BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0050.0008.p (423 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_770611.1| MFS permease [Bradyrhizobium japonicum USDA 110... 432 e-119 ref|YP_782184.1| EmrB/QacA family drug resistance transporter [R... 431 e-119 ref|YP_577790.1| EmrB/QacA family drug resistance transporter [N... 431 e-118 ref|ZP_01046648.1| drug resistance transporter EmrB/QacA subfami... 429 e-118 ref|YP_569396.1| major facilitator transporter [Rhodopseudomonas... 429 e-118 >ref|NP_770611.1| MFS permease [Bradyrhizobium japonicum USDA 110] dbj|BAC49236.1| MFS permease [Bradyrhizobium japonicum USDA 110] Length = 496 Score = 432 bits (1112), Expect = e-119, Method: Compositional matrix adjust. Identities = 218/243 (89%), Positives = 233/243 (95%) Query: 1 MNKQRLIPLIVATALFMENMDSTVIATSLPAIAADIGTSPLTLKLAITSYLLSLAVFIPA 60 ++KQR+IPLIVATALFMENMDSTVIATSLPAIAADIGTSPLTLKLAITSYLLSLAVFIPA Sbjct: 2 VDKQRVIPLIVATALFMENMDSTVIATSLPAIAADIGTSPLTLKLAITSYLLSLAVFIPA 61 Query: 61 SGWTADRFGARIVFAGAVGVFMLGSIGCALSSSVTDFVFARILQGLGGAMMTPVGRLVLL 120 SGWTADRFGAR+VFA AVGVFM+GS+GCALS+SVTDFVFARILQG+GGAMMTPVGRLVLL Sbjct: 62 SGWTADRFGARMVFAIAVGVFMVGSVGCALSTSVTDFVFARILQGMGGAMMTPVGRLVLL 121 Query: 121 RSVDKSALVNAMAWVTVPALIGPVIGPPLGGFITTYFSWHWIFLINIPIGLLGIFLALKY 180 RSVDKSALVNAMAWVTVPALIGPVIGPPLGGFITTY SWHWIFLINIPIGLLGIF+AL++ Sbjct: 122 RSVDKSALVNAMAWVTVPALIGPVIGPPLGGFITTYASWHWIFLINIPIGLLGIFMALRF 181 Query: 181 IDPIKSEDPERFDLVGLVLAGIGLAGIAFGLSVAGLNLLPWPIVAALVGVGTVSMTLYVI 240 IDPIKSE+ E FDL G+VLAGIGLAGIAFGLSVAGLNLLPW VAAL+ G +SMTLYVI Sbjct: 182 IDPIKSEEREPFDLYGMVLAGIGLAGIAFGLSVAGLNLLPWSTVAALIAGGAISMTLYVI 241 Query: 241 HAR 243 HAR Sbjct: 242 HAR 244 >ref|YP_782184.1| EmrB/QacA family drug resistance transporter [Rhodopseudomonas palustris BisA53] gb|ABJ07204.1| drug resistance transporter, EmrB/QacA subfamily [Rhodopseudomonas palustris BisA53] Length = 491 Score = 431 bits (1109), Expect = e-119, Method: Compositional matrix adjust. Identities = 215/243 (88%), Positives = 231/243 (95%) Query: 1 MNKQRLIPLIVATALFMENMDSTVIATSLPAIAADIGTSPLTLKLAITSYLLSLAVFIPA 60 M +RLIPLIVA ALFMENMD+TVIATSLPAIAADIGTSPLTLKLAITSYLLSLAVFIPA Sbjct: 1 MKSERLIPLIVAAALFMENMDATVIATSLPAIAADIGTSPLTLKLAITSYLLSLAVFIPA 60 Query: 61 SGWTADRFGARIVFAGAVGVFMLGSIGCALSSSVTDFVFARILQGLGGAMMTPVGRLVLL 120 SGWTADRFGAR VF+ A+ VFM+GSIGCALS+S+TDFV ARILQGLGGAMMTPVGRLVLL Sbjct: 61 SGWTADRFGARTVFSVAIAVFMVGSIGCALSTSITDFVAARILQGLGGAMMTPVGRLVLL 120 Query: 121 RSVDKSALVNAMAWVTVPALIGPVIGPPLGGFITTYFSWHWIFLINIPIGLLGIFLALKY 180 RS+DKSALV AMAW+TVPALIGPVIGPPLGGFITTYFSWHWIFLINIPIG LGI LA +Y Sbjct: 121 RSIDKSALVGAMAWMTVPALIGPVIGPPLGGFITTYFSWHWIFLINIPIGALGIVLAQRY 180 Query: 181 IDPIKSEDPERFDLVGLVLAGIGLAGIAFGLSVAGLNLLPWPIVAALVGVGTVSMTLYVI 240 IDPIKS+DPERFDLVGL+LAGIGLAGIAFGLSVAGLNLLPWPIV AL+G+GT+SMTLYV+ Sbjct: 181 IDPIKSDDPERFDLVGLLLAGIGLAGIAFGLSVAGLNLLPWPIVTALIGIGTISMTLYVL 240 Query: 241 HAR 243 HAR Sbjct: 241 HAR 243 >ref|YP_577790.1| EmrB/QacA family drug resistance transporter [Nitrobacter hamburgensis X14] gb|ABE63330.1| Drug resistance transporter EmrB/QacA subfamily [Nitrobacter hamburgensis X14] Length = 490 Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust. Identities = 212/243 (87%), Positives = 230/243 (94%) Query: 1 MNKQRLIPLIVATALFMENMDSTVIATSLPAIAADIGTSPLTLKLAITSYLLSLAVFIPA 60 MNK+RLIPLIVA ALFMENMDSTVIATSLPAIA DIGTSPLTLKLAITSYLLSLA+FIPA Sbjct: 1 MNKERLIPLIVAAALFMENMDSTVIATSLPAIANDIGTSPLTLKLAITSYLLSLAIFIPA 60 Query: 61 SGWTADRFGARIVFAGAVGVFMLGSIGCALSSSVTDFVFARILQGLGGAMMTPVGRLVLL 120 SGWTADRFGAR VF+ A+ VFMLGSIGCALSSSVTDFV AR LQGLGGAMMTPVGRLVLL Sbjct: 61 SGWTADRFGARTVFSMAIAVFMLGSIGCALSSSVTDFVIARSLQGLGGAMMTPVGRLVLL 120 Query: 121 RSVDKSALVNAMAWVTVPALIGPVIGPPLGGFITTYFSWHWIFLINIPIGLLGIFLALKY 180 RS+DKSALVNAMAWVTVPA+IGPV+GPPLGGFITTYFSWHWIFLINIP+GLLGI LA ++ Sbjct: 121 RSIDKSALVNAMAWVTVPAMIGPVVGPPLGGFITTYFSWHWIFLINIPVGLLGIVLAQRF 180 Query: 181 IDPIKSEDPERFDLVGLVLAGIGLAGIAFGLSVAGLNLLPWPIVAALVGVGTVSMTLYVI 240 IDPI+SE+PERFDL G+VLAG+GL GIAFGLSVAGLNLLPW +V AL+GVG+VSMTLYV+ Sbjct: 181 IDPIRSENPERFDLYGMVLAGVGLGGIAFGLSVAGLNLLPWTVVIALIGVGSVSMTLYVV 240 Query: 241 HAR 243 HAR Sbjct: 241 HAR 243 >ref|ZP_01046648.1| drug resistance transporter EmrB/QacA subfamily protein [Nitrobacter sp. Nb-311A] gb|EAQ35484.1| drug resistance transporter EmrB/QacA subfamily protein [Nitrobacter sp. Nb-311A] Length = 490 Score = 429 bits (1102), Expect = e-118, Method: Compositional matrix adjust. Identities = 211/243 (86%), Positives = 230/243 (94%) Query: 1 MNKQRLIPLIVATALFMENMDSTVIATSLPAIAADIGTSPLTLKLAITSYLLSLAVFIPA 60 MNK+RLIPLIVA ALFMENMDSTVIATSLPAIAADIGTSPLTLKLAITSYLLSLAVFIPA Sbjct: 1 MNKERLIPLIVAAALFMENMDSTVIATSLPAIAADIGTSPLTLKLAITSYLLSLAVFIPA 60 Query: 61 SGWTADRFGARIVFAGAVGVFMLGSIGCALSSSVTDFVFARILQGLGGAMMTPVGRLVLL 120 SGWTADRFGAR VF+ A+ VFM+GSIGCALSSSVTDFV AR LQGLGGAMMTPVGRLVLL Sbjct: 61 SGWTADRFGARSVFSAAIVVFMIGSIGCALSSSVTDFVIARTLQGLGGAMMTPVGRLVLL 120 Query: 121 RSVDKSALVNAMAWVTVPALIGPVIGPPLGGFITTYFSWHWIFLINIPIGLLGIFLALKY 180 RS+DKSALVNAMAWVTVPALIGPVIGPPLGGFITTYFSWHWIFLINIP+GL+GIF+A ++ Sbjct: 121 RSIDKSALVNAMAWVTVPALIGPVIGPPLGGFITTYFSWHWIFLINIPVGLIGIFMAQRF 180 Query: 181 IDPIKSEDPERFDLVGLVLAGIGLAGIAFGLSVAGLNLLPWPIVAALVGVGTVSMTLYVI 240 IDPI+S+DPERFDL G+VLAGIG+ GIAFGLSVAGLNLLPW +V AL+GVG+VSM Y++ Sbjct: 181 IDPIRSDDPERFDLYGMVLAGIGVGGIAFGLSVAGLNLLPWTVVTALIGVGSVSMAAYMM 240 Query: 241 HAR 243 HAR Sbjct: 241 HAR 243 >ref|YP_569396.1| major facilitator transporter [Rhodopseudomonas palustris BisB5] gb|ABE39495.1| major facilitator superfamily MFS_1 [Rhodopseudomonas palustris BisB5] Length = 504 Score = 429 bits (1102), Expect = e-118, Method: Compositional matrix adjust. Identities = 212/243 (87%), Positives = 230/243 (94%) Query: 1 MNKQRLIPLIVATALFMENMDSTVIATSLPAIAADIGTSPLTLKLAITSYLLSLAVFIPA 60 MNK+RLIPLIVA ALFMENMD+TVIATSLPAIAADIGTSPLTLKLAITSYLLSLAVFIPA Sbjct: 14 MNKERLIPLIVAAALFMENMDATVIATSLPAIAADIGTSPLTLKLAITSYLLSLAVFIPA 73 Query: 61 SGWTADRFGARIVFAGAVGVFMLGSIGCALSSSVTDFVFARILQGLGGAMMTPVGRLVLL 120 SGWTADRFGAR VF+ A+ VFM+GSIGCALSSS+TDFV ARILQGLGGAMMTPVGRLVLL Sbjct: 74 SGWTADRFGARTVFSAAIAVFMVGSIGCALSSSITDFVAARILQGLGGAMMTPVGRLVLL 133 Query: 121 RSVDKSALVNAMAWVTVPALIGPVIGPPLGGFITTYFSWHWIFLINIPIGLLGIFLALKY 180 RS+DKSALV+AMAW+T+PALIGPVIGPPLGGFITTYFSWHWIFLINIPIGL+GIF A +Y Sbjct: 134 RSIDKSALVSAMAWMTLPALIGPVIGPPLGGFITTYFSWHWIFLINIPIGLVGIFFAQRY 193 Query: 181 IDPIKSEDPERFDLVGLVLAGIGLAGIAFGLSVAGLNLLPWPIVAALVGVGTVSMTLYVI 240 IDPI+SE+PERFDL GLVLAGIGLAGIAFGLSVAGL LLPWPIV L+ VG +SMTLY++ Sbjct: 194 IDPIRSENPERFDLYGLVLAGIGLAGIAFGLSVAGLGLLPWPIVTGLIAVGAISMTLYLL 253 Query: 241 HAR 243 HAR Sbjct: 254 HAR 256