BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0049.0006.p         (196 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_774938.1| hypothetical protein blr8298 [Bradyrhizobium ja...   338   3e-91
ref|NP_768573.1| hypothetical protein blr1933 [Bradyrhizobium ja...   332   1e-89
ref|YP_001925755.1| probably methylase/helicase [Methylobacteriu...   319   1e-85
ref|ZP_07025685.1| methylase/helicase [Afipia sp. 1NLS2] >gi|298...   317   7e-85
ref|YP_004302041.1| Probably methylase/helicase [Polymorphum gil...   315   2e-84

>ref|NP_774938.1| hypothetical protein blr8298 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC53563.1| blr8298 [Bradyrhizobium japonicum USDA 110]
          Length = 723

 Score =  338 bits (867), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 180/194 (92%), Positives = 187/194 (96%)

Query: 1   MEVASGASDATGAWDWKMAYDACEVTTVLFLRKYGKALFRKANSTASRLSALDKIAGLLP 60
           MEVASGASDATGAWDWKMAYD CEV TVLFLRKYGKALFRKA+S ASRLSAL+KIA LLP
Sbjct: 53  MEVASGASDATGAWDWKMAYDTCEVATVLFLRKYGKALFRKADSAASRLSALEKIARLLP 112

Query: 61  THTRRSAESETFQQYSTPIPLGLAALTAAAITAADRVLEPSAGTGLLAILADIAGSGLVL 120
           THTRRSAESE FQQ+STPIPLGLAALTAAAITAADRVLEPSAGTGLLAILA+IAGSGLVL
Sbjct: 113 THTRRSAESEIFQQFSTPIPLGLAALTAAAITAADRVLEPSAGTGLLAILAEIAGSGLVL 172

Query: 121 NELAESRATLLSSLFPAISVTRFDAAQIDDHLDPTVVPSVVLMNPPFSAMANVSGRMADT 180
           NELA++RA LLSSLFPA+SVTRFDAAQIDDHLDPTVVPS VLMNPPFSAMANVSGRMADT
Sbjct: 173 NELAKTRAVLLSSLFPAVSVTRFDAAQIDDHLDPTVVPSFVLMNPPFSAMANVSGRMADT 232

Query: 181 AYRHIASALARLAD 194
           AYRHIASALARLAD
Sbjct: 233 AYRHIASALARLAD 246


>ref|NP_768573.1| hypothetical protein blr1933 [Bradyrhizobium japonicum USDA 110]
 gb|AAG60912.1|AF322013_31 ID495 [Bradyrhizobium japonicum]
 dbj|BAC47198.1| blr1933 [Bradyrhizobium japonicum USDA 110]
          Length = 683

 Score =  332 bits (852), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 176/194 (90%), Positives = 181/194 (93%)

Query: 1   MEVASGASDATGAWDWKMAYDACEVTTVLFLRKYGKALFRKANSTASRLSALDKIAGLLP 60
           ME ASGASDATGAWDWKM YDACEV TVLFLRKYGKALFRKA S ASRLSALDKIAGLLP
Sbjct: 53  MEAASGASDATGAWDWKMTYDACEVATVLFLRKYGKALFRKAASPASRLSALDKIAGLLP 112

Query: 61  THTRRSAESETFQQYSTPIPLGLAALTAAAITAADRVLEPSAGTGLLAILADIAGSGLVL 120
           THTRRS ESETFQQ+STP+ LGL ALTAAA+TAADRVLEPSAGTGLLAILA+IAG GLVL
Sbjct: 113 THTRRSVESETFQQFSTPLQLGLTALTAAAMTAADRVLEPSAGTGLLAILAEIAGGGLVL 172

Query: 121 NELAESRATLLSSLFPAISVTRFDAAQIDDHLDPTVVPSVVLMNPPFSAMANVSGRMADT 180
           NELAE+RA LLSSLFPAISVTRFDAAQIDDHLDP VVP VVLMNPPFSAMANVSGRM DT
Sbjct: 173 NELAETRAALLSSLFPAISVTRFDAAQIDDHLDPPVVPGVVLMNPPFSAMANVSGRMPDT 232

Query: 181 AYRHIASALARLAD 194
           AYRHIASALARLAD
Sbjct: 233 AYRHIASALARLAD 246


>ref|YP_001925755.1| probably methylase/helicase [Methylobacterium populi BJ001]
 gb|ACB81220.1| probably methylase/helicase [Methylobacterium populi BJ001]
          Length = 1448

 Score =  319 bits (818), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 159/193 (82%), Positives = 169/193 (87%)

Query: 1   MEVASGASDATGAWDWKMAYDACEVTTVLFLRKYGKALFRKANSTASRLSALDKIAGLLP 60
           ME A GASDATGAWDWK AYDACE  TVLFLRKYG+ALFRKA S A+RLSAL KIA LLP
Sbjct: 54  METAFGASDATGAWDWKTAYDACEAATVLFLRKYGRALFRKAGSPAARLSALSKIANLLP 113

Query: 61  THTRRSAESETFQQYSTPIPLGLAALTAAAITAADRVLEPSAGTGLLAILADIAGSGLVL 120
           THTRRS ES+TFQQ+STPIPLGL A  AAAIT  DRVLEPSAGTGLLAILA+ AG  LVL
Sbjct: 114 THTRRSTESQTFQQFSTPIPLGLVAAHAAAITPVDRVLEPSAGTGLLAILAETAGGALVL 173

Query: 121 NELAESRATLLSSLFPAISVTRFDAAQIDDHLDPTVVPSVVLMNPPFSAMANVSGRMADT 180
           NELA++RA+LLS LFPAI VTRFDAAQIDDHLDP V PSVVLMNPPFSAMANV GR+ADT
Sbjct: 174 NELADTRASLLSLLFPAIPVTRFDAAQIDDHLDPVVTPSVVLMNPPFSAMANVEGRIADT 233

Query: 181 AYRHIASALARLA 193
            YRH+ASALARLA
Sbjct: 234 TYRHVASALARLA 246


>ref|ZP_07025685.1| methylase/helicase [Afipia sp. 1NLS2]
 gb|EFI52827.1| methylase/helicase [Afipia sp. 1NLS2]
          Length = 1450

 Score =  317 bits (811), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 155/193 (80%), Positives = 170/193 (88%)

Query: 1   MEVASGASDATGAWDWKMAYDACEVTTVLFLRKYGKALFRKANSTASRLSALDKIAGLLP 60
           ME A GASD+ GAWDWK AYDACE  TVLFLRKYGK LFRK  +  + L    KIAGL+P
Sbjct: 54  MEAAFGASDSAGAWDWKTAYDACEAATVLFLRKYGKPLFRKVGNPTAILPQFVKIAGLMP 113

Query: 61  THTRRSAESETFQQYSTPIPLGLAALTAAAITAADRVLEPSAGTGLLAILADIAGSGLVL 120
           THTRRS E++TFQQ+STPIPLGLAA+TAAAIT ADRVLEPSAGTGLLAILA+IAGS LVL
Sbjct: 114 THTRRSQEAQTFQQFSTPIPLGLAAMTAAAITPADRVLEPSAGTGLLAILAEIAGSSLVL 173

Query: 121 NELAESRATLLSSLFPAISVTRFDAAQIDDHLDPTVVPSVVLMNPPFSAMANVSGRMADT 180
           NELAE+RA+LLSSLFPA+SVTRFDAAQIDDHLDP VVP+VVLMNPPFS MANV GRMAD 
Sbjct: 174 NELAETRASLLSSLFPALSVTRFDAAQIDDHLDPAVVPTVVLMNPPFSVMANVEGRMADA 233

Query: 181 AYRHIASALARLA 193
           A+RH+ASALARLA
Sbjct: 234 AFRHVASALARLA 246


>ref|YP_004302041.1| Probably methylase/helicase [Polymorphum gilvum SL003B-26A1]
 gb|ADZ68745.1| Probably methylase/helicase [Polymorphum gilvum SL003B-26A1]
          Length = 1496

 Score =  315 bits (808), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 155/193 (80%), Positives = 170/193 (88%)

Query: 1   MEVASGASDATGAWDWKMAYDACEVTTVLFLRKYGKALFRKANSTASRLSALDKIAGLLP 60
           ME A GASDA GAWDWK AYDACE  +VLFLRKYGKALFRKA S + RL  L KIAGLLP
Sbjct: 102 MESAFGASDAIGAWDWKTAYDACEAASVLFLRKYGKALFRKAGSPSERLPQLGKIAGLLP 161

Query: 61  THTRRSAESETFQQYSTPIPLGLAALTAAAITAADRVLEPSAGTGLLAILADIAGSGLVL 120
           THTRRS E++ FQQ+STPIPLGLAA+TAAAIT+ADRVLEPSAGTGLLAILA+IAG  LVL
Sbjct: 162 THTRRSEEAQAFQQFSTPIPLGLAAVTAAAITSADRVLEPSAGTGLLAILAEIAGGTLVL 221

Query: 121 NELAESRATLLSSLFPAISVTRFDAAQIDDHLDPTVVPSVVLMNPPFSAMANVSGRMADT 180
           NELA++RA LLS LFPA+SVTRFDAAQIDDHLDP  +P+VVLMNPPFS MANV GRMAD 
Sbjct: 222 NELADTRAGLLSLLFPALSVTRFDAAQIDDHLDPAAIPTVVLMNPPFSVMANVEGRMADA 281

Query: 181 AYRHIASALARLA 193
           A+RH+ASALARLA
Sbjct: 282 AFRHVASALARLA 294