BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0050.0009.p         (55 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001239604.1| hypothetical protein BBta_3609 [Bradyrhizobi...    80   1e-13
ref|NP_947544.1| hypothetical protein RPA2199 [Rhodopseudomonas ...    73   2e-11
ref|YP_001205197.1| putative signal peptide [Bradyrhizobium sp. ...    68   4e-10
ref|YP_782182.1| hypothetical protein RPE_3269 [Rhodopseudomonas...    63   2e-08
ref|YP_532935.1| hypothetical protein RPC_3074 [Rhodopseudomonas...    60   1e-07

>ref|YP_001239604.1| hypothetical protein BBta_3609 [Bradyrhizobium sp. BTAi1]
 gb|ABQ35698.1| putative exported protein of unknown function [Bradyrhizobium sp.
          BTAi1]
          Length = 82

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 40/54 (74%), Positives = 48/54 (88%)

Query: 1  VIYVLAALLPPIGLLLNGQPFSAIFNLVLIVFCAVFGLFFHMLLLVPSAHAVIA 54
          +IY+LAAL+PP+GLL NGQPF+A+FNL L V C V GLFFH+LLLVPSAHA+IA
Sbjct: 1  MIYLLAALVPPLGLLFNGQPFAAVFNLALCVVCLVLGLFFHVLLLVPSAHALIA 54


>ref|NP_947544.1| hypothetical protein RPA2199 [Rhodopseudomonas palustris CGA009]
 emb|CAE27640.1| hypothetical protein RPA2199 [Rhodopseudomonas palustris CGA009]
          Length = 82

 Score = 72.8 bits (177), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 36/54 (66%), Positives = 44/54 (81%)

Query: 1  VIYVLAALLPPIGLLLNGQPFSAIFNLVLIVFCAVFGLFFHMLLLVPSAHAVIA 54
          +IY+LAA LPP+GLL NGQP SA+FNLVL+V C   GL FH LL++PS HA+IA
Sbjct: 1  MIYLLAAFLPPLGLLFNGQPLSAVFNLVLLVVCIALGLLFHPLLVIPSLHALIA 54


>ref|YP_001205197.1| putative signal peptide [Bradyrhizobium sp. ORS 278]
 emb|CAL76962.1| conserved hypothetical protein; putative signal peptide
          [Bradyrhizobium sp. ORS 278]
          Length = 82

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 41/54 (75%), Positives = 50/54 (92%)

Query: 1  VIYVLAALLPPIGLLLNGQPFSAIFNLVLIVFCAVFGLFFHMLLLVPSAHAVIA 54
          +IY+LAAL+PP+GLLLNGQPF+AIFNL+L + C V GLFFH+LLLVPSAHA+IA
Sbjct: 1  MIYLLAALVPPLGLLLNGQPFAAIFNLMLCLVCLVLGLFFHVLLLVPSAHALIA 54


>ref|YP_782182.1| hypothetical protein RPE_3269 [Rhodopseudomonas palustris BisA53]
 gb|ABJ07202.1| conserved hypothetical protein [Rhodopseudomonas palustris
          BisA53]
          Length = 82

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/42 (76%), Positives = 35/42 (83%)

Query: 13 GLLLNGQPFSAIFNLVLIVFCAVFGLFFHMLLLVPSAHAVIA 54
          GLLLNGQPF+A+FNLVL V C V GL FH LL VPSAHA+IA
Sbjct: 13 GLLLNGQPFAAVFNLVLCVICIVLGLVFHPLLFVPSAHALIA 54


>ref|YP_532935.1| hypothetical protein RPC_3074 [Rhodopseudomonas palustris BisB18]
 gb|ABD88616.1| conserved hypothetical protein [Rhodopseudomonas palustris
          BisB18]
          Length = 82

 Score = 60.1 bits (144), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/54 (70%), Positives = 46/54 (85%)

Query: 1  VIYVLAALLPPIGLLLNGQPFSAIFNLVLIVFCAVFGLFFHMLLLVPSAHAVIA 54
          +IY+LAA+LPP+GLL NGQP SA+FNL+L+V C V GL FH LL VPSAHA+IA
Sbjct: 1  MIYLLAAVLPPLGLLFNGQPISAVFNLLLLVVCIVLGLVFHPLLFVPSAHALIA 54