BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0048.0017.p (173 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003267921.1| OsmC family protein [Haliangium ochraceum DS... 189 2e-46 ref|YP_002768611.1| hypothetical protein RER_51640 [Rhodococcus ... 160 7e-38 ref|ZP_04382230.1| conserved hypothetical protein [Rhodococcus e... 157 6e-37 ref|ZP_08205953.1| hypothetical protein SCNU_15106 [Gordonia neo... 156 9e-37 ref|ZP_01265030.1| OsmC-like protein [Candidatus Pelagibacter ub... 156 9e-37 >ref|YP_003267921.1| OsmC family protein [Haliangium ochraceum DSM 14365] gb|ACY16028.1| OsmC family protein [Haliangium ochraceum DSM 14365] Length = 177 Score = 189 bits (479), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 93/164 (56%), Positives = 113/164 (68%) Query: 1 MSFRFKQVFADTQQALGADPAQAQAVFQAHSQLGDGVNSSVTVRQFNVSVDEPPALGGED 60 MS FK F Q L + + F + S +GV S+V +R F + VDEPPAL G D Sbjct: 1 MSNDFKTFFEQMQSTLADNAHAGRVRFTSDSHQVEGVRSTVRLRNFELVVDEPPALSGTD 60 Query: 61 TAPNPVEYILAALGSCQEITYRLYADALGIPLNGVSVKLSGAIDLRGFFSVDPNVRAGFQ 120 PNPVE ILAALG+CQEITYR YAD + IPL+GV+V + G++DLRGFF+VD VR G++ Sbjct: 61 QGPNPVELILAALGTCQEITYRFYADKMDIPLHGVAVTVKGSLDLRGFFAVDDEVRPGYK 120 Query: 121 QIEAEVAIDSPASAADIARLKETVDRHCPVLDILRNPTPVDLKL 164 +IEAEV IDSPASA DIARL E V+RHCPVLD L PV K+ Sbjct: 121 EIEAEVRIDSPASAEDIARLVEEVERHCPVLDCLSRGVPVKSKV 164 >ref|YP_002768611.1| hypothetical protein RER_51640 [Rhodococcus erythropolis PR4] dbj|BAH35872.1| hypothetical protein RER_51640 [Rhodococcus erythropolis PR4] Length = 171 Score = 160 bits (405), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 76/164 (46%), Positives = 104/164 (63%) Query: 4 RFKQVFADTQQALGADPAQAQAVFQAHSQLGDGVNSSVTVRQFNVSVDEPPALGGEDTAP 63 V A A+ D ++A VF+A +Q D V S++++ ++ V VDEPPALGGE+TA Sbjct: 8 HLSSVVAANADAIDKDASKAHVVFKASAQAHDAVASTISLGKYTVEVDEPPALGGENTAA 67 Query: 64 NPVEYILAALGSCQEITYRLYADALGIPLNGVSVKLSGAIDLRGFFSVDPNVRAGFQQIE 123 NPVEY LA+L SCQ +TYR++AD LGI L+ +S + G +D+RGFF D VR GF ++ Sbjct: 68 NPVEYYLASLLSCQVVTYRVWADKLGIALDDISARAEGDLDVRGFFGFDDAVRPGFSEVR 127 Query: 124 AEVAIDSPASAADIARLKETVDRHCPVLDILRNPTPVDLKLRTG 167 V + P + L+ETVD HCPVLD+ RNP PV + T Sbjct: 128 VVVTLTGPETRERYLELQETVDAHCPVLDLTRNPVPVHTVVETA 171 >ref|ZP_04382230.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] gb|EEN89623.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] Length = 171 Score = 157 bits (397), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 75/164 (45%), Positives = 104/164 (63%) Query: 4 RFKQVFADTQQALGADPAQAQAVFQAHSQLGDGVNSSVTVRQFNVSVDEPPALGGEDTAP 63 V A A+ D ++A VF+A +Q D V S++++ +++V VDEPPALGG++TA Sbjct: 8 HLSSVVAANADAIDKDASKAHVVFKASAQAHDAVASTISLGKYSVEVDEPPALGGQNTAA 67 Query: 64 NPVEYILAALGSCQEITYRLYADALGIPLNGVSVKLSGAIDLRGFFSVDPNVRAGFQQIE 123 NPVEY LA+L SCQ +TYR++AD LGI L+ +S + G +D+RGFF D VR GF ++ Sbjct: 68 NPVEYYLASLLSCQVVTYRVWADKLGIALDDISARAEGDLDVRGFFGFDDAVRPGFSEVR 127 Query: 124 AEVAIDSPASAADIARLKETVDRHCPVLDILRNPTPVDLKLRTG 167 V + P L+ETVD HCPVLD+ RNP PV + T Sbjct: 128 VVVTLTGPEPRERYLELQETVDAHCPVLDLTRNPVPVHTVVETA 171 >ref|ZP_08205953.1| hypothetical protein SCNU_15106 [Gordonia neofelifaecis NRRL B-59395] gb|EGD54328.1| hypothetical protein SCNU_15106 [Gordonia neofelifaecis NRRL B-59395] Length = 182 Score = 156 bits (395), Expect = 9e-37, Method: Compositional matrix adjust. Identities = 75/145 (51%), Positives = 98/145 (67%) Query: 21 AQAQAVFQAHSQLGDGVNSSVTVRQFNVSVDEPPALGGEDTAPNPVEYILAALGSCQEIT 80 + AQ VF A + DGV S V +R F+V+VDEPP LGG DTAPNPVEY LAAL SCQ +T Sbjct: 35 SNAQVVFGASAVATDGVASEVALRSFSVTVDEPPTLGGSDTAPNPVEYYLAALLSCQVVT 94 Query: 81 YRLYADALGIPLNGVSVKLSGAIDLRGFFSVDPNVRAGFQQIEAEVAIDSPASAADIARL 140 YR +A+ LG+ + +++ G +D+RGFF +D VR GF + V I PAS D RL Sbjct: 95 YRFWAERLGVEFDDLTLTAEGDLDVRGFFGLDAEVRPGFTAVRVSVNISGPASDDDYRRL 154 Query: 141 KETVDRHCPVLDILRNPTPVDLKLR 165 +ETV+RHCPV D+ +PTP+ +L Sbjct: 155 QETVERHCPVQDLTVDPTPLSSELH 179 >ref|ZP_01265030.1| OsmC-like protein [Candidatus Pelagibacter ubique HTCC1002] gb|EAS84130.1| OsmC-like protein [Candidatus Pelagibacter ubique HTCC1002] Length = 183 Score = 156 bits (395), Expect = 9e-37, Method: Compositional matrix adjust. Identities = 74/162 (45%), Positives = 106/162 (65%) Query: 1 MSFRFKQVFADTQQALGADPAQAQAVFQAHSQLGDGVNSSVTVRQFNVSVDEPPALGGED 60 MS K+ ++ Q+ A+P A ++++S L +G+ S VT+R+ + VDEP + GG+D Sbjct: 1 MSNNLKETISNLQKDFTANPKNAVVQYESNSILKEGLQSVVTLREHKLVVDEPKSFGGKD 60 Query: 61 TAPNPVEYILAALGSCQEITYRLYADALGIPLNGVSVKLSGAIDLRGFFSVDPNVRAGFQ 120 P+PVE ILAAL +CQEITY+ +A A GI + VSVKL G +DL+GF +++ N R GFQ Sbjct: 61 EGPSPVELILAALATCQEITYKAFATAAGINIESVSVKLKGELDLQGFLALNKNTRPGFQ 120 Query: 121 QIEAEVAIDSPASAADIARLKETVDRHCPVLDILRNPTPVDL 162 I V I S + A+I +L +TV+ HCPVLDIL P+ L Sbjct: 121 SISGTVDIKSSSPKAEIDKLIDTVNTHCPVLDILSKGVPIKL 162