BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0048.0009.p (608 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001205387.1| hypothetical protein BRADO3366 [Bradyrhizobi... 585 e-165 ref|YP_001239855.1| hypothetical protein BBta_3874 [Bradyrhizobi... 559 e-157 ref|NP_770784.1| hypothetical protein bll4144 [Bradyrhizobium ja... 543 e-152 ref|YP_001526573.1| hypothetical protein AZC_3657 [Azorhizobium ... 216 8e-54 ref|YP_003693060.1| hypothetical protein Snov_1121 [Starkeya nov... 202 1e-49 >ref|YP_001205387.1| hypothetical protein BRADO3366 [Bradyrhizobium sp. ORS 278] emb|CAL77157.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278] Length = 681 Score = 585 bits (1509), Expect = e-165, Method: Compositional matrix adjust. Identities = 307/610 (50%), Positives = 406/610 (66%), Gaps = 18/610 (2%) Query: 1 MKKILLGLIAVAVLAAGSYFGFDFYAQRRVTRDVEAAFEQVRATGAKASHGKITFDVKSR 60 MK+IL+ +AV VL G +YAQ R R+VEA+F Q+R GA ASHGK+ FD+ SR Sbjct: 11 MKRILIATVAVVVLGIAGLVGVPWYAQSRAEREVEASFAQIRQNGATASHGKVAFDLWSR 70 Query: 61 TLTIADVATESGTQSPVSVKIANLTMTGLGQTDAARVSAGNVEFSDVEIGVAGPTPTITS 120 LTIADV ES Q P S+ +T GL Q D V+A ++E SDV + P P+ Sbjct: 71 KLTIADVKVESAAQPPASISFGAITAMGLSQPDGDHVAASSIELSDVAMSGQMPGPSAIR 130 Query: 121 LTYKASRITVKDYSGPTSLPQLPAASSILELYRSAFGLLASINASSVAAPSLTGTMTFSA 180 L+YK +I +KDY+GP LPA S LE YR+ A+I+ASS+ P GTM Sbjct: 131 LSYKLPQIVLKDYAGPVRFAALPAGSGPLETYRTLMQQFATISASSIILPRAEGTMEGGP 190 Query: 181 AAKAGDGAGGEFAYSGIAIENIKDGKIASSKTDKVVFTINQQT--------AGKP---IK 229 AA A EF YSG I+NIKDG+IAS K D + FT++ Q AG+P K Sbjct: 191 AAAAPA----EFTYSGFTIDNIKDGRIASYKLDGLAFTMSMQQPANKLAAGAGQPGRIEK 246 Query: 230 MTGELANIAATDIDVGAMAAIFDPGKASDDREYRVQGHVSAGPYVITAAPGVNMRIEGVT 289 + G + +I DID AM A+ P A DDR YRV G V+AG Y + + GV MR+EG++ Sbjct: 247 LQGRVTDIVHHDIDANAMLAVLSPEAAKDDRVYRVYGRVTAGAYEVNSDSGVRMRMEGIS 306 Query: 290 VDDTRINPSRMQLPALLAMIPQQGSPPPSAAQARDLLDKIAGLYSGIGIANAEMHGLSVE 349 D+ + PSR+QLPAL A +P + P+ QARD+++K+AG+Y GI + NAEM GL++E Sbjct: 307 ADEFSVRPSRLQLPALFAALPASTAVEPTPEQARDIMEKVAGVYEGIALKNAEMRGLAIE 366 Query: 350 TPQGPLKLASMRFNFEHGKIGELAVEGLDTRAPNGPIKVGRFALKSLDVANFMRLSAQFA 409 TPQGP+KLA++RF+ GK GE+AVEG D +PNGPIK+GRFALK D+A+ +R SA+FA Sbjct: 367 TPQGPVKLAAVRFDLRDGK-GEVAVEGFDGPSPNGPIKLGRFALKGFDIASLLRFSAKFA 425 Query: 410 AQ--KPSAEQALALFPLIEGVEIKGVASPYKATGKPVNIDVLSLDWGQFVGSIPSKLRLT 467 AQ KP+ +A+ LF L+EG+E+KG+ +PYKA KPV ID +SLDWGQFVG IP+K RL Sbjct: 426 AQGAKPAPAEAVVLFKLLEGIELKGLTAPYKAGDKPVQIDNVSLDWGQFVGPIPTKARLV 485 Query: 468 AKLAAPLDAADPRQQPLVAAGIDRMAVDADLGAIWTEASRAFALEPVKLDMAGLLNASAK 527 AK+A PLD ++P PL+ AGID AVDADLG WTE++ FALEP KL+++ L+ ASA Sbjct: 486 AKMAGPLDPSNPALLPLLVAGIDSAAVDADLGLGWTESAATFALEPFKLEVSNLVAASAN 545 Query: 528 VTLDNVPREAFSTSAAEAMGAAAQIETGTIELTVHDLGVIDLAIAQFARTQSVSRDEARK 587 ++L VPRE F+T +A AAAQIE G + L+V DLGV+D+ +A +AR ++ RD ARK Sbjct: 546 LSLAQVPREVFTTDLQQATTAAAQIEAGGLGLSVRDLGVVDVLVANYARGHAIPRDAARK 605 Query: 588 AILDGIKAQG 597 A++D IKA G Sbjct: 606 ALVDSIKAIG 615 >ref|YP_001239855.1| hypothetical protein BBta_3874 [Bradyrhizobium sp. BTAi1] gb|ABQ35949.1| putative exported protein of unknown function [Bradyrhizobium sp. BTAi1] Length = 659 Score = 559 bits (1440), Expect = e-157, Method: Compositional matrix adjust. Identities = 276/600 (46%), Positives = 402/600 (67%), Gaps = 10/600 (1%) Query: 1 MKKILLGLIAVAVLAAGSYFGFDFYAQRRVTRDVEAAFEQVRATGAKASHGKITFDVKSR 60 M +I+ G++ VL ++ G +YAQ R R+VEA+F Q+R GA ASHG++ FD+ +R Sbjct: 1 MNRIVAGVLVAIVLGTAAFLGVPWYAQNRAEREVEASFAQIRQNGATASHGRVVFDLWTR 60 Query: 61 TLTIADVATESGTQSPVSVKIANLTMTGLGQTDAARVSAGNVEFSDVEIGVAGPTPTITS 120 L+IADV ES TQ P S+ + ++T TGL Q D V+A ++E SDV + P P+ Sbjct: 61 KLSIADVKIESATQPPASITLGSVTATGLSQPDQEHVTAASLEVSDVAMAAQIPGPSPLR 120 Query: 121 LTYKASRITVKDYSGPTSLPQLPAASSILELYRSAFGLLASINASSVAAPSLTGTMTFSA 180 L YK ++ VKDY+GP +PA ++++E YR+ A+I+A+S+ P TGTM Sbjct: 121 LNYKLPQLVVKDYAGPVRFAAIPAGATLVETYRALAQQFAAISAASITVPRTTGTM---- 176 Query: 181 AAKAGDGAG-GEFAYSGIAIENIKDGKIASSKTDKVVFTIN-QQTAGKPIKMTGELANIA 238 + G AG EF+YSG++++ IK G+IAS K D++ F+++ QQ AGK +M G + +I Sbjct: 177 --EGGPSAGPAEFSYSGLSVDQIKAGRIASYKLDELAFSMSPQQPAGKTDRMQGRITDIV 234 Query: 239 ATDIDVGAMAAIFDPGKASDDREYRVQGHVSAGPYVITAAPGVNMRIEGVTVDDTRINPS 298 D+D A+ A DP A DDR YRV G V+ G Y + + GV MR++G++ D+ + PS Sbjct: 235 HHDVDANAIVAALDPDAAKDDRTYRVYGRVTTGAYEVNSDSGVRMRMDGISADEFSVRPS 294 Query: 299 RMQLPALLAMIPQQGSPPPSAAQARDLLDKIAGLYSGIGIANAEMHGLSVETPQGPLKLA 358 R+QLPAL A +P + P+ Q R+L+DKIAG+Y G+ + NAEM GLS+ETPQGP+KLA Sbjct: 295 RLQLPALFAALPASTAVQPTPEQTRELMDKIAGIYDGMALRNAEMRGLSIETPQGPIKLA 354 Query: 359 SMRFNFEHGKIGELAVEGLDTRAPNGPIKVGRFALKSLDVANFMRLSAQFA-AQKPSAEQ 417 ++RF+ GK ++AVEG D R+PNGP+K+GRFALK D+A MRL ++++ KP+ Sbjct: 355 ALRFDLRDGK-SDIAVEGFDGRSPNGPVKLGRFALKGFDLAGLMRLGSKYSPGTKPAPAD 413 Query: 418 ALALFPLIEGVEIKGVASPYKATGKPVNIDVLSLDWGQFVGSIPSKLRLTAKLAAPLDAA 477 A+ LF L++G+E+K + +PYKA KPV ID ++LDWGQ+VG IP++ RL AK+A PLD + Sbjct: 414 AVVLFKLLDGIELKALTAPYKAGDKPVQIDNITLDWGQYVGPIPTRARLVAKMAGPLDPS 473 Query: 478 DPRQQPLVAAGIDRMAVDADLGAIWTEASRAFALEPVKLDMAGLLNASAKVTLDNVPREA 537 +P PL+ AGID A DADLG WTE++ FA+ P KL+++ L+ ASA V+L VPR+ Sbjct: 474 NPALLPLLVAGIDTAAFDADLGLGWTESTGRFAVSPFKLEVSNLVAASANVSLAQVPRDV 533 Query: 538 FSTSAAEAMGAAAQIETGTIELTVHDLGVIDLAIAQFARTQSVSRDEARKAILDGIKAQG 597 F+ +A AAAQIE ++ ++ DLG +D+ +A +AR + RD ARKA++D IKA G Sbjct: 534 FTIDLQQATTAAAQIEAEGLDFSLRDLGAVDVLVANYARGHGIPRDAARKALIDSIKAIG 593 >ref|NP_770784.1| hypothetical protein bll4144 [Bradyrhizobium japonicum USDA 110] dbj|BAC49409.1| bll4144 [Bradyrhizobium japonicum USDA 110] Length = 701 Score = 543 bits (1399), Expect = e-152, Method: Compositional matrix adjust. Identities = 280/601 (46%), Positives = 393/601 (65%), Gaps = 15/601 (2%) Query: 1 MKKILLGLIAVAVLAAGSYFGFDFYAQRRVTRDVEAAFEQVRATGAKASHGKITFDVKSR 60 MK+IL+GLIA+AVLAAG +FGF+ YA+ R T ++EA F+++R+ G KASHGK+ FDV SR Sbjct: 46 MKRILIGLIALAVLAAGGWFGFNLYARHRATAEIEAVFDRIRSQGGKASHGKVAFDVTSR 105 Query: 61 TLTIADVATESGTQSPVSVKIANLTMTGLGQTDAARVSAGNVEFSDVEIGVAGPTPTITS 120 TLTI D+A + Q VKI + GL QTD R +A ++E S E+ + P Sbjct: 106 TLTIEDIAVDPAGQPQAHVKITGIKGVGLRQTDETRFAADSIEISGFEVALDEVGPGKLK 165 Query: 121 LTYKASRITVKDYSGPTSLPQLPAASSILELYRSAFGLLASINASSVAAPSLTGTMTFSA 180 +YK ++ ++DY+GP PA+ S+++LYR AS+ ASS+ AP+LT Sbjct: 166 ASYKVPQLIMRDYAGPARAQNAPASGSLIDLYRFVLDQYASVTASSITAPTLT------I 219 Query: 181 AAKAGDGAGG--EFAYSGIAIENIKDGKIASSKTDKVVFTINQQTAGKPIKMTGELANIA 238 A AG GA G E YSG+AI+ + GKI + K D+ FTIN + AGK K+TGE++++ Sbjct: 220 AFDAGKGAAGSGEIVYSGLAIQKLGKGKIDAMKADRATFTINVEQAGKADKLTGEMSDLI 279 Query: 239 ATDIDVGAMAAIFDPGKASDDREYRVQGHVSAGPYVITAAPGVNMRIEGVTVDDTRINPS 298 D D A+AA DP KA+DD +RV GH+S+G YV T+ GV M+++G+ + D + PS Sbjct: 280 INDFDSTAIAAALDPQKANDDSYHRVYGHMSSGTYVATSTQGVRMQVDGIAIADIAVQPS 339 Query: 299 RMQLPALLAMIPQQGSPPPSAAQARDLLDKIAGLYSGIGIANAEMHGLSVETPQGPLKLA 358 + + +LA++P GS P+ AQ+R++++K+AGLY G+ + E+ +S+ TPQG +L Sbjct: 340 KFRPAEILALLPTDGSVQPTPAQSREMMEKLAGLYDGLRVGKIEIGTVSMTTPQGTPRLR 399 Query: 359 SMRFNFEHGKIGELAVEGLDTRAPNGPIKVGRFALKSLDVANFMRLSAQFA--AQKPSAE 416 ++R+ + GE A+EGLD P G +K+ RFALKSL +AN R +A Q PS + Sbjct: 400 AIRY-----QEGEFALEGLDAPTPQGQVKMERFALKSLSLANLFRWAASLTTPGQAPSPD 454 Query: 417 QALALFPLIEGVEIKGVASPYKATGKPVNIDVLSLDWGQFVGSIPSKLRLTAKLAAPLDA 476 Q L LF ++EG EIKGV SPYK T + V ID +SL+WGQ VGSIPSK+ L K+ AP D Sbjct: 455 QMLGLFRVLEGAEIKGVVSPYKNTRQLVTIDTISLNWGQLVGSIPSKVSLVVKMVAPTDP 514 Query: 477 ADPRQQPLVAAGIDRMAVDADLGAIWTEASRAFALEPVKLDMAGLLNASAKVTLDNVPRE 536 +P Q PL AGID++A++ DLGA WTE+S A AL P +D+ L A A++ L NVPR Sbjct: 515 TNPAQLPLTMAGIDKLAINLDLGAAWTESSGALALAPATIDLGNLAKAQARLALANVPRG 574 Query: 537 AFSTSAAEAMGAAAQIETGTIELTVHDLGVIDLAIAQFARTQSVSRDEARKAILDGIKAQ 596 F+ +AM A QIE G IEL++ D GV+DL +AQF+R Q+VSRD AR AI++ I+AQ Sbjct: 575 VFTADPVQAMSQAGQIEAGAIELSLRDSGVVDLLVAQFSRMQNVSRDAARGAIVEMIRAQ 634 Query: 597 G 597 G Sbjct: 635 G 635 >ref|YP_001526573.1| hypothetical protein AZC_3657 [Azorhizobium caulinodans ORS 571] dbj|BAF89655.1| conserved hypothetical protein [Azorhizobium caulinodans ORS 571] Length = 684 Score = 216 bits (551), Expect = 8e-54, Method: Compositional matrix adjust. Identities = 168/622 (27%), Positives = 295/622 (47%), Gaps = 40/622 (6%) Query: 1 MKKILLGLIAVAVLAAGSYFGFDFYAQRRVTRDVEAAFEQVRATGAKASHGKITFDVKSR 60 MKK+++ + +AVL G YFGFD + Q R DVE F +R GA+AS+ + F + R Sbjct: 7 MKKVIITVAVIAVLGVGGYFGFDRFVQMRARNDVETVFASLRQKGAQASYKDVAFTLSGR 66 Query: 61 TLTIADVATESGTQSPVSVKIANLTMTGLGQTDAARVSAGNVEFSDVEIGVAGPTPTITS 120 LT+ + +G + VK+ L + V A +VE + + + V P T Sbjct: 67 RLTVTGIEI-TGPAAGQQVKLERLDAQEVTSPSGGTVQAKSVELTGLSVAVTDPLAAQTK 125 Query: 121 LTYKASRITVKDYSGPTSLPQLPAASSILELYRSAFGLLASINASSVAAPSLTGTMTFSA 180 +TY A ++++ YSGP +P +P S + R L ++ SV+ P L+G +T Sbjct: 126 VTYSAPQVSLVGYSGPDRMPAVPPGSKATQALRDGLVLFGAVRIDSVSIPKLSGDVTPPP 185 Query: 181 AAKAGD---GAGGEFAYSGIAIENIKDGKIASSKTDKVVFTINQQTAGKPIKMTGELANI 237 A GD A F Y + I +G+IA K K++ + + + ++A++ Sbjct: 186 A--QGDKPAAAPSSFTYEALTASGIGEGRIAELKVGKMLVSTTTVIEATTVPVVVDVADL 243 Query: 238 AATDIDVGAMAAIFD--PGKASDDREYRVQGHVSAGPYVITAAPGVNMRIEGVTVDDTRI 295 A+ ID G + + D P +S Y +S G Y + ++ I Sbjct: 244 RASGIDTGPIRMLTDAEPKASSPLPIYE---KISTGAYRLRHKETNLFSAGSLSAQRVAI 300 Query: 296 NPSRMQLPAL--LAMIPQQGSPPPS--AAQARDLLDKIAGLYSGIGIANAEMHGLSVETP 351 NP ++ + L L+ + QQ PPS Q ++++ + G + ++ +++ Sbjct: 301 NPEKLSIERLQQLSALAQQ---PPSDDPKQVVAIVERTLPVIDGFAVGQISVNDIALAEK 357 Query: 352 QGPLKLASMRFN-FEHGKIGELAVEGLDTRAP-NGPIKVGRFALKSLDVANFMRLSAQFA 409 +K+A+M F G++ L V GL ++ P P V R A+ L + + + SA A Sbjct: 358 DAAVKIAAMNMKGFVDGRLETLEVLGLTSQLPGEKPSTVKRAAILGLSLKSILEQSAAMA 417 Query: 410 AQKPSAE-----QALALFPLIEGVEIKGVASPYKATGKPVNIDVLSLDWGQFVGSIPSKL 464 ++ E + A+ G E++G+ +PY A GK V+I+ +SL WG F G +P+++ Sbjct: 418 SKDDKNELIALNASAAVLKSFSGFELEGLEAPYDANGKMVSIEKMSLSWGDFTGLLPTRV 477 Query: 465 --RLTAKLAAPLDAADPRQQP---LVAAGIDRMAVDADLGAIWTEASRAFALEPVKLDMA 519 RL K++ P+ A D +P L AAG+DR ++ + L + +R+ AL P L++ Sbjct: 478 AFRLD-KVSGPISAED--GEPFSYLAAAGMDRTSISSVLNLSYDANARSLALAPASLELE 534 Query: 520 GLLNASAKVTLDNVPREAFSTSAAEAMGAAA-------QIETGTIELTVHDLGVIDLAIA 572 +A + L+NVP++ F + + M + G + +TV DLG+ +L + Sbjct: 535 KAFSAKIEARLENVPKDVFDAAPQDVMNNPTAILAKLQNVTAGALSVTVTDLGLANLMLK 594 Query: 573 QFARTQSVSRDEARKAILDGIK 594 Q A V ++ R ++ GI+ Sbjct: 595 QQAELAGVEPEDLRSELISGIQ 616 >ref|YP_003693060.1| hypothetical protein Snov_1121 [Starkeya novella DSM 506] gb|ADH88441.1| hypothetical protein Snov_1121 [Starkeya novella DSM 506] Length = 662 Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 170/602 (28%), Positives = 279/602 (46%), Gaps = 35/602 (5%) Query: 2 KKILLGLIAVAVLAAGSYFGFDFYAQRRVTRDVEAAFEQVRATGAKASHGKITFDVKSRT 61 K ++ +A+ V G YFGF+ VEA +RA G +A G++ +DV Sbjct: 3 KTFVVAFVALLVAGVGGYFGFNLLVGHLARSHVEAVLANLRANGMEAQAGEVDYDVFEGR 62 Query: 62 LTIADVATESGTQSPVSVKIANLTMTGLGQTDAARVSAGNVEFSDVEIGVAGPTPTITSL 121 + D+A + Q S+KIA+ TG+ + +RV A +V I GP P ++ Sbjct: 63 FEMHDLAVAAPGQG--SLKIASFLATGVERPSPSRVFAKHVAIQG--IAFDGPLPLAPAI 118 Query: 122 --TYKASRITVKDYSGPTSLPQLPAASSILELYRSAFGLLASINASSVAAPSLTGTMTFS 179 +Y+A R+ + P +P A ++ A G +NA + P T S Sbjct: 119 EASYRAPRLDIAALEMPAEVPGGGTA------WQVALGFFEKVNADRIIIPE----STVS 168 Query: 180 AAAKAGDGA-GGEFAYSGIAIENIKDGKIASSKTDKVVFTINQQTAGKPIKM-TGELANI 237 + AGD + + + +E + DG+ A++ + FTI G P G L I Sbjct: 169 TRSGAGDSCIETDVIHGAVGLERLADGRFATAGMEPSRFTIG----GAPTNAGHGSLGRI 224 Query: 238 AATDIDVGAMAAIFDPGKASDDREYR-VQGHVSAGPYVITAAPGVNMRIEGVTVDDTRIN 296 +A IDVGAM + DP + E+R V G +S Y + G+ +TV D I Sbjct: 225 SAEGIDVGAMLLMLDPERRQAVDEFRTVYGAISVDGYEVVTDAGLRQSWRSLTVRDVAIR 284 Query: 297 PSRMQLPALLAM---IPQQGS--PPPSAAQARDLLDKIAGLYSGIGIANAEMHGLSVETP 351 PS + LL M I + S PS + +L+ +AGLY G+ IA+ G+ P Sbjct: 285 PSVIPAEELLEMGRRIQELASRDENPSPEETAELMRAMAGLYDGLNIASITFDGMEGTEP 344 Query: 352 QG-PLKLASMRFN-FEHGKIGELAVEGLD-TRAPNGPIKVGRFALKSLDVANFMRLSAQF 408 G LAS++ + G++ +L++E L+ T A P +V R + L M ++A Sbjct: 345 DGSKATLASLQAGPLDSGRLEKLSLERLEGTEADGKPFRVERLLIGGLRPGAMMEVAAGL 404 Query: 409 AAQKPSAEQALA-LFPLIEGVEIKGVASPYKATGKPVNIDVLSLDWGQFVGSIPSKLRLT 467 S A LF ++ VE+ +P +G+P+ +D L++ W ++P+ L T Sbjct: 405 TTDPRSLVGWPAPLFSMVGTVELDDAEAP-TGSGEPLTVDKLAVSWTGETDALPTSLSAT 463 Query: 468 AKLAAPLDAADPRQQP--LVAAGIDRMAVDADLGAIWTEASRAFALEPVKLDMAGLLNAS 525 ++ P A DP LV + R+ V D+ A W EA R L+P L+++ S Sbjct: 464 LRMTGPTTAVDPGNTAFALVPDQMKRVNVAMDVNARWNEAERTATLDPFYLEVSDAFAVS 523 Query: 526 AKVTLDNVPREAFSTSAAEAMGAAAQIETGTIELTVHDLGVIDLAIAQFARTQSVSRDEA 585 AK++L++V FS EA+ A + G++++TV D G+ + + + AR Q + +E Sbjct: 524 AKLSLNDVDDSVFSPQPDEALAGAGAVNLGSLDITVTDSGLYEQKLEEAAREQGIKPEEI 583 Query: 586 RK 587 R+ Sbjct: 584 RQ 585