PVWLWSAVLLLALIAAPHLLNSYALSFLMIILITVTGA 58 + G++K +Y E A+ + + ++ +++L L+ P + N Y L +I I+V GA Sbjct: 4 VNCGNFKSNYKEDFAIYQTKFAKIMIYGFIIILFLL--PVISNDYVLYLFNLIFISVIGA 61 Query: 59 LGLNILTGYTGLISLGHVGFLVTGAYAYAVLVSKYHMPPSVGFLGAGVVPALASLIVGAP 118 +GLNILTG TGLISLGH F+ GAYA + + H+ L G++ AL I G P Sbjct: 62 VGLNILTGATGLISLGHGAFIGVGAYAAGYIFNTLHINFLFAILFGGIMAALVGSIFGIP 121 Query: 119 SLRLKGLYLAITTLAFSFIINTVILEMRWLTNGARGIQVQRPEIFGISFDGDAAFTYLCL 178 SLRLKGLYL+I TLA FII + + +T G G+ V IFGI D D F YL L Sbjct: 122 SLRLKGLYLSIATLAAQFIIEFFFVRLESITGGVTGLSVDYASIFGIEIDNDFKFYYLGL 181 Query: 179 GIA-GLTLFATLNIRRSRIGRAFVAIRDNDTAARVMGINLHAYKLFAFITSAFITGIAGA 237 +TLFA NI R++IGRAF++IRDN AA VMG+N+ YK+ +F S+F G+AG Sbjct: 182 VFCIVMTLFAA-NIMRTKIGRAFLSIRDNYIAAEVMGVNIFQYKILSFAISSFYAGVAGG 240 Query: 238 LYGIYLSFVSVEGFPFLLSIEALAILIVGGLGSALGAVLGTILIVLLPEATRIVFSLFSA 297 L+ Y + ++ E F +SI+ L+++I+GGLG LG++ G + + +LPE+ + V S + + Sbjct: 241 LWTFYTTIITPEHFTIGVSIQYLSMIIIGGLGKVLGSIFGAVFMTILPESIKFV-SDYLS 299 Query: 298 QMDATFTTGAQELKSMLYGLVIILFLRFQPRGLVGAWHDIRRTWVHWPLRY 348 Q T ++ ++GLVIILFL F+P GL W I+ W WP Y Sbjct: 300 QYYPNITQLFASIREGVFGLVIILFLMFEPEGLYRRWKLIKAYWKLWPFSY 350 >ref|YP_002354079.1| inner-membrane translocator [Thauera sp. MZ1T] gb|ACK53183.1| inner-membrane translocator [Thauera sp. MZ1T] Length = 346 Score = 243 bits (620), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 145/347 (41%), Positives = 201/347 (57%), Gaps = 2/347 (0%) Query: 1 MRTGDYKQSYGELVALIDSPPVWLWSAVLLLALIAAPHLLNSYALSFLMIILITVTGALG 60 MR G + SY AL DS W A+L +ALI P L + Y L ++ I + G Sbjct: 1 MRIGTARSSYRHDEALFDSRTQHAWLAILAVALIGFPFLADEYWLYLACLVAINIASTTG 60 Query: 61 LNILTGYTGLISLGHVGFLVTGAYAYAVLVSKYHMPPSVGFLGAGVVPALASLIVGAPSL 120 LNILTGYTGL+SLG F+ GAY A L K P + L G V L L+VG PSL Sbjct: 61 LNILTGYTGLVSLGQAAFMGIGAYTVAALEQKLGAPVLLNLLAGGFVAMLGGLVVGLPSL 120 Query: 121 RLKGLYLAITTLAFSFIINTVILEMRWLTNGARGIQVQRPEIFGISFDGDAAFTYLCLGI 180 R+KGLYLAI T+A S +++ V +T G GI + EI G+SFD +L + I Sbjct: 121 RVKGLYLAIATIAASVVLHFVFANWHAVTGGHAGITLVPAEILGLSFDTSFRLYWLFVPI 180 Query: 181 AGLTLFATLNIRRSRIGRAFVAIRDNDTAARVMGINLHAYKLFAFITSAFITGIAGALYG 240 L + N+ R+RIGRAF+AIRD D +A V+GI L YKL +F S+F G+AG ++ Sbjct: 181 TILMVAGAANLFRTRIGRAFIAIRDRDISAEVLGIPLLRYKLLSFGLSSFYAGVAGGMWA 240 Query: 241 IYLSFVSVEGFPFLLSIEALAILIVGGLGSALGAVLGTILIVLLPEATRIVFSLFSAQMD 300 + V+ E FP +LSI LA +IVGG+G+ LGA+LG + + ++PEA ++V D Sbjct: 241 YFFRVVTPESFPLILSIFFLAAVIVGGMGTILGAILGAVFMTMVPEALKLVVGWLPLSAD 300 Query: 301 ATFTTGAQELKSMLYGLVIILFLRFQPRGLVGAWHDIRRTWVHWPLR 347 AT ++++++G++I+ FL F+P GL W IRR + WP R Sbjct: 301 ATLIL--SPVRTIVFGVLIVGFLVFEPLGLQEIWRRIRRFFHLWPFR 345 >ref|ZP_08272937.1| Branched-chain amino acid transport system permease protein livM [Oxalobacteraceae bacterium IMCC9480] gb|EGF33559.1| Branched-chain amino acid transport system permease protein livM [Oxalobacteraceae bacterium IMCC9480] Length = 346 Score = 243 bits (620), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 141/347 (40%), Positives = 200/347 (57%), Gaps = 2/347 (0%) Query: 1 MRTGDYKQSYGELVALIDSPPVWLWSAVLLLALIAAPHLLNSYALSFLMIILITVTGALG 60 MR G KQSY AL DS P W VLLLAL+A P + N Y L ++ + + G Sbjct: 1 MRIGSAKQSYLADQALFDSTPQRAWFGVLLLALVAFPFMANEYWLYLACLVGLNIVSTTG 60 Query: 61 LNILTGYTGLISLGHVGFLVTGAYAYAVLVSKYHMPPSVGFLGAGVVPALASLIVGAPSL 120 LN+LTGYTGL+SLG F+ GAY A+L +Y P + L G+V L ++VG PSL Sbjct: 61 LNLLTGYTGLVSLGQAAFMGLGAYTVAILQVRYGSPFLLNLLAGGIVAMLGGILVGLPSL 120 Query: 121 RLKGLYLAITTLAFSFIINTVILEMRWLTNGARGIQVQRPEIFGISFDGDAAFTYLCLGI 180 R+KGLYLAI T+A F+ + + +T G G+ V +FG D ++ I Sbjct: 121 RVKGLYLAIATIAAGFMTHFLFAHWASITGGNGGMTVPPARLFGAELDTSFRLYWVIAPI 180 Query: 181 AGLTLFATLNIRRSRIGRAFVAIRDNDTAARVMGINLHAYKLFAFITSAFITGIAGALYG 240 L +F N+ R+RIGRAF+AIRD D +A V+GI L YKL +F S+F G+AG L+ Sbjct: 181 MILMVFGAANLFRTRIGRAFIAIRDRDISAAVLGIPLMPYKLMSFAISSFYAGVAGGLFA 240 Query: 241 IYLSFVSVEGFPFLLSIEALAILIVGGLGSALGAVLGTILIVLLPEATRIVFSLFSAQMD 300 + V+ E FP L+SI LA +IVGG+G+ G++ G I + L+PE +++ + Sbjct: 241 YFFRVVTPESFPLLMSIFFLAAVIVGGMGTISGSIFGAIFMTLVPELLKLIVGWLPLGDN 300 Query: 301 ATFTTGAQELKSMLYGLVIILFLRFQPRGLVGAWHDIRRTWVHWPLR 347 AT ++++++G +I+LFL F+P GL W IRR + WP R Sbjct: 301 ATLVL--SPVRTIVFGSMIVLFLIFEPHGLAEIWRRIRRLFHLWPFR 345