BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0048.0004.p (269 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_487663.1| ABC transporter related [Rhodopseudomonas palus... 464 e-129 ref|YP_001208668.1| ABC transporter ATP-binding protein [Bradyrh... 414 e-114 ref|NP_883687.1| ATP-binding component of ABC transporter [Borde... 398 e-109 ref|NP_888996.1| taurine ABC transporter ATP-binding protein [Bo... 396 e-108 ref|YP_001631516.1| putative ABC-transport protein, ATP-binding ... 392 e-107 >ref|YP_487663.1| ABC transporter related [Rhodopseudomonas palustris HaA2] gb|ABD08752.1| ABC transporter related [Rhodopseudomonas palustris HaA2] Length = 276 Score = 464 bits (1194), Expect = e-129, Method: Compositional matrix adjust. Identities = 223/266 (83%), Positives = 241/266 (90%) Query: 4 RARFDKVSLAFETPKGRLNVVEDVSYDINDGDFIAVIGPSGCGKTTMMSMLAGFQKPTTG 63 RA+FD VSLAF+T KG+L VVEDVSY I+DGDF+AVIGPSGCGKTTMMSMLAGF KPT G Sbjct: 11 RAQFDHVSLAFDTAKGKLQVVEDVSYAIDDGDFVAVIGPSGCGKTTMMSMLAGFVKPTGG 70 Query: 64 TVLFDGQPVAGPGPERGVIFQEYGVFPWLTVKQNIAFGLTLRANHVAAGERDSICDHYLG 123 VLFDG PV GPGPERGVIFQEYGVFPWLTV+QNIAFGL L AN V ERD+ICDHYL Sbjct: 71 RVLFDGAPVKGPGPERGVIFQEYGVFPWLTVRQNIAFGLGLDANRVPPAERDAICDHYLA 130 Query: 124 LMGLSDFANSYPKHLSGGMRQRLAIARAYAVKPQFLLMDEPFGALDAQTRSNMQNLLLKV 183 LMGL+DFAN+YPKHLSGGMRQRLAIARAYAVKPQFLLMDEPFGALDAQTRS+MQNLLL+V Sbjct: 131 LMGLADFANAYPKHLSGGMRQRLAIARAYAVKPQFLLMDEPFGALDAQTRSSMQNLLLQV 190 Query: 184 LQTEGKTVMLITHSVEEAIYLASRIVVVTARPARIRQIIDVPFAYPRDESIQERPEFGEL 243 L TE KTVMLITHSVEEAIYLAS+I+VVTARP+RI+QII+VPF YPRDESIQER EFGEL Sbjct: 191 LATENKTVMLITHSVEEAIYLASKIIVVTARPSRIKQIIEVPFPYPRDESIQERKEFGEL 250 Query: 244 RSHIKHLVMDEYRAQQAQMRPVSFSE 269 RS I+ LVM EYR QQAQ RPVSFS+ Sbjct: 251 RSVIRELVMSEYRNQQAQARPVSFSD 276 >ref|YP_001208668.1| ABC transporter ATP-binding protein [Bradyrhizobium sp. ORS 278] emb|CAL80453.1| Putative ABC transporter, ATP-binding protein [Bradyrhizobium sp. ORS 278] Length = 274 Score = 414 bits (1064), Expect = e-114, Method: Compositional matrix adjust. Identities = 192/257 (74%), Positives = 224/257 (87%) Query: 4 RARFDKVSLAFETPKGRLNVVEDVSYDINDGDFIAVIGPSGCGKTTMMSMLAGFQKPTTG 63 RARFD VSL F+T GRL V++D+SYDI++G+F+AVIGPSGCGKTTMM+MLAGFQ PT+G Sbjct: 9 RARFDHVSLGFDTKGGRLTVIDDISYDIDEGEFVAVIGPSGCGKTTMMNMLAGFQAPTSG 68 Query: 64 TVLFDGQPVAGPGPERGVIFQEYGVFPWLTVKQNIAFGLTLRANHVAAGERDSICDHYLG 123 +LFD +PV GP PERGVIFQ+YGVFPWLTV+ NIAFGL L+AN V A ERD IC HYL Sbjct: 69 RILFDDRPVTGPSPERGVIFQDYGVFPWLTVRDNIAFGLRLKANRVPAAERDEICAHYLA 128 Query: 124 LMGLSDFANSYPKHLSGGMRQRLAIARAYAVKPQFLLMDEPFGALDAQTRSNMQNLLLKV 183 LMGLS+FAN+YPKHLSGGMRQRLAIARAYAVKP+FLLMDEPFGALDAQTR +MQ+LLL+V Sbjct: 129 LMGLSEFANAYPKHLSGGMRQRLAIARAYAVKPRFLLMDEPFGALDAQTRIHMQSLLLRV 188 Query: 184 LQTEGKTVMLITHSVEEAIYLASRIVVVTARPARIRQIIDVPFAYPRDESIQERPEFGEL 243 L E K+VMLITHSVEEA++LASRIVVVTARPAR++ I++VPFAYPR E ++ER EF EL Sbjct: 189 LAAERKSVMLITHSVEEAVFLASRIVVVTARPARVKDIVEVPFAYPRTEQLRERREFAEL 248 Query: 244 RSHIKHLVMDEYRAQQA 260 R+ + LVMDEY A A Sbjct: 249 RARVGRLVMDEYTATTA 265 >ref|NP_883687.1| ATP-binding component of ABC transporter [Bordetella parapertussis 12822] emb|CAE36689.1| ATP-binding component of ABC transporter [Bordetella parapertussis] Length = 273 Score = 398 bits (1023), Expect = e-109, Method: Compositional matrix adjust. Identities = 188/259 (72%), Positives = 217/259 (83%) Query: 3 TRARFDKVSLAFETPKGRLNVVEDVSYDINDGDFIAVIGPSGCGKTTMMSMLAGFQKPTT 62 R RF+ V + + T G + V++ ++Y+I G+F++VIGPSGCGKTTMM ++ GF +PT Sbjct: 9 VRIRFEDVCVDYPTADGPMRVLDGINYEIRQGEFVSVIGPSGCGKTTMMGLVGGFVQPTA 68 Query: 63 GTVLFDGQPVAGPGPERGVIFQEYGVFPWLTVKQNIAFGLTLRANHVAAGERDSICDHYL 122 G VL DGQPV GPGP+RGVIFQEYGVFPWLTV++NIAFGL LR+N VAAGER IC Y+ Sbjct: 69 GRVLLDGQPVGGPGPDRGVIFQEYGVFPWLTVRENIAFGLNLRSNRVAAGERAQICQRYM 128 Query: 123 GLMGLSDFANSYPKHLSGGMRQRLAIARAYAVKPQFLLMDEPFGALDAQTRSNMQNLLLK 182 LMGLSDFA+ YPKHLSGGMRQRLA+ARAYAVKPQFLLMDEPFGALDAQTRS MQ+LLL+ Sbjct: 129 TLMGLSDFAHHYPKHLSGGMRQRLALARAYAVKPQFLLMDEPFGALDAQTRSAMQDLLLQ 188 Query: 183 VLQTEGKTVMLITHSVEEAIYLASRIVVVTARPARIRQIIDVPFAYPRDESIQERPEFGE 242 V TEGKTVMLITHSVEEAIYL+SRIVVVTARPARIR IIDVPF YPR E++ E P FGE Sbjct: 189 VQMTEGKTVMLITHSVEEAIYLSSRIVVVTARPARIRTIIDVPFGYPRAENLHEDPRFGE 248 Query: 243 LRSHIKHLVMDEYRAQQAQ 261 LRSHI+ LVM+EY Q Q Sbjct: 249 LRSHIRALVMEEYAKQARQ 267 >ref|NP_888996.1| taurine ABC transporter ATP-binding protein [Bordetella bronchiseptica RB50] emb|CAE32950.1| ATP-binding component of ABC transporter [Bordetella bronchiseptica RB50] Length = 273 Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust. Identities = 187/259 (72%), Positives = 216/259 (83%) Query: 3 TRARFDKVSLAFETPKGRLNVVEDVSYDINDGDFIAVIGPSGCGKTTMMSMLAGFQKPTT 62 R RF+ V + + T G + V++ ++Y+I G+F++VIGPSGCGKTTMM ++ GF +PT Sbjct: 9 VRIRFEDVCVDYPTADGPMRVLDGINYEIRQGEFVSVIGPSGCGKTTMMGLVGGFVQPTA 68 Query: 63 GTVLFDGQPVAGPGPERGVIFQEYGVFPWLTVKQNIAFGLTLRANHVAAGERDSICDHYL 122 G VL DGQPV GPGP+RGVIFQEYGVFPWLTV++NIAFGL LR+N VAAGER IC Y+ Sbjct: 69 GRVLLDGQPVGGPGPDRGVIFQEYGVFPWLTVRENIAFGLNLRSNRVAAGERAQICQRYM 128 Query: 123 GLMGLSDFANSYPKHLSGGMRQRLAIARAYAVKPQFLLMDEPFGALDAQTRSNMQNLLLK 182 LMGL DFA+ YPKHLSGGMRQRLA+ARAYAVKPQFLLMDEPFGALDAQTRS MQ+LLL+ Sbjct: 129 TLMGLGDFAHHYPKHLSGGMRQRLALARAYAVKPQFLLMDEPFGALDAQTRSAMQDLLLQ 188 Query: 183 VLQTEGKTVMLITHSVEEAIYLASRIVVVTARPARIRQIIDVPFAYPRDESIQERPEFGE 242 V TEGKTVMLITHSVEEAIYL+SRIVVVTARPARIR IIDVPF YPR E++ E P FGE Sbjct: 189 VQMTEGKTVMLITHSVEEAIYLSSRIVVVTARPARIRTIIDVPFGYPRAENLHEDPRFGE 248 Query: 243 LRSHIKHLVMDEYRAQQAQ 261 LRSHI+ LVM+EY Q Q Sbjct: 249 LRSHIRALVMEEYAKQARQ 267 >ref|YP_001631516.1| putative ABC-transport protein, ATP-binding component [Bordetella petrii DSM 12804] emb|CAP43248.1| putative ABC-transport protein, ATP-binding component [Bordetella petrii] Length = 271 Score = 392 bits (1006), Expect = e-107, Method: Compositional matrix adjust. Identities = 183/261 (70%), Positives = 219/261 (83%) Query: 2 TTRARFDKVSLAFETPKGRLNVVEDVSYDINDGDFIAVIGPSGCGKTTMMSMLAGFQKPT 61 + R +F V++ + T G + V++ + Y+I G+F++VIGPSGCGKTTMM+++AGF +PT Sbjct: 6 SARIQFCNVAVDYPTADGPMRVLDGIDYEIRQGEFVSVIGPSGCGKTTMMNIVAGFVQPT 65 Query: 62 TGTVLFDGQPVAGPGPERGVIFQEYGVFPWLTVKQNIAFGLTLRANHVAAGERDSICDHY 121 G VL DG+P+AGPGP+RGVIFQEYGVFPWLTVK+NIAFGLTLRAN + ERD IC Y Sbjct: 66 EGQVLLDGRPIAGPGPDRGVIFQEYGVFPWLTVKENIAFGLTLRANQTSRAERDEICQRY 125 Query: 122 LGLMGLSDFANSYPKHLSGGMRQRLAIARAYAVKPQFLLMDEPFGALDAQTRSNMQNLLL 181 + LMGL+DFAN +PKHLSGGMRQRLA+ARAYAVKPQFLLMDEPFGALDAQTRS MQ+LLL Sbjct: 126 MELMGLADFANHHPKHLSGGMRQRLALARAYAVKPQFLLMDEPFGALDAQTRSAMQDLLL 185 Query: 182 KVLQTEGKTVMLITHSVEEAIYLASRIVVVTARPARIRQIIDVPFAYPRDESIQERPEFG 241 +VL E KTVMLITHSVEEAIYL+SRIVVVTARPARIR +IDVPF YPR E++ E P FG Sbjct: 186 QVLLAEDKTVMLITHSVEEAIYLSSRIVVVTARPARIRTVIDVPFGYPRAENLHEDPRFG 245 Query: 242 ELRSHIKHLVMDEYRAQQAQM 262 ELRS I+ LVM+EY Q +Q+ Sbjct: 246 ELRSQIRSLVMEEYARQASQV 266