BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0049.0010.p         (101 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_774939.1| hypothetical protein blr8299 [Bradyrhizobium ja...   204   5e-51
gb|AAG60913.1|AF322013_32 ID496 [Bradyrhizobium japonicum]            203   7e-51
ref|NP_768574.1| hypothetical protein blr1934 [Bradyrhizobium ja...   203   7e-51
ref|YP_002277132.1| putative methylase/helicase [Gluconacetobact...   198   2e-49
ref|ZP_07026244.1| putative methylase/helicase [Afipia sp. 1NLS2...   195   2e-48

>ref|NP_774939.1| hypothetical protein blr8299 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC53564.1| blr8299 [Bradyrhizobium japonicum USDA 110]
          Length = 744

 Score =  204 bits (518), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 99/101 (98%), Positives = 100/101 (99%)

Query: 1   MQAANITGETGTLNRQAKSAARSAFESAKQRFFGHLLTSMKTPTLVRSIERDLAEGHAAV 60
           M+AANITGE GTLNRQAKSAARSAFESAKQRFFGHLLTSMKTPTLVRSIERDLAEGHAAV
Sbjct: 59  MEAANITGENGTLNRQAKSAARSAFESAKQRFFGHLLTSMKTPTLVRSIERDLAEGHAAV 118

Query: 61  IQIVSTGEALMERRLAEIPPEEWNDVRVDITPREYVLDYLA 101
           IQIVSTGEALMERRLAEIPPEEWNDVRVDITPREYVLDYLA
Sbjct: 119 IQIVSTGEALMERRLAEIPPEEWNDVRVDITPREYVLDYLA 159


>gb|AAG60913.1|AF322013_32 ID496 [Bradyrhizobium japonicum]
          Length = 842

 Score =  203 bits (517), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 99/101 (98%), Positives = 100/101 (99%)

Query: 1   MQAANITGETGTLNRQAKSAARSAFESAKQRFFGHLLTSMKTPTLVRSIERDLAEGHAAV 60
           MQAANITGETGTLNRQAKSAARSAFESAKQRFFGHLLTSMKTPTLVRSIERDLAEGHAAV
Sbjct: 157 MQAANITGETGTLNRQAKSAARSAFESAKQRFFGHLLTSMKTPTLVRSIERDLAEGHAAV 216

Query: 61  IQIVSTGEALMERRLAEIPPEEWNDVRVDITPREYVLDYLA 101
           IQIVSTGEALMERRLAEIPP EWNDVRVDITPREY+LDYLA
Sbjct: 217 IQIVSTGEALMERRLAEIPPAEWNDVRVDITPREYLLDYLA 257


>ref|NP_768574.1| hypothetical protein blr1934 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC47199.1| blr1934 [Bradyrhizobium japonicum USDA 110]
          Length = 744

 Score =  203 bits (516), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 99/101 (98%), Positives = 100/101 (99%)

Query: 1   MQAANITGETGTLNRQAKSAARSAFESAKQRFFGHLLTSMKTPTLVRSIERDLAEGHAAV 60
           MQAANITGETGTLNRQAKSAARSAFESAKQRFFGHLLTSMKTPTLVRSIERDLAEGHAAV
Sbjct: 59  MQAANITGETGTLNRQAKSAARSAFESAKQRFFGHLLTSMKTPTLVRSIERDLAEGHAAV 118

Query: 61  IQIVSTGEALMERRLAEIPPEEWNDVRVDITPREYVLDYLA 101
           IQIVSTGEALMERRLAEIPP EWNDVRVDITPREY+LDYLA
Sbjct: 119 IQIVSTGEALMERRLAEIPPAEWNDVRVDITPREYLLDYLA 159


>ref|YP_002277132.1| putative methylase/helicase [Gluconacetobacter diazotrophicus PAl
           5]
 gb|ACI52517.1| putative methylase/helicase [Gluconacetobacter diazotrophicus PAl
           5]
          Length = 1440

 Score =  198 bits (503), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 97/101 (96%), Positives = 99/101 (98%)

Query: 1   MQAANITGETGTLNRQAKSAARSAFESAKQRFFGHLLTSMKTPTLVRSIERDLAEGHAAV 60
           M+AANITG TGTLNRQAKSAARSAFESAKQRFFGHLLTSMKTPTLVRSIERDLA+GHAAV
Sbjct: 755 MEAANITGATGTLNRQAKSAARSAFESAKQRFFGHLLTSMKTPTLVRSIERDLADGHAAV 814

Query: 61  IQIVSTGEALMERRLAEIPPEEWNDVRVDITPREYVLDYLA 101
           IQIVSTGEALMERRLAEIP EEWNDVRVDITPREYVLDYLA
Sbjct: 815 IQIVSTGEALMERRLAEIPTEEWNDVRVDITPREYVLDYLA 855


>ref|ZP_07026244.1| putative methylase/helicase [Afipia sp. 1NLS2]
 gb|EFI53386.1| putative methylase/helicase [Afipia sp. 1NLS2]
          Length = 1444

 Score =  195 bits (496), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 93/101 (92%), Positives = 99/101 (98%)

Query: 1   MQAANITGETGTLNRQAKSAARSAFESAKQRFFGHLLTSMKTPTLVRSIERDLAEGHAAV 60
           MQAAN+TGETGTLNRQAKSAARSAFESAKQRFFGHLLTSMKTPTL+R I++DLA+GHAAV
Sbjct: 759 MQAANVTGETGTLNRQAKSAARSAFESAKQRFFGHLLTSMKTPTLIRRIDQDLADGHAAV 818

Query: 61  IQIVSTGEALMERRLAEIPPEEWNDVRVDITPREYVLDYLA 101
           IQIVSTGEALMERRLAEIP EEWND+RVDITPREYVLDYLA
Sbjct: 819 IQIVSTGEALMERRLAEIPTEEWNDIRVDITPREYVLDYLA 859