BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0050.0023.p         (140 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_01046653.1| hypothetical protein NB311A_18531 [Nitrobacte...   205   2e-51
ref|NP_770624.1| hypothetical protein blr3984 [Bradyrhizobium ja...   205   2e-51
ref|YP_577786.1| hypothetical protein Nham_2544 [Nitrobacter ham...   203   9e-51
ref|YP_782178.1| hypothetical protein RPE_3264 [Rhodopseudomonas...   200   5e-50
ref|YP_569403.1| hypothetical protein RPD_2267 [Rhodopseudomonas...   199   2e-49

>ref|ZP_01046653.1| hypothetical protein NB311A_18531 [Nitrobacter sp. Nb-311A]
 gb|EAQ35489.1| hypothetical protein NB311A_18531 [Nitrobacter sp. Nb-311A]
          Length = 139

 Score =  205 bits (522), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 96/139 (69%), Positives = 116/139 (83%)

Query: 1   MSVQMVLLPVFIQIGLAFALLFAMATTRTRALTSGETKIGDIALREPNWPAQATKFGNCF 60
           MSVQMVLLPVF+ +GLAFALL  MA  RTR+L SGET+  DIALREPNW A+AT+  NCF
Sbjct: 1   MSVQMVLLPVFVLVGLAFALLMGMAVVRTRSLRSGETRFEDIALREPNWSARATQIANCF 60

Query: 61  ANQFELPILFYVLIAIALPLRRADLFIVLMSWVFVVTRFAHASVFVTSNDVRPRSLAWFA 120
           +NQ E+P+LFY+LIA+ALPLR ADL IV++SWVFV+TRF HA +FVTSN+V  R LAWFA
Sbjct: 61  SNQLEIPVLFYILIAVALPLRHADLVIVVLSWVFVITRFVHAGIFVTSNNVPQRGLAWFA 120

Query: 121 GALVLAAMWLYFALRLLLL 139
           G +VL  MW+YF LR+LL+
Sbjct: 121 GVVVLLVMWIYFMLRMLLV 139


>ref|NP_770624.1| hypothetical protein blr3984 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC49249.1| blr3984 [Bradyrhizobium japonicum USDA 110]
          Length = 213

 Score =  205 bits (521), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 101/140 (72%), Positives = 112/140 (80%)

Query: 1   MSVQMVLLPVFIQIGLAFALLFAMATTRTRALTSGETKIGDIALREPNWPAQATKFGNCF 60
           MSVQMVLLPVF+Q+GL FALL  M   R +AL SGETKI DIAL EPNWP   T+  NC+
Sbjct: 74  MSVQMVLLPVFVQVGLTFALLIGMVFGRRKALVSGETKIRDIALGEPNWPKSTTQIANCY 133

Query: 61  ANQFELPILFYVLIAIALPLRRADLFIVLMSWVFVVTRFAHASVFVTSNDVRPRSLAWFA 120
            NQFELP+LFY LIA+ALPLR  DLFIVLMSWVFVVTRFAHA VFV+SND+  RS  W A
Sbjct: 134 RNQFELPLLFYALIALALPLRHVDLFIVLMSWVFVVTRFAHAGVFVSSNDLGRRSTIWLA 193

Query: 121 GALVLAAMWLYFALRLLLLI 140
           G LVL  MW+YFALR+LLLI
Sbjct: 194 GVLVLLVMWIYFALRMLLLI 213


>ref|YP_577786.1| hypothetical protein Nham_2544 [Nitrobacter hamburgensis X14]
 gb|ABE63326.1| protein of unknown function DUF1123 [Nitrobacter hamburgensis X14]
          Length = 139

 Score =  203 bits (516), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 98/139 (70%), Positives = 115/139 (82%)

Query: 1   MSVQMVLLPVFIQIGLAFALLFAMATTRTRALTSGETKIGDIALREPNWPAQATKFGNCF 60
           MSVQ VLLPVF+ IGLAFALL  MA  RTR+L SGET+  DIALREPNW  +AT+  NCF
Sbjct: 1   MSVQAVLLPVFVLIGLAFALLMGMAVARTRSLRSGETRFEDIALREPNWSMRATQIANCF 60

Query: 61  ANQFELPILFYVLIAIALPLRRADLFIVLMSWVFVVTRFAHASVFVTSNDVRPRSLAWFA 120
           +NQFE+P+LFYVLIA+ALPLR ADL IVL+SWVFV+TRF HA +FVTSN+V  R + WFA
Sbjct: 61  SNQFEVPVLFYVLIALALPLRHADLVIVLLSWVFVITRFVHAGIFVTSNNVPRRGMVWFA 120

Query: 121 GALVLAAMWLYFALRLLLL 139
           G +VL AMW+YFALR LL+
Sbjct: 121 GVVVLLAMWIYFALRTLLV 139


>ref|YP_782178.1| hypothetical protein RPE_3264 [Rhodopseudomonas palustris BisA53]
 gb|ABJ07198.1| protein of unknown function DUF1123 [Rhodopseudomonas palustris
           BisA53]
          Length = 140

 Score =  200 bits (509), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 99/140 (70%), Positives = 117/140 (83%)

Query: 1   MSVQMVLLPVFIQIGLAFALLFAMATTRTRALTSGETKIGDIALREPNWPAQATKFGNCF 60
           MSVQMVL PVF+ +GLAFALL AM   R +AL S +TKI DI L +PNWP + T+  NC+
Sbjct: 1   MSVQMVLAPVFVLVGLAFALLLAMFWARRQALLSKQTKIRDIVLGQPNWPQRVTQISNCY 60

Query: 61  ANQFELPILFYVLIAIALPLRRADLFIVLMSWVFVVTRFAHASVFVTSNDVRPRSLAWFA 120
           ANQFELP+LFY LIA+ALPLR+ DL +VL+SWVFVVTRFAHA VFV+SND+  RS+AWFA
Sbjct: 61  ANQFELPLLFYALIALALPLRKVDLVLVLLSWVFVVTRFAHAGVFVSSNDLGRRSMAWFA 120

Query: 121 GALVLAAMWLYFALRLLLLI 140
           GALVL AMW+YFALR+LLLI
Sbjct: 121 GALVLLAMWVYFALRILLLI 140


>ref|YP_569403.1| hypothetical protein RPD_2267 [Rhodopseudomonas palustris BisB5]
 gb|ABE39502.1| protein of unknown function DUF1123 [Rhodopseudomonas palustris
           BisB5]
          Length = 140

 Score =  199 bits (505), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 98/140 (70%), Positives = 113/140 (80%)

Query: 1   MSVQMVLLPVFIQIGLAFALLFAMATTRTRALTSGETKIGDIALREPNWPAQATKFGNCF 60
           MSVQMVLLPVF+ IGL FAL+      RTRALTSG+TK+ DIAL +  WP + T+FGNC 
Sbjct: 1   MSVQMVLLPVFVLIGLTFALMLGTFAARTRALTSGQTKMRDIALGQQAWPDRVTQFGNCL 60

Query: 61  ANQFELPILFYVLIAIALPLRRADLFIVLMSWVFVVTRFAHASVFVTSNDVRPRSLAWFA 120
            NQFELP+LFY+LIA+ALPLR  DL +VL+SWVFVV RFAHA VFVTSND+R R   W A
Sbjct: 61  RNQFELPVLFYLLIALALPLRHVDLVMVLLSWVFVVARFAHAGVFVTSNDIRRRGPVWLA 120

Query: 121 GALVLAAMWLYFALRLLLLI 140
           GALVL AMW+YFALR+LLLI
Sbjct: 121 GALVLMAMWIYFALRILLLI 140