BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0050.0058.p (522 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001238978.1| putative D-galactarate dehydratase/Altronate... 610 e-172 ref|YP_001204655.1| putative D-galactarate dehydratase/Altronate... 607 e-171 ref|ZP_02884033.1| Galactarate dehydratase [Burkholderia gramini... 605 e-171 ref|YP_003911131.1| Galactarate dehydratase [Burkholderia sp. CC... 605 e-171 ref|YP_003777262.1| altronate hydrolase [Herbaspirillum seropedi... 604 e-170 >ref|YP_001238978.1| putative D-galactarate dehydratase/Altronate hydrolase [Bradyrhizobium sp. BTAi1] gb|ABQ35072.1| putative D-galactarate dehydratase/Altronate hydrolase [Bradyrhizobium sp. BTAi1] Length = 507 Score = 610 bits (1574), Expect = e-172, Method: Compositional matrix adjust. Identities = 304/496 (61%), Positives = 369/496 (74%), Gaps = 12/496 (2%) Query: 32 ILLNDADDVLIALRRISPGEIVSEGVVAIDPIPAGHKIARRPIDAGAVVRRYNSVIGVAS 91 I L+ D VLIA + PG V++GVV +D IPAGHK+A RPI G VRRY +IG A+ Sbjct: 7 IRLHPEDSVLIARSSLPPGLTVADGVVTVDRIPAGHKVAVRPIALGEPVRRYGQIIGFAT 66 Query: 92 APIARGGHIHVQNLAMSTFAQGHTFGEDIRPTPVASVQRTFDGYVRADGRVATRNYIGIL 151 APIA G H+H QN M FA+ + +G +++PTP + TF+G R DGRVATRNYIGIL Sbjct: 67 APIAPGQHVHTQNCGMGDFAKDYAYGVEVKPTPNFDLPATFEGIRRPDGRVATRNYIGIL 126 Query: 152 TSVNCSATTARMIADHFK-------GRLSDYPNIDGVVALTHKGGCGLDARIEGIEALRR 204 TSVNCSA A ++AD FK L+DYPN+DGVVALTHK GCG+ E ++ LRR Sbjct: 127 TSVNCSAHVAGLVADVFKRNPFTGDNPLADYPNVDGVVALTHKTGCGMTLD-EPLKLLRR 185 Query: 205 CIAGYAAHPNFAKVLMIGLGCEVTNLDGVLGGS--AGD--ALVIQQSGGTAATVRAGIER 260 + GYA H NF+ V+++GLGCE + G++ AG A+ IQ+ GGT TV AGI Sbjct: 186 TLGGYARHANFSAVIVLGLGCEANQIGGLMEEQKLAGRLRAMDIQEVGGTRKTVEAGIAF 245 Query: 261 IEASLERANNVQRTPVPASELKVALQCGGSDGYSGVSANAALGAAVDLIVAHGGTAILSE 320 ++ SL AN V+R VPASEL VALQCGGSDGYSG+SAN ALGAA DL+V HGGT ILSE Sbjct: 246 VKESLADANRVKRETVPASELTVALQCGGSDGYSGISANPALGAASDLLVRHGGTVILSE 305 Query: 321 TTECYGAEHLLTRRAVRRDVGEKLIARVKWWEQFAASHGMEINNNPSPGNKAGGLTNIIE 380 T E YGAEHLLTRRAV R+VGEKL++ ++WWE++ A G E+N NPSPGNKAGGLT I+E Sbjct: 306 TPETYGAEHLLTRRAVSREVGEKLVSLMRWWEEYTAREGAEMNANPSPGNKAGGLTTILE 365 Query: 381 KSLGAMAKGGTTNLVEVYDYAERVTEKGLVFMDAPAFDPVGATAQVAGGANVLCFTTGRG 440 KSLGAMAK G+TNLV+V YAE VT+KG VFMD P +DPV AT QVAGGAN++CFTTGRG Sbjct: 366 KSLGAMAKAGSTNLVDVLHYAEAVTKKGFVFMDTPGYDPVAATGQVAGGANLVCFTTGRG 425 Query: 441 SAFGCKPTPSLKLASNTPLYQRMPDDMDVNCGTLLDGTETIEEAGARIFDLILATASGTK 500 S FGCKP PS+KLA+NTP+Y+RM DDMDVNCGT+LDG ET++E G RIF+L+L TASG Sbjct: 426 SVFGCKPAPSIKLATNTPMYKRMEDDMDVNCGTILDGEETVQECGQRIFELMLKTASGQP 485 Query: 501 TASERLGYGEEEFSPW 516 T SE +G EF+PW Sbjct: 486 TKSESFDFGGAEFAPW 501 >ref|YP_001204655.1| putative D-galactarate dehydratase/Altronate hydrolase [Bradyrhizobium sp. ORS 278] emb|CAL76418.1| putative D-galactarate dehydratase/Altronate hydrolase [Bradyrhizobium sp. ORS 278] Length = 515 Score = 607 bits (1566), Expect = e-171, Method: Compositional matrix adjust. Identities = 306/513 (59%), Positives = 373/513 (72%), Gaps = 16/513 (3%) Query: 15 SSAREASAPPRDGKPSTILLNDADDVLIALRRISPGEIVSEGVVAIDPIPAGHKIARRPI 74 +S RE + P I L+ D VLIA + PG V+EGVV +D IPAGHK+A RPI Sbjct: 2 NSTRETAMAPA----PVIRLHPEDSVLIARASLPPGLAVTEGVVTVDRIPAGHKVAVRPI 57 Query: 75 DAGAVVRRYNSVIGVASAPIARGGHIHVQNLAMSTFAQGHTFGEDIRPTPVASVQRTFDG 134 G +RRY +IG A+APIA G H+H QN M FA+ + + D++PTP + TF+G Sbjct: 58 AQGEPIRRYGQIIGFATAPIAPGQHVHTQNCGMGDFAKDYAYSVDVKPTPNFDLPATFEG 117 Query: 135 YVRADGRVATRNYIGILTSVNCSATTARMIADHFKGR-------LSDYPNIDGVVALTHK 187 R DGRVATRNYIGILTSVNCSA A ++AD FK L+DYPN+DGVVALTHK Sbjct: 118 IRRPDGRVATRNYIGILTSVNCSAHVAGLVADVFKRNPFSGDDPLADYPNVDGVVALTHK 177 Query: 188 GGCGLDARIEGIEALRRCIAGYAAHPNFAKVLMIGLGCEVTNLDGVLGGS--AGD--ALV 243 GCG+ E ++ LRR + GYA H NF+ V+++GLGCE + G++ AG A+ Sbjct: 178 TGCGMTMD-EPLKLLRRTLGGYARHVNFSAVIVLGLGCEANQIGGLMEEQKLAGRLRAMD 236 Query: 244 IQQSGGTAATVRAGIERIEASLERANNVQRTPVPASELKVALQCGGSDGYSGVSANAALG 303 IQ+ GGT TV AGI ++ +L AN V+R VPASEL VALQCGGSDGYSG+SAN ALG Sbjct: 237 IQEVGGTRKTVEAGIAFVKEALADANKVKRETVPASELTVALQCGGSDGYSGISANPALG 296 Query: 304 AAVDLIVAHGGTAILSETTECYGAEHLLTRRAVRRDVGEKLIARVKWWEQFAASHGMEIN 363 AA DL+V HGGT ILSET E YGAEHLLTRRAV R+VGEKL++ ++WWE + A G E+N Sbjct: 297 AASDLLVRHGGTVILSETPETYGAEHLLTRRAVSREVGEKLVSLMRWWEDYTAREGAEMN 356 Query: 364 NNPSPGNKAGGLTNIIEKSLGAMAKGGTTNLVEVYDYAERVTEKGLVFMDAPAFDPVGAT 423 NPSPGNKAGGLT I+EKSLGAMAK G+TNLV+V YAE VT+KG VFMD P +DPV AT Sbjct: 357 ANPSPGNKAGGLTTILEKSLGAMAKAGSTNLVDVLHYAEAVTKKGFVFMDTPGYDPVAAT 416 Query: 424 AQVAGGANVLCFTTGRGSAFGCKPTPSLKLASNTPLYQRMPDDMDVNCGTLLDGTETIEE 483 QVAGGAN++CFTTGRGS FGCKP PS+KLA+NTP+Y+RM DDMDVNCGT+LDG E+++E Sbjct: 417 GQVAGGANLVCFTTGRGSVFGCKPAPSIKLATNTPMYKRMEDDMDVNCGTILDGEESVQE 476 Query: 484 AGARIFDLILATASGTKTASERLGYGEEEFSPW 516 G RIF+L+L TASG T SE +G EF+PW Sbjct: 477 CGQRIFELMLKTASGEPTKSESFDFGGAEFAPW 509 >ref|ZP_02884033.1| Galactarate dehydratase [Burkholderia graminis C4D1M] gb|EDT10693.1| Galactarate dehydratase [Burkholderia graminis C4D1M] Length = 515 Score = 605 bits (1560), Expect = e-171, Method: Compositional matrix adjust. Identities = 303/505 (60%), Positives = 366/505 (72%), Gaps = 13/505 (2%) Query: 30 STILLNDADDVLIALRRISPG-EIVSEGVVAIDPIPAGHKIARRPIDAGAVVRRYNSVIG 88 + I L+ DDV+IA R++ PG I +E +V IP GHKIA R I G V+RYN +IG Sbjct: 10 AIIRLHPGDDVIIATRQLLPGTRIDAEQLVVTGLIPPGHKIATRDIAKGEPVKRYNQIIG 69 Query: 89 VASAPIARGGHIHVQNLAMSTFAQGHTFGEDIRPTPVASVQRTFDGYVRADGRVATRNYI 148 VA IARG H+HVQNL MS FA+ H FG D +PT F G R DGR+ATRNYI Sbjct: 70 VAREAIARGQHVHVQNLGMSEFAREHVFGVDAQPTAYVKEPAHFMGIRRGDGRIATRNYI 129 Query: 149 GILTSVNCSATTARMIADHFK-----GRLSDYPNIDGVVALTHKGGCGLDARIEGIEALR 203 GILTSVNCSAT AR IADHF+ L+DYPN+DGV+ALTH GCG+D + EGI LR Sbjct: 130 GILTSVNCSATVARAIADHFRRDVHPDALADYPNVDGVIALTHGLGCGIDTQGEGIRILR 189 Query: 204 RCIAGYAAHPNFAKVLMIGLGCEVTNLDGVL-GGSAGDA------LVIQQSGGTAATVRA 256 R +AGYA HPNFA VL +GLGCE +DGVL G G + IQ SGGT T+ Sbjct: 190 RTLAGYAVHPNFASVLFVGLGCETNQIDGVLEAGGLGSSDLKLRSFTIQDSGGTRKTIER 249 Query: 257 GIERIEASLERANNVQRTPVPASELKVALQCGGSDGYSGVSANAALGAAVDLIVAHGGTA 316 GI ++ L AN +QR PVPAS L + LQCGGSDGYSG+SAN ALGAAVD +V HGGTA Sbjct: 250 GIAMVQEMLADANRIQRVPVPASHLSIGLQCGGSDGYSGISANPALGAAVDRVVRHGGTA 309 Query: 317 ILSETTECYGAEHLLTRRAVRRDVGEKLIARVKWWEQFAASHGMEINNNPSPGNKAGGLT 376 ILSET E YGAEHLLTRRAV VGEKL+AR+ WW+ + A +G ++NNPS GNKAGGLT Sbjct: 310 ILSETPEIYGAEHLLTRRAVSPAVGEKLLARIAWWQDYCARNGGALDNNPSAGNKAGGLT 369 Query: 377 NIIEKSLGAMAKGGTTNLVEVYDYAERVTEKGLVFMDAPAFDPVGATAQVAGGANVLCFT 436 I+EKSLGA+AKGGTTNLV+VY+YA+ V KGLVFMD+P +DPV AT QVA GANV+CFT Sbjct: 370 TILEKSLGAVAKGGTTNLVDVYEYAQPVAAKGLVFMDSPGYDPVSATGQVASGANVICFT 429 Query: 437 TGRGSAFGCKPTPSLKLASNTPLYQRMPDDMDVNCGTLLDGTETIEEAGARIFDLILATA 496 TGRGSA+GC P+PSLK A+N L++R DD+D+NCG ++DG+ +I+E G IF ++L A Sbjct: 430 TGRGSAYGCAPSPSLKFATNNTLWERQADDIDLNCGGVIDGSASIDELGEAIFQMMLDCA 489 Query: 497 SGTKTASERLGYGEEEFSPWDKGIM 521 SGT+T SE GYG+ EF PW G++ Sbjct: 490 SGTRTKSELHGYGQSEFVPWQVGVV 514 >ref|YP_003911131.1| Galactarate dehydratase [Burkholderia sp. CCGE1003] gb|ADN61840.1| Galactarate dehydratase [Burkholderia sp. CCGE1003] Length = 515 Score = 605 bits (1560), Expect = e-171, Method: Compositional matrix adjust. Identities = 304/506 (60%), Positives = 367/506 (72%), Gaps = 13/506 (2%) Query: 29 PSTILLNDADDVLIALRRISPG-EIVSEGVVAIDPIPAGHKIARRPIDAGAVVRRYNSVI 87 P I L+ DDV+IA R++ PG I +E +V +P GHKIA R I GA V+RYN +I Sbjct: 9 PQVIRLHPNDDVIIATRQLLPGTRIDAEQLVVTGLVPPGHKIATRDIAEGAPVKRYNQII 68 Query: 88 GVASAPIARGGHIHVQNLAMSTFAQGHTFGEDIRPTPVASVQRTFDGYVRADGRVATRNY 147 GVA IARG H+HV NL MS FA+ H FG D PT + F G R DGRVATRNY Sbjct: 69 GVAREAIARGQHVHVHNLGMSEFARDHAFGVDTHPTEYVAEPAHFMGIRRDDGRVATRNY 128 Query: 148 IGILTSVNCSATTARMIADHFK-----GRLSDYPNIDGVVALTHKGGCGLDARIEGIEAL 202 IGILTSVNCSAT AR IADHF+ L+ +PN+DGVVALTH GCG+D + EGI L Sbjct: 129 IGILTSVNCSATVARAIADHFRRDVRPEALAAFPNVDGVVALTHGLGCGIDMQGEGIAVL 188 Query: 203 RRCIAGYAAHPNFAKVLMIGLGCEVTNLDGVL--GGSAGDA-----LVIQQSGGTAATVR 255 RR +AGYA HPNFA VL +GLGCE +DGVL G AG A IQ SGGT T+ Sbjct: 189 RRTLAGYAVHPNFASVLFLGLGCETNQIDGVLDAAGPAGQAAKLRSFTIQDSGGTRKTIE 248 Query: 256 AGIERIEASLERANNVQRTPVPASELKVALQCGGSDGYSGVSANAALGAAVDLIVAHGGT 315 GI + L AN V+R PVPAS L V LQCGGSDGYSG+SAN ALGAAVD +V HGGT Sbjct: 249 RGIAMVNEMLADANRVERVPVPASHLCVGLQCGGSDGYSGISANPALGAAVDRLVRHGGT 308 Query: 316 AILSETTECYGAEHLLTRRAVRRDVGEKLIARVKWWEQFAASHGMEINNNPSPGNKAGGL 375 AILSET E YGAEHLLTRRAV + VGE+L+AR+ WW+ + +G ++NNPS GNKAGGL Sbjct: 309 AILSETPEVYGAEHLLTRRAVSQAVGERLLARIAWWQDYCTRNGGALDNNPSAGNKAGGL 368 Query: 376 TNIIEKSLGAMAKGGTTNLVEVYDYAERVTEKGLVFMDAPAFDPVGATAQVAGGANVLCF 435 T I+EKSLGA+AKGGTTNLVEVY+YA+R+ KG VFMD+P +DPV AT QVA GAN++CF Sbjct: 369 TTILEKSLGAVAKGGTTNLVEVYEYAQRIDAKGFVFMDSPGYDPVSATGQVASGANLICF 428 Query: 436 TTGRGSAFGCKPTPSLKLASNTPLYQRMPDDMDVNCGTLLDGTETIEEAGARIFDLILAT 495 TTGRGSA+GC P+PSLKLA+NT L++R DD+D+NCG ++DG+ +I+E G IF ++L Sbjct: 429 TTGRGSAYGCAPSPSLKLATNTALWERQEDDIDINCGGVVDGSASIDELGEAIFQMMLDC 488 Query: 496 ASGTKTASERLGYGEEEFSPWDKGIM 521 ASGT++ SE GYG+ EF PW G++ Sbjct: 489 ASGTRSKSELHGYGQNEFVPWQVGVV 514 >ref|YP_003777262.1| altronate hydrolase [Herbaspirillum seropedicae SmR1] gb|ADJ65354.1| altronate hydrolase (altronic acid hydratase) protein [Herbaspirillum seropedicae SmR1] Length = 511 Score = 604 bits (1558), Expect = e-170, Method: Compositional matrix adjust. Identities = 298/502 (59%), Positives = 367/502 (73%), Gaps = 13/502 (2%) Query: 32 ILLNDADDVLIALRRISPGEIVSE--GVVAIDPIPAGHKIARRPIDAGAVVRRYNSVIGV 89 I LN DDV+IA +++ G ++ + G+ IPAGHK+A R I AG V+RY +IG Sbjct: 8 IRLNPVDDVVIARQQLISGTVLQDEGGLKVQGLIPAGHKMATRAITAGEPVKRYGQIIGT 67 Query: 90 ASAPIARGGHIHVQNLAMSTFAQGHTFGEDIRPTPVASVQRTFDGYVRADGRVATRNYIG 149 AS IA G H+H NLAM+ F++ H FG D++P + TF G VR DGRVATRNYIG Sbjct: 68 ASQDIAPGQHVHTHNLAMAEFSREHHFGADVKPVDFVATPATFMGIVRPDGRVATRNYIG 127 Query: 150 ILTSVNCSATTARMIADHFKGR-----LSDYPNIDGVVALTHKGGCGLDARIEGIEALRR 204 +LTSVNCSAT AR IAD+F+ L+DYPNIDGVVALTH GC LD++ E ++ LRR Sbjct: 128 VLTSVNCSATAARAIADYFRRDIHPEVLADYPNIDGVVALTHGQGCALDSQGEPLQILRR 187 Query: 205 CIAGYAAHPNFAKVLMIGLGCEVTNLDGVLG------GSAGDALVIQQSGGTAATVRAGI 258 +AGYA HPNFA VL++GLGCE + G++ G IQ +GGTA TV GI Sbjct: 188 TLAGYATHPNFAAVLVVGLGCETNQISGLMESHNLKEGEYFHTFTIQGTGGTAKTVALGI 247 Query: 259 ERIEASLERANNVQRTPVPASELKVALQCGGSDGYSGVSANAALGAAVDLIVAHGGTAIL 318 E+I+ L +AN+++R PV A L + LQCGGSDGYSG++AN ALGAAVDL+V HGGTAIL Sbjct: 248 EKIKKMLPKANDIKREPVSAKHLTLGLQCGGSDGYSGITANPALGAAVDLLVRHGGTAIL 307 Query: 319 SETTECYGAEHLLTRRAVRRDVGEKLIARVKWWEQFAASHGMEINNNPSPGNKAGGLTNI 378 SET E YGAEHLLTRRAV +VGEKL+AR+ WWE++ A + E+NNNPS GNKAGGLT I Sbjct: 308 SETPEIYGAEHLLTRRAVSPEVGEKLLARIAWWEEYCAKNDAEMNNNPSAGNKAGGLTTI 367 Query: 379 IEKSLGAMAKGGTTNLVEVYDYAERVTEKGLVFMDAPAFDPVGATAQVAGGANVLCFTTG 438 +EKSLGA+AKGGTTNLV+VY YAE VT +G VFMD P +DP+ AT QVAGGAN++CFTTG Sbjct: 368 LEKSLGAVAKGGTTNLVDVYKYAEAVTARGFVFMDTPGYDPISATGQVAGGANMICFTTG 427 Query: 439 RGSAFGCKPTPSLKLASNTPLYQRMPDDMDVNCGTLLDGTETIEEAGARIFDLILATASG 498 RGSA+GC P PSLKLA+NT L+QR +DMD+NCG + DG T +E G R F +IL TASG Sbjct: 428 RGSAYGCAPAPSLKLATNTALWQRQEEDMDINCGEIADGNVTPQEIGERFFQMILDTASG 487 Query: 499 TKTASERLGYGEEEFSPWDKGI 520 KT SE GYG++EF PW G+ Sbjct: 488 KKTKSELHGYGQDEFVPWHIGV 509