BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0048.0007.p         (150 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001239857.1| hypothetical protein BBta_3877 [Bradyrhizobi...   214   4e-54
ref|NP_770786.1| hypothetical protein blr4146 [Bradyrhizobium ja...   198   3e-49
ref|YP_001205389.1| hypothetical protein BRADO3368 [Bradyrhizobi...   197   3e-49
ref|YP_577366.1| DoxX [Nitrobacter hamburgensis X14] >gi|9180053...   171   3e-41
ref|YP_570073.1| DoxX [Rhodopseudomonas palustris BisB5] >gi|916...   166   1e-39

>ref|YP_001239857.1| hypothetical protein BBta_3877 [Bradyrhizobium sp. BTAi1]
 gb|ABQ35951.1| putative membrane protein of unknown function [Bradyrhizobium sp.
           BTAi1]
          Length = 151

 Score =  214 bits (545), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 103/151 (68%), Positives = 127/151 (84%), Gaps = 1/151 (0%)

Query: 1   MPAFITFGRILFAVLFLYSGASKLFGIQATADLLAAKVTIPAVVAPYTQQIEASVGMPFM 60
           MP FITFGR+LFAV+F+Y+GA+KLFGIQATADL+AAKVTIPAV+APY  Q+EA+  MP  
Sbjct: 1   MPGFITFGRVLFAVIFIYTGATKLFGIQATADLIAAKVTIPAVLAPYAAQLEAAAKMPMP 60

Query: 61  QLLAITIGGFEIVAGLMIAVNVLARFFAILLIIFVCFATFYFHDFWNQPAPDNVRTLIDA 120
           Q+LAI  G FE++AG+MIA+N+L R FA+L+I+FV    FYFHDFWNQ  PDN +TLIDA
Sbjct: 61  QILAIAAGAFEVLAGVMIALNILGRLFALLMIVFVGATIFYFHDFWNQTPPDNAKTLIDA 120

Query: 121 LKNLSLIGALFIIAGYGRGPRR-DDPAYGDV 150
           LKNLS+IGALFII GYG+GP+  +  AYGD+
Sbjct: 121 LKNLSIIGALFIIFGYGKGPKAPEQRAYGDI 151


>ref|NP_770786.1| hypothetical protein blr4146 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC49411.1| blr4146 [Bradyrhizobium japonicum USDA 110]
          Length = 150

 Score =  198 bits (503), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 96/150 (64%), Positives = 118/150 (78%)

Query: 1   MPAFITFGRILFAVLFLYSGASKLFGIQATADLLAAKVTIPAVVAPYTQQIEASVGMPFM 60
           MPAF+TFGRILFAVLF+Y+GA+KLF IQATAD +A KV +P ++APY +QIE +  M   
Sbjct: 1   MPAFVTFGRILFAVLFIYTGATKLFAIQATADFIATKVVVPDIIAPYAKQIETATAMTTP 60

Query: 61  QLLAITIGGFEIVAGLMIAVNVLARFFAILLIIFVCFATFYFHDFWNQPAPDNVRTLIDA 120
           QLLAI +G  EI+AGLMIA+N  ARFFA+LLI++V  AT  F+DFWN  APDN + L+DA
Sbjct: 61  QLLAIAVGALEIIAGLMIALNFGARFFAMLLIVYVAVATVLFYDFWNLAAPDNAKMLVDA 120

Query: 121 LKNLSLIGALFIIAGYGRGPRRDDPAYGDV 150
           LKNLS+IGAL +I GYGR  R  + AYGDV
Sbjct: 121 LKNLSIIGALCMIIGYGRATRPVEAAYGDV 150


>ref|YP_001205389.1| hypothetical protein BRADO3368 [Bradyrhizobium sp. ORS 278]
 emb|CAL77159.1| conserved hypothetical protein; putative membrane protein
           [Bradyrhizobium sp. ORS 278]
          Length = 151

 Score =  197 bits (502), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 105/151 (69%), Positives = 125/151 (82%), Gaps = 1/151 (0%)

Query: 1   MPAFITFGRILFAVLFLYSGASKLFGIQATADLLAAKVTIPAVVAPYTQQIEASVGMPFM 60
           MP FITFGR+LFAV+F+YSGA+KL GI ATADL+A KVTIPA +APY  Q+EA+  MP  
Sbjct: 1   MPGFITFGRVLFAVIFIYSGATKLLGIPATADLIATKVTIPAAIAPYAAQLEAAAKMPMP 60

Query: 61  QLLAITIGGFEIVAGLMIAVNVLARFFAILLIIFVCFATFYFHDFWNQPAPDNVRTLIDA 120
           Q+LAI  G FE++AGLMIA+N+L RFFA LLIIFV    FYFHDFWNQPAPDNV+ LIDA
Sbjct: 61  QILAIAAGAFEVLAGLMIALNILGRFFAALLIIFVGATIFYFHDFWNQPAPDNVKALIDA 120

Query: 121 LKNLSLIGALFIIAGYGRGPR-RDDPAYGDV 150
           LKNLS+IGALF+I GYG+GP+  +  AYGD+
Sbjct: 121 LKNLSIIGALFMIFGYGKGPKVPEQSAYGDL 151


>ref|YP_577366.1| DoxX [Nitrobacter hamburgensis X14]
 gb|ABE62906.1| DoxX [Nitrobacter hamburgensis X14]
          Length = 150

 Score =  171 bits (434), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 84/149 (56%), Positives = 110/149 (73%)

Query: 1   MPAFITFGRILFAVLFLYSGASKLFGIQATADLLAAKVTIPAVVAPYTQQIEASVGMPFM 60
           MPAFIT GR+LF+VLF+ SGASKLF I ATA+ +A+KV IPAV+  +T QIE   G+P  
Sbjct: 1   MPAFITVGRVLFSVLFIVSGASKLFDIAATAEGIASKVVIPAVLTGFTTQIEGLTGLPTA 60

Query: 61  QLLAITIGGFEIVAGLMIAVNVLARFFAILLIIFVCFATFYFHDFWNQPAPDNVRTLIDA 120
            +LAI +G  E++ G+ IA+N+ ARFF+ +L +F+  ATFY+HDFWNQ  P+    +I A
Sbjct: 61  HMLAIAVGALELICGVFIALNLGARFFSWVLAVFIVVATFYYHDFWNQTGPEARNNMIHA 120

Query: 121 LKNLSLIGALFIIAGYGRGPRRDDPAYGD 149
           LKNLSLIGALFIIAG  R P + +P  G+
Sbjct: 121 LKNLSLIGALFIIAGIDRRPPKAEPIGGE 149


>ref|YP_570073.1| DoxX [Rhodopseudomonas palustris BisB5]
 gb|ABE40172.1| DoxX [Rhodopseudomonas palustris BisB5]
          Length = 150

 Score =  166 bits (419), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 85/151 (56%), Positives = 106/151 (70%), Gaps = 2/151 (1%)

Query: 1   MPAFITFGRILFAVLFLYSGASKLFGIQATADLLAAKVTIPAVVAPYTQQIEA-SVGMPF 59
           MPAFI  GR LF+VLF++SGASKL  I AT  +   K+ IP ++  YT Q+E  + GMPF
Sbjct: 1   MPAFIALGRFLFSVLFIFSGASKLLDIAATTQM-TQKIVIPEMLTTYTSQLEGLAGGMPF 59

Query: 60  MQLLAITIGGFEIVAGLMIAVNVLARFFAILLIIFVCFATFYFHDFWNQPAPDNVRTLID 119
            Q+LAI  G  E++ G++IA+N  ARFFA++LI+FV    +Y+HDFWNQ   D    LI 
Sbjct: 60  AQMLAIAAGATELLCGILIALNFGARFFALILILFVAMTIYYYHDFWNQTGVDAQNNLIH 119

Query: 120 ALKNLSLIGALFIIAGYGRGPRRDDPAYGDV 150
           ALKNLSLIG LFIIAG GRG R  +PAY DV
Sbjct: 120 ALKNLSLIGGLFIIAGIGRGARPAEPAYNDV 150