BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0049.0003.p (469 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_768572.1| hypothetical protein blr1932 [Bradyrhizobium ja... 761 0.0 ref|YP_002277129.1| ParB domain-containing protein nuclease [Glu... 739 0.0 ref|ZP_07026247.1| ParB domain protein nuclease [Afipia sp. 1NLS... 732 0.0 ref|YP_673106.1| ParB family protein [Mesorhizobium sp. BNC1] >g... 652 0.0 ref|ZP_07025855.1| ParB domain protein nuclease [Afipia sp. 1NLS... 640 0.0 >ref|NP_768572.1| hypothetical protein blr1932 [Bradyrhizobium japonicum USDA 110] gb|AAG60910.1|AF322013_29 ID489 [Bradyrhizobium japonicum] dbj|BAC47197.1| blr1932 [Bradyrhizobium japonicum USDA 110] Length = 726 Score = 761 bits (1966), Expect = 0.0, Method: Compositional matrix adjust. Identities = 384/434 (88%), Positives = 400/434 (92%), Gaps = 1/434 (0%) Query: 1 MATAVRKITLSSSRDIPFNKLVLSQSNVRREKAGVSIEELAEDIARRTLLQSLNVRPVLD 60 MATAV+KITLSSSRDIPFNKLVLSQSNVRR KAGVSIEELAEDIARRTLLQSLNVRPVLD Sbjct: 20 MATAVQKITLSSSRDIPFNKLVLSQSNVRRVKAGVSIEELAEDIARRTLLQSLNVRPVLD 79 Query: 61 AEGAETGMFEIPAGGRRYRALQLLVKQKRLAKTASVPCVVRDPATDVLAEDDSLAENIQR 120 AEG ETGMFEIPAGGRRYRALQLLVKQKRLAKTA VPCVVRDPAT +L EDDSLAEN+QR Sbjct: 80 AEG-ETGMFEIPAGGRRYRALQLLVKQKRLAKTAPVPCVVRDPATGILGEDDSLAENVQR 138 Query: 121 APLHPLDQFRAFHALREKGQSEEDIAAAFFTSVNVVKQRLRLASVSPALLNVYAEDGMSL 180 PLHPLDQFRAF REKG++EEDIAAAFFTSVNVVKQRLRLASVSPALL+VYA+DGMSL Sbjct: 139 EPLHPLDQFRAFLTQREKGRTEEDIAAAFFTSVNVVKQRLRLASVSPALLDVYADDGMSL 198 Query: 181 EQLMAFTVTADHGRQEQVWQAISGSWHKEPYQIRRMLTEKTVRASDRRAVFVGLDTYEAA 240 EQLMAFTVTADHGRQEQVWQAIS SW KEPYQIRRMLTEKTVRASDRRAVFVGLD YEAA Sbjct: 199 EQLMAFTVTADHGRQEQVWQAISSSWQKEPYQIRRMLTEKTVRASDRRAVFVGLDAYEAA 258 Query: 241 GGMVLRDLFQSDDGGWLEDVALLDRLVTEKLKAEAETIAAEGWKWIEVAIDFPYGHTRGL 300 GG+VLRDLFQSDDGGWLED+ALLDRLV EKLKAEAETIAAEGWKWIEVAIDFPYGH RGL Sbjct: 259 GGVVLRDLFQSDDGGWLEDIALLDRLVAEKLKAEAETIAAEGWKWIEVAIDFPYGHARGL 318 Query: 301 RELDGVSTGLTPEEQTTIEALKAEFARLEAEHDGADELPDEVDQRLGEIETALAVFDDRP 360 RELDGV LT EEQ IEAL+AE+ RL+AEHDGADELPDEVDQRLGEIETAL F+DRP Sbjct: 319 RELDGVLADLTTEEQAAIEALEAEYVRLQAEHDGADELPDEVDQRLGEIETALGAFNDRP 378 Query: 361 INYQLADIARAGVFVGIDAEGTLLVDRGYVRPEDELPVAEPEQNSDGEPAAAALDGAEPL 420 + YQ ADIARAGVFVGIDAEG LLVDRGYVRPEDE+PV EPEQ EP AAALDGAEP Sbjct: 379 VIYQPADIARAGVFVGIDAEGKLLVDRGYVRPEDEVPVTEPEQGRGSEPDAAALDGAEPS 438 Query: 421 APAIQRAVIIVGGQ 434 APAIQRAVI +GGQ Sbjct: 439 APAIQRAVITIGGQ 452 >ref|YP_002277129.1| ParB domain-containing protein nuclease [Gluconacetobacter diazotrophicus PAl 5] gb|ACI52514.1| ParB domain protein nuclease [Gluconacetobacter diazotrophicus PAl 5] Length = 714 Score = 739 bits (1909), Expect = 0.0, Method: Compositional matrix adjust. Identities = 366/434 (84%), Positives = 393/434 (90%) Query: 1 MATAVRKITLSSSRDIPFNKLVLSQSNVRREKAGVSIEELAEDIARRTLLQSLNVRPVLD 60 MA+AV+KI LSSSRDIPFNKLVLSQSNVRR KAGVSIEELAEDI RRTLLQ L+VRPVLD Sbjct: 1 MASAVQKIILSSSRDIPFNKLVLSQSNVRRVKAGVSIEELAEDIGRRTLLQGLSVRPVLD 60 Query: 61 AEGAETGMFEIPAGGRRYRALQLLVKQKRLAKTASVPCVVRDPATDVLAEDDSLAENIQR 120 AEGAETGMFEIPAGGRRYRAL+LLVKQKRLAKTA +PCVVRD +D+LAEDDSLAENIQR Sbjct: 61 AEGAETGMFEIPAGGRRYRALELLVKQKRLAKTAPIPCVVRDAGSDILAEDDSLAENIQR 120 Query: 121 APLHPLDQFRAFHALREKGQSEEDIAAAFFTSVNVVKQRLRLASVSPALLNVYAEDGMSL 180 APLHPLDQFRAF ALREKG+SEEDIAA+FFTSVNVVKQRLRLASVSPALL+VYAEDGMSL Sbjct: 121 APLHPLDQFRAFQALREKGRSEEDIAASFFTSVNVVKQRLRLASVSPALLDVYAEDGMSL 180 Query: 181 EQLMAFTVTADHGRQEQVWQAISGSWHKEPYQIRRMLTEKTVRASDRRAVFVGLDTYEAA 240 EQLMAFTVT DH RQEQVWQAISGSW KEPYQIRRMLTEKTVRASDRRAVFVGLD YEAA Sbjct: 181 EQLMAFTVTGDHARQEQVWQAISGSWQKEPYQIRRMLTEKTVRASDRRAVFVGLDAYEAA 240 Query: 241 GGMVLRDLFQSDDGGWLEDVALLDRLVTEKLKAEAETIAAEGWKWIEVAIDFPYGHTRGL 300 GG+VLRDLFQSDDGGWLEDVALLD LV EKLK +AE IAA GWKWIEVAIDFPYGHTRGL Sbjct: 241 GGVVLRDLFQSDDGGWLEDVALLDGLVAEKLKTQAEVIAAAGWKWIEVAIDFPYGHTRGL 300 Query: 301 RELDGVSTGLTPEEQTTIEALKAEFARLEAEHDGADELPDEVDQRLGEIETALAVFDDRP 360 REL+GV+T L+PEE IEAL AE+A++EAE+DGA+ELPDEVDQRLGEIETALA FDDRP Sbjct: 301 RELEGVATDLSPEEHAAIEALNAEYAKIEAEYDGAEELPDEVDQRLGEIETALAAFDDRP 360 Query: 361 INYQLADIARAGVFVGIDAEGTLLVDRGYVRPEDELPVAEPEQNSDGEPAAAALDGAEPL 420 + YQ ADIARAGVFVGIDAEG L VDRGYVRPEDE P +EPEQ+ D A + A+P Sbjct: 361 VIYQPADIARAGVFVGIDAEGALSVDRGYVRPEDEAPASEPEQDGDAGSAMPHTNSADPE 420 Query: 421 APAIQRAVIIVGGQ 434 PA+QRAVI +GGQ Sbjct: 421 TPAVQRAVITIGGQ 434 >ref|ZP_07026247.1| ParB domain protein nuclease [Afipia sp. 1NLS2] gb|EFI53389.1| ParB domain protein nuclease [Afipia sp. 1NLS2] Length = 708 Score = 732 bits (1889), Expect = 0.0, Method: Compositional matrix adjust. Identities = 361/434 (83%), Positives = 389/434 (89%) Query: 1 MATAVRKITLSSSRDIPFNKLVLSQSNVRREKAGVSIEELAEDIARRTLLQSLNVRPVLD 60 MATAV+KITLSSSRDIPFNKLVLSQSNVRR KAGVSIEELA+DI RRTLLQSLNVRPVLD Sbjct: 1 MATAVQKITLSSSRDIPFNKLVLSQSNVRRVKAGVSIEELAQDIGRRTLLQSLNVRPVLD 60 Query: 61 AEGAETGMFEIPAGGRRYRALQLLVKQKRLAKTASVPCVVRDPATDVLAEDDSLAENIQR 120 AEGAETGMFEIPAGGRRYRAL+LLVKQKRLAKTA VPCVVRDPATD+L EDDSLAENIQR Sbjct: 61 AEGAETGMFEIPAGGRRYRALELLVKQKRLAKTAPVPCVVRDPATDILGEDDSLAENIQR 120 Query: 121 APLHPLDQFRAFHALREKGQSEEDIAAAFFTSVNVVKQRLRLASVSPALLNVYAEDGMSL 180 APLHPLDQFRAF LREKG+SEEDIAA FF VNVVKQRLRLASV+P LL++YAEDGMSL Sbjct: 121 APLHPLDQFRAFLTLREKGRSEEDIAATFFVGVNVVKQRLRLASVAPTLLDIYAEDGMSL 180 Query: 181 EQLMAFTVTADHGRQEQVWQAISGSWHKEPYQIRRMLTEKTVRASDRRAVFVGLDTYEAA 240 EQL+AFTVTADH RQEQVWQA+SGSW KEPYQIRRMLTEKTVRASDRRAVFVGLD YEAA Sbjct: 181 EQLIAFTVTADHARQEQVWQAVSGSWQKEPYQIRRMLTEKTVRASDRRAVFVGLDAYEAA 240 Query: 241 GGMVLRDLFQSDDGGWLEDVALLDRLVTEKLKAEAETIAAEGWKWIEVAIDFPYGHTRGL 300 GG+VLRDLFQSDDGGWLED+ALLD LV EK K EAETIAAEGWKWIEVAIDFPYGHT GL Sbjct: 241 GGVVLRDLFQSDDGGWLEDIALLDGLVAEKQKTEAETIAAEGWKWIEVAIDFPYGHTHGL 300 Query: 301 RELDGVSTGLTPEEQTTIEALKAEFARLEAEHDGADELPDEVDQRLGEIETALAVFDDRP 360 REL+GV+ LT EEQ TI+ALKAE+ +LE E+DGADELPDEVD+RLGEIE ALA FDDRP Sbjct: 301 RELEGVTIDLTSEEQATIDALKAEYTKLEEEYDGADELPDEVDERLGEIEAALAAFDDRP 360 Query: 361 INYQLADIARAGVFVGIDAEGTLLVDRGYVRPEDELPVAEPEQNSDGEPAAAALDGAEPL 420 + Y ADIARAGVFV IDAEG L VDRGYVRP+DE P +PEQ+ + +PA A G +P Sbjct: 361 VTYDPADIARAGVFVSIDAEGALSVDRGYVRPQDEAPAGDPEQDGETDPATARAHGVDPD 420 Query: 421 APAIQRAVIIVGGQ 434 AP +QRAVI +GGQ Sbjct: 421 APVVQRAVITIGGQ 434 >ref|YP_673106.1| ParB family protein [Mesorhizobium sp. BNC1] gb|ABG61941.1| ParB family protein [Chelativorans sp. BNC1] Length = 714 Score = 652 bits (1682), Expect = 0.0, Method: Compositional matrix adjust. Identities = 322/434 (74%), Positives = 365/434 (84%) Query: 1 MATAVRKITLSSSRDIPFNKLVLSQSNVRREKAGVSIEELAEDIARRTLLQSLNVRPVLD 60 MATA++KITLS SRDIPFNKL LSQ+NVRR KAG+SIEELAEDIARR LLQSLNVRP++D Sbjct: 1 MATAIQKITLSPSRDIPFNKLTLSQANVRRIKAGISIEELAEDIARRGLLQSLNVRPIID 60 Query: 61 AEGAETGMFEIPAGGRRYRALQLLVKQKRLAKTASVPCVVRDPATDVLAEDDSLAENIQR 120 A+GAETG++EIPAGGRR+RAL+ LVKQKRLAKTA+VPCVVRDPAT +LAEDDSLAENIQR Sbjct: 61 ADGAETGLYEIPAGGRRFRALERLVKQKRLAKTAAVPCVVRDPATSILAEDDSLAENIQR 120 Query: 121 APLHPLDQFRAFHALREKGQSEEDIAAAFFTSVNVVKQRLRLASVSPALLNVYAEDGMSL 180 APLHPLDQFRAF ALR+KGQSEEDIAAAFFTS +VVKQRLRLASVSP LL++YA DGM+L Sbjct: 121 APLHPLDQFRAFQALRDKGQSEEDIAAAFFTSAHVVKQRLRLASVSPKLLDIYAADGMTL 180 Query: 181 EQLMAFTVTADHGRQEQVWQAISGSWHKEPYQIRRMLTEKTVRASDRRAVFVGLDTYEAA 240 EQLMAFTV +DH RQEQVW+ I+GSW KE YQIRRMLTEKTVRASDRRA+FVGLD YEAA Sbjct: 181 EQLMAFTVCSDHARQEQVWETIAGSWSKESYQIRRMLTEKTVRASDRRAMFVGLDAYEAA 240 Query: 241 GGMVLRDLFQSDDGGWLEDVALLDRLVTEKLKAEAETIAAEGWKWIEVAIDFPYGHTRGL 300 GG VLRDLF+ DDGGWL DVALLD LV KLK EAE IAAEGWKWIEVA DFPYGHT GL Sbjct: 241 GGTVLRDLFEQDDGGWLADVALLDTLVAAKLKTEAEAIAAEGWKWIEVAADFPYGHTHGL 300 Query: 301 RELDGVSTGLTPEEQTTIEALKAEFARLEAEHDGADELPDEVDQRLGEIETALAVFDDRP 360 R+++GV+ + +EQ TI+AL AE+ RLEAE++GADELPD+VD RLGEIE L D RP Sbjct: 301 RQIEGVAAERSADEQATIDALNAEYQRLEAEYEGADELPDDVDARLGEIEALLDELDTRP 360 Query: 361 INYQLADIARAGVFVGIDAEGTLLVDRGYVRPEDELPVAEPEQNSDGEPAAAALDGAEPL 420 + + DI RAGVFV I A+G L+VDRG VRP+DE P+ P+ +DG AA + EP Sbjct: 361 VIFDPCDITRAGVFVSIGADGRLVVDRGCVRPDDEAPLVLPDDETDGATAATSAQAGEPG 420 Query: 421 APAIQRAVIIVGGQ 434 R VI VGGQ Sbjct: 421 PSGTSRTVITVGGQ 434 >ref|ZP_07025855.1| ParB domain protein nuclease [Afipia sp. 1NLS2] gb|EFI52997.1| ParB domain protein nuclease [Afipia sp. 1NLS2] Length = 768 Score = 640 bits (1651), Expect = 0.0, Method: Compositional matrix adjust. Identities = 322/435 (74%), Positives = 359/435 (82%), Gaps = 1/435 (0%) Query: 1 MATAVRKITLSSSRDIPFNKLVLSQSNVRREKAGVSIEELAEDIARR-TLLQSLNVRPVL 59 MA AV+KITLSSS D+P NKL+LSQSNVRR KAGVSIEELA DIARR LLQSLNVRPVL Sbjct: 56 MAPAVQKITLSSSHDVPLNKLILSQSNVRRVKAGVSIEELAADIARRGCLLQSLNVRPVL 115 Query: 60 DAEGAETGMFEIPAGGRRYRALQLLVKQKRLAKTASVPCVVRDPATDVLAEDDSLAENIQ 119 DA G ETGMFE+PAGGRR++ALQLLVKQKRLAKTA VPCVVRDP+T++LAEDDSLAEN+Q Sbjct: 116 DANGTETGMFEVPAGGRRFKALQLLVKQKRLAKTAPVPCVVRDPSTEILAEDDSLAENVQ 175 Query: 120 RAPLHPLDQFRAFHALREKGQSEEDIAAAFFTSVNVVKQRLRLASVSPALLNVYAEDGMS 179 RAPLHPLDQFRAF LRE G S+EDIAAA+F VNVVKQRLRLA+VS LL++YAEDGMS Sbjct: 176 RAPLHPLDQFRAFQTLRENGLSDEDIAAAYFVGVNVVKQRLRLAAVSEKLLDIYAEDGMS 235 Query: 180 LEQLMAFTVTADHGRQEQVWQAISGSWHKEPYQIRRMLTEKTVRASDRRAVFVGLDTYEA 239 LEQLMAFTVT DH RQEQ W+A+ S+ +EPYQIRRMLTEKTVRASD+R FVG+ YEA Sbjct: 236 LEQLMAFTVTTDHARQEQAWEALQRSYSQEPYQIRRMLTEKTVRASDKRVQFVGVYAYEA 295 Query: 240 AGGMVLRDLFQSDDGGWLEDVALLDRLVTEKLKAEAETIAAEGWKWIEVAIDFPYGHTRG 299 GG+V+RDLFQ DDGGWLE+VALLD LV EKLKAEAE IAAEGWKWIEVA+DFPYGH +G Sbjct: 296 TGGVVMRDLFQQDDGGWLENVALLDSLVAEKLKAEAEKIAAEGWKWIEVAVDFPYGHDQG 355 Query: 300 LRELDGVSTGLTPEEQTTIEALKAEFARLEAEHDGADELPDEVDQRLGEIETALAVFDDR 359 LRELDGV LT EE+ T E L+ EF +LE ++ ADELPDEV QRLGEIETAL F+ R Sbjct: 356 LRELDGVPADLTEEERATREVLRNEFDQLEGQYQDADELPDEVGQRLGEIETALEAFEAR 415 Query: 360 PINYQLADIARAGVFVGIDAEGTLLVDRGYVRPEDELPVAEPEQNSDGEPAAAALDGAEP 419 P + ADIARAGVFV I G LLVDRGYVRPEDE P E +Q D E A+ G + Sbjct: 416 PRIFDPADIARAGVFVSIGHNGQLLVDRGYVRPEDEAPAVESDQEGDREAASVDQSGTDT 475 Query: 420 LAPAIQRAVIIVGGQ 434 PAIQRAVI +GGQ Sbjct: 476 GTPAIQRAVITIGGQ 490