BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0049.0004.p (269 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_774936.1| hypothetical protein blr8296 [Bradyrhizobium ja... 545 e-153 ref|NP_768572.1| hypothetical protein blr1932 [Bradyrhizobium ja... 480 e-133 ref|YP_002277129.1| ParB domain-containing protein nuclease [Glu... 459 e-127 ref|ZP_07026247.1| ParB domain protein nuclease [Afipia sp. 1NLS... 429 e-118 ref|NP_109544.1| putative plasmid stabilization protein [Mesorhi... 335 6e-90 >ref|NP_774936.1| hypothetical protein blr8296 [Bradyrhizobium japonicum USDA 110] dbj|BAC53561.1| blr8296 [Bradyrhizobium japonicum USDA 110] Length = 578 Score = 545 bits (1403), Expect = e-153, Method: Compositional matrix adjust. Identities = 269/269 (100%), Positives = 269/269 (100%) Query: 1 VKPLPDRLLTELTAERTLALRDRLAITPSVAFQAVLHKFCLDVFSRYSSYGTAMEVSVRS 60 VKPLPDRLLTELTAERTLALRDRLAITPSVAFQAVLHKFCLDVFSRYSSYGTAMEVSVRS Sbjct: 310 VKPLPDRLLTELTAERTLALRDRLAITPSVAFQAVLHKFCLDVFSRYSSYGTAMEVSVRS 369 Query: 61 VSFPVQAQGLKDTPAAKAIDARHKTWEERLPKEKTELWDWLTGLTGDEQAALFAHCASFG 120 VSFPVQAQGLKDTPAAKAIDARHKTWEERLPKEKTELWDWLTGLTGDEQAALFAHCASFG Sbjct: 370 VSFPVQAQGLKDTPAAKAIDARHKTWEERLPKEKTELWDWLTGLTGDEQAALFAHCASFG 429 Query: 121 INALYEKGDRYGGGITPHTVEHRITEADRIARAVDLDMVESGWRPTVENYLGRVPKLRIL 180 INALYEKGDRYGGGITPHTVEHRITEADRIARAVDLDMVESGWRPTVENYLGRVPKLRIL Sbjct: 430 INALYEKGDRYGGGITPHTVEHRITEADRIARAVDLDMVESGWRPTVENYLGRVPKLRIL 489 Query: 181 EAVREGAGERAAQLIDHLKKGDMAKEAERLLAEAGWLPEPLRMPDAQLAAAVDAAEPEGD 240 EAVREGAGERAAQLIDHLKKGDMAKEAERLLAEAGWLPEPLRMPDAQLAAAVDAAEPEGD Sbjct: 490 EAVREGAGERAAQLIDHLKKGDMAKEAERLLAEAGWLPEPLRMPDAQLAAAVDAAEPEGD 549 Query: 241 GEALPEFLAGDDEETPADEADESRMIAAE 269 GEALPEFLAGDDEETPADEADESRMIAAE Sbjct: 550 GEALPEFLAGDDEETPADEADESRMIAAE 578 >ref|NP_768572.1| hypothetical protein blr1932 [Bradyrhizobium japonicum USDA 110] gb|AAG60910.1|AF322013_29 ID489 [Bradyrhizobium japonicum] dbj|BAC47197.1| blr1932 [Bradyrhizobium japonicum USDA 110] Length = 726 Score = 480 bits (1235), Expect = e-133, Method: Compositional matrix adjust. Identities = 246/269 (91%), Positives = 256/269 (95%), Gaps = 6/269 (2%) Query: 1 VKPLPDRLLTELTAERTLALRDRLAITPSVAFQAVLHKFCLDVFSRYSSYGTAMEVSVRS 60 VKPLPDRLLTELTAERTLALRD+LAITPSVAFQ+VLHKFCLDVF RYSSYGTAMEVSVR+ Sbjct: 464 VKPLPDRLLTELTAERTLALRDKLAITPSVAFQSVLHKFCLDVFIRYSSYGTAMEVSVRN 523 Query: 61 VSFPVQAQGLKDTPAAKAIDARHKTWEERLPKEKTELWDWLTGLTGDEQAALFAHCASFG 120 SFPVQA GLKD+ AAKAIDARHKTW+ERLP++K LWDWL+GLT DEQAALFAHCASFG Sbjct: 524 ASFPVQAPGLKDSSAAKAIDARHKTWDERLPRDKANLWDWLSGLTADEQAALFAHCASFG 583 Query: 121 INALYEKGDRYGGGITPHTVEHRITEADRIARAVDLDMVESGWRPTVENYLGRVPKLRIL 180 +NALYEKGDRYGGGITPHTVEHRITEADRIARAVDLDMVESGWRPTVENYLGRVPKLRIL Sbjct: 584 VNALYEKGDRYGGGITPHTVEHRITEADRIARAVDLDMVESGWRPTVENYLGRVPKLRIL 643 Query: 181 EAVREGAGERAAQLIDHLKKGDMAKEAERLLAEAGWLPEPLRMPDAQLAAAVDAAEPEGD 240 EAVREGAGE+AAQLIDHLKKGDMAKEAERLLAEAGWLPEPLRMPDAQLAAAVDAAEPEGD Sbjct: 644 EAVREGAGEQAAQLIDHLKKGDMAKEAERLLAEAGWLPEPLRMPDAQLAAAVDAAEPEGD 703 Query: 241 GEALPEFLAGDDEETPADEADESRMIAAE 269 GEALPEFLAGD DEADESRMIAAE Sbjct: 704 GEALPEFLAGD------DEADESRMIAAE 726 >ref|YP_002277129.1| ParB domain-containing protein nuclease [Gluconacetobacter diazotrophicus PAl 5] gb|ACI52514.1| ParB domain protein nuclease [Gluconacetobacter diazotrophicus PAl 5] Length = 714 Score = 459 bits (1180), Expect = e-127, Method: Compositional matrix adjust. Identities = 222/269 (82%), Positives = 242/269 (89%) Query: 1 VKPLPDRLLTELTAERTLALRDRLAITPSVAFQAVLHKFCLDVFSRYSSYGTAMEVSVRS 60 +KPLPDRL+TELTAERTLAL+D+LA PSVAFQAVLHKFCLDVFSRY +YGTAMEVSVRS Sbjct: 446 LKPLPDRLVTELTAERTLALQDKLANMPSVAFQAVLHKFCLDVFSRYFAYGTAMEVSVRS 505 Query: 61 VSFPVQAQGLKDTPAAKAIDARHKTWEERLPKEKTELWDWLTGLTGDEQAALFAHCASFG 120 SFP QAQGL DTPAAKAIDAR K WEER+PK+K +LWDWLTGLTGDEQAALFAHCASFG Sbjct: 506 TSFPAQAQGLNDTPAAKAIDARRKAWEERMPKDKADLWDWLTGLTGDEQAALFAHCASFG 565 Query: 121 INALYEKGDRYGGGITPHTVEHRITEADRIARAVDLDMVESGWRPTVENYLGRVPKLRIL 180 +NALYEKGDRYGGG +PHTVE RI +ADRIARAVDLDMV++GWRPTV+NYLGRVPK RIL Sbjct: 566 VNALYEKGDRYGGGTSPHTVEQRIADADRIARAVDLDMVQAGWRPTVDNYLGRVPKRRIL 625 Query: 181 EAVREGAGERAAQLIDHLKKGDMAKEAERLLAEAGWLPEPLRMPDAQLAAAVDAAEPEGD 240 EAVREGAG+RAAQLIDHLKKGDMAKEAERLLAE GWLPEPLRM D Q AA +AA+ + D Sbjct: 626 EAVREGAGDRAAQLIDHLKKGDMAKEAERLLAETGWLPEPLRMADEQEVAAGEAAQTDAD 685 Query: 241 GEALPEFLAGDDEETPADEADESRMIAAE 269 GE LPEFL DDEE+ ADEADE M+AAE Sbjct: 686 GEELPEFLTEDDEESVADEADEPHMVAAE 714 >ref|ZP_07026247.1| ParB domain protein nuclease [Afipia sp. 1NLS2] gb|EFI53389.1| ParB domain protein nuclease [Afipia sp. 1NLS2] Length = 708 Score = 429 bits (1103), Expect = e-118, Method: Compositional matrix adjust. Identities = 215/269 (79%), Positives = 235/269 (87%), Gaps = 6/269 (2%) Query: 1 VKPLPDRLLTELTAERTLALRDRLAITPSVAFQAVLHKFCLDVFSRYSSYGTAMEVSVRS 60 +KPLPDRL+TELTAERTLALRD+LA TP+VAFQAVLHKFCLDVFSRY SYGTAMEVSVRS Sbjct: 446 LKPLPDRLVTELTAERTLALRDKLASTPAVAFQAVLHKFCLDVFSRYFSYGTAMEVSVRS 505 Query: 61 VSFPVQAQGLKDTPAAKAIDARHKTWEERLPKEKTELWDWLTGLTGDEQAALFAHCASFG 120 SFPVQA GLKDTPAAKAID RHK WEER+PK+K +LWDWLT LTGDEQA LFAHCASFG Sbjct: 506 ASFPVQAPGLKDTPAAKAIDVRHKAWEERMPKDKADLWDWLTTLTGDEQATLFAHCASFG 565 Query: 121 INALYEKGDRYGGGITPHTVEHRITEADRIARAVDLDMVESGWRPTVENYLGRVPKLRIL 180 INALYEKGDRYG G++ HTVE RI EADR+A+AVDLDMV++GWRPTVENYLGRVPK RIL Sbjct: 566 INALYEKGDRYGAGVSSHTVEQRIAEADRLAQAVDLDMVQAGWRPTVENYLGRVPKRRIL 625 Query: 181 EAVREGAGERAAQLIDHLKKGDMAKEAERLLAEAGWLPEPLRMPDAQLAAAVDAAEPEGD 240 EAV+EGAGERAAQLIDHLKK DMAKEAERLLA+ GWLPEPLR+ A A V+A E Sbjct: 626 EAVQEGAGERAAQLIDHLKKDDMAKEAERLLADTGWLPEPLRIAAAD-DAPVEATAAEDG 684 Query: 241 GEALPEFLAGDDEETPADEADESRMIAAE 269 GEALPEFLAGDDE EA+ ++IAAE Sbjct: 685 GEALPEFLAGDDE-----EAEAPQVIAAE 708 >ref|NP_109544.1| putative plasmid stabilization protein [Mesorhizobium loti MAFF303099] dbj|BAB54883.1| putative plasmid stabilization protein [Mesorhizobium loti MAFF303099] Length = 747 Score = 335 bits (858), Expect = 6e-90, Method: Compositional matrix adjust. Identities = 170/270 (62%), Positives = 204/270 (75%), Gaps = 7/270 (2%) Query: 1 VKPLPDRLLTELTAERTLALRDRLAITPSVAFQAVLHKFCLDVFSRYSSYGTAMEVSVRS 60 +KPLPDRL+TELTA+RTLALRD+LA P+ AF AVLHKF D FS YS+ G AMEV VR Sbjct: 484 IKPLPDRLITELTADRTLALRDKLANDPATAFLAVLHKFVRDAFSGYSAQGVAMEVFVRG 543 Query: 61 VSFPVQAQGLKDTPAAKAIDARHKTWEERLPKEKTELWDWLTGLTGDEQAALFAHCASFG 120 FPVQ++GL+DT A++I RH+ WE+RLP + +LWD L+ LTG EQ LFAHCAS G Sbjct: 544 TVFPVQSEGLRDTNYARSIKNRHEAWEKRLPTDVADLWDSLSALTGTEQTELFAHCASLG 603 Query: 121 INALYEKGDRYGGG-ITPHTVEHRITEADRIARAVDLDMVESGWRPTVENYLGRVPKLRI 179 +NALYE+ DRYG G I+ H V+ R+ +AD +ARAV LDM+ +GWRPTV NYLG V K RI Sbjct: 604 VNALYERADRYGNGAISTHGVQQRLADADHLARAVGLDMIAAGWRPTVGNYLGSVTKARI 663 Query: 180 LEAVREGAGERAAQLIDHLKKGDMAKEAERLLAEAGWLPEPLRMPDAQLAAAVDAAEPEG 239 L+AVREGAGERA+QLIDHLKKGDMAKEAERLLA++GWLPEPLR+ D + A A E Sbjct: 664 LQAVREGAGERASQLIDHLKKGDMAKEAERLLADSGWLPEPLRLADVDIEAVGSNAGDE- 722 Query: 240 DGEALPEFLAGDDEETPADEADESRMIAAE 269 E LPEFLAG D A + D ++ AAE Sbjct: 723 -DETLPEFLAGGD----AGDEDVKQLDAAE 747