BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0048.0001.p (277 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001208663.1| putative glucose-methanol-choline (GMC) oxid... 399 e-109 ref|YP_487666.1| glucose-methanol-choline oxidoreductase [Rhodop... 393 e-107 ref|ZP_02191362.1| Glucose-methanol-choline oxidoreductase [alph... 338 5e-91 ref|YP_001631518.1| putative GMC oxidoreductase [Bordetella petr... 334 7e-90 ref|NP_888994.1| alcohol dehydrogenase [acceptor] [Bordetella br... 333 1e-89 >ref|YP_001208663.1| putative glucose-methanol-choline (GMC) oxidoreductase choline dehydrogenase (CHD) [Bradyrhizobium sp. ORS 278] emb|CAL80448.1| Putative glucose-methanol-choline (GMC) oxidoreductase; putative choline dehydrogenase (CHD) [Bradyrhizobium sp. ORS 278] Length = 533 Score = 399 bits (1024), Expect = e-109, Method: Compositional matrix adjust. Identities = 190/259 (73%), Positives = 215/259 (83%) Query: 1 MSGLGYDYIIVGAGSAGCVVANRLSADPACRVLLLEAGGSDRNFWLKLPVGYYRTIYNER 60 M+ GYDYIIVGAGSAGCV+ANRLSADPACRVLLLEAGGSDRNFWL++P+GYYR IY++R Sbjct: 1 MAARGYDYIIVGAGSAGCVLANRLSADPACRVLLLEAGGSDRNFWLRIPIGYYRAIYDKR 60 Query: 61 FSRLFRTEPSEGSGGRAIVWPRGRVLGGSSSINGLIFIRGQHEDFDDWERLGAAGWSYRD 120 FSRLF TEPSE + GRAIVWPRGRVLGGSSSINGLIFIRG+ FDDWER GA GWSY Sbjct: 61 FSRLFDTEPSELTAGRAIVWPRGRVLGGSSSINGLIFIRGEPAGFDDWERAGARGWSYNH 120 Query: 121 VLPYFRRYERYRGGESQFHGGLGEFEVSDLRNDNPASRAWVDAGVQFGLPRNPDFNGATT 180 +LP+FRRYERY GG+SQ+HGGLGEF VS+LR NPAS+AWVDA +FGLPRNPDFNG TT Sbjct: 121 LLPFFRRYERYEGGDSQYHGGLGEFSVSELRTGNPASQAWVDAAAEFGLPRNPDFNGPTT 180 Query: 181 LGVGSYQLGIGRHWRTSSASAFLRPIADRRNLTVITHAQVSKVTFNGRVATGVEWISKGQ 240 LG GSYQLGIGRHWR+S+A+AFL PI +R NLTV+T QVS+V G A+GVEWI G Sbjct: 181 LGAGSYQLGIGRHWRSSAATAFLHPIMNRANLTVVTGVQVSRVILRGSSASGVEWIKDGT 240 Query: 241 VHRATADREXCFASTVFPS 259 + A ADRE A+ S Sbjct: 241 ITSAMADREVLLAAGALQS 259 >ref|YP_487666.1| glucose-methanol-choline oxidoreductase [Rhodopseudomonas palustris HaA2] gb|ABD08755.1| Glucose-methanol-choline oxidoreductase [Rhodopseudomonas palustris HaA2] Length = 531 Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust. Identities = 190/259 (73%), Positives = 217/259 (83%) Query: 1 MSGLGYDYIIVGAGSAGCVVANRLSADPACRVLLLEAGGSDRNFWLKLPVGYYRTIYNER 60 M+ G+DYIIVGAGSAGC+VANRLSADPACRVLLLEAGGSDRN WLKLPVGYYR+IY++R Sbjct: 1 MAAQGWDYIIVGAGSAGCIVANRLSADPACRVLLLEAGGSDRNIWLKLPVGYYRSIYDDR 60 Query: 61 FSRLFRTEPSEGSGGRAIVWPRGRVLGGSSSINGLIFIRGQHEDFDDWERLGAAGWSYRD 120 FSR F TEPS+ +GGRAIVWPRGRVLGGSSSINGLIFIRG+ FDDWERLGA GWSY++ Sbjct: 61 FSRKFITEPSDVTGGRAIVWPRGRVLGGSSSINGLIFIRGEPAGFDDWERLGAKGWSYQE 120 Query: 121 VLPYFRRYERYRGGESQFHGGLGEFEVSDLRNDNPASRAWVDAGVQFGLPRNPDFNGATT 180 +LPYFRRYERYRGG+SQ+HGG GEFEVSDLR + A+ AWV AG++FGLPRNPDFN TT Sbjct: 121 LLPYFRRYERYRGGDSQYHGGFGEFEVSDLRTGSEAAAAWVQAGIEFGLPRNPDFNAETT 180 Query: 181 LGVGSYQLGIGRHWRTSSASAFLRPIADRRNLTVITHAQVSKVTFNGRVATGVEWISKGQ 240 GVG+YQLGIGR WR+SSASAFL P+ R NLTVIT A S+V F+G ATGVEWI GQ Sbjct: 181 YGVGAYQLGIGRRWRSSSASAFLHPVMHRTNLTVITRAHASRVLFDGTTATGVEWIRDGQ 240 Query: 241 VHRATADREXCFASTVFPS 259 +A A+RE ++ S Sbjct: 241 RIQARAEREVILSAGALQS 259 >ref|ZP_02191362.1| Glucose-methanol-choline oxidoreductase [alpha proteobacterium BAL199] gb|EDP61886.1| Glucose-methanol-choline oxidoreductase [alpha proteobacterium BAL199] Length = 563 Score = 338 bits (867), Expect = 5e-91, Method: Compositional matrix adjust. Identities = 167/259 (64%), Positives = 194/259 (74%) Query: 1 MSGLGYDYIIVGAGSAGCVVANRLSADPACRVLLLEAGGSDRNFWLKLPVGYYRTIYNER 60 MS L +DYIIVGAGSAGCV+ANRLSADP RVLLLEAGG DR+ WL+LP+GY+R+I++ER Sbjct: 1 MSTLEFDYIIVGAGSAGCVLANRLSADPGLRVLLLEAGGWDRHVWLRLPIGYFRSIFDER 60 Query: 61 FSRLFRTEPSEGSGGRAIVWPRGRVLGGSSSINGLIFIRGQHEDFDDWERLGAAGWSYRD 120 F+R FRTEP G+ GRAIVWPRGRV+GGSS+INGLIFIRGQHEDFDDW+RLGA GW YR Sbjct: 61 FARQFRTEPGPGTAGRAIVWPRGRVVGGSSTINGLIFIRGQHEDFDDWQRLGADGWDYRS 120 Query: 121 VLPYFRRYERYRGGESQFHGGLGEFEVSDLRNDNPASRAWVDAGVQFGLPRNPDFNGATT 180 VLP+FR +ER G SQ+ G GE VSDLRND+P+ AW+ A Q GL NPDFNG TT Sbjct: 121 VLPHFRAFERDGGAPSQYRGSYGELRVSDLRNDDPSCGAWLQAAQQSGLAANPDFNGETT 180 Query: 181 LGVGSYQLGIGRHWRTSSASAFLRPIADRRNLTVITHAQVSKVTFNGRVATGVEWISKGQ 240 GVG+YQL IG WR S+A AFL P+ R NLTV T A ++V F GR ATGVEW + G+ Sbjct: 181 HGVGAYQLSIGSRWRESTARAFLHPVLGRPNLTVTTRAHATRVLFEGRRATGVEWAAGGR 240 Query: 241 VHRATADREXCFASTVFPS 259 A RE A S Sbjct: 241 RQSGRAVREVILAGGALQS 259 >ref|YP_001631518.1| putative GMC oxidoreductase [Bordetella petrii DSM 12804] emb|CAP43250.1| putative GMC oxidoreductase [Bordetella petrii] Length = 536 Score = 334 bits (857), Expect = 7e-90, Method: Compositional matrix adjust. Identities = 165/254 (64%), Positives = 189/254 (74%) Query: 6 YDYIIVGAGSAGCVVANRLSADPACRVLLLEAGGSDRNFWLKLPVGYYRTIYNERFSRLF 65 YDYIIVGAGSAGCV+ANRLSADPACRVLLLEAGG+DR FWLKLPVGY+R+IY+ R+S F Sbjct: 5 YDYIIVGAGSAGCVLANRLSADPACRVLLLEAGGADRGFWLKLPVGYFRSIYDPRYSWQF 64 Query: 66 RTEPSEGSGGRAIVWPRGRVLGGSSSINGLIFIRGQHEDFDDWERLGAAGWSYRDVLPYF 125 EP +G RAIVWPRGRVLGGSSSINGLI+IRGQH D+DDW RLGAAGW YRDVLP F Sbjct: 65 AVEPQAETGHRAIVWPRGRVLGGSSSINGLIYIRGQHADYDDWARLGAAGWGYRDVLPLF 124 Query: 126 RRYERYRGGESQFHGGLGEFEVSDLRNDNPASRAWVDAGVQFGLPRNPDFNGATTLGVGS 185 RR E Y GG S++HG GE VSDLRND+P AW+ AG Q GLP +PDFNGA G+GS Sbjct: 125 RRSECYAGGASEYHGDSGELHVSDLRNDHPLCDAWLQAGAQAGLPASPDFNGAIDSGLGS 184 Query: 186 YQLGIGRHWRTSSASAFLRPIADRRNLTVITHAQVSKVTFNGRVATGVEWISKGQVHRAT 245 YQL + HWR S+A+AFL P+ R NLTV T A V+++ V GV W+ GQ RA Sbjct: 185 YQLTLRGHWRDSAATAFLHPVRGRPNLTVTTAAHVTRLLIERGVCRGVAWLQDGQQMRAH 244 Query: 246 ADREXCFASTVFPS 259 A E A+ S Sbjct: 245 AAGEVILAAGALQS 258 >ref|NP_888994.1| alcohol dehydrogenase [acceptor] [Bordetella bronchiseptica RB50] emb|CAE32948.1| alcohol dehydrogenase [acceptor] [Bordetella bronchiseptica RB50] Length = 545 Score = 333 bits (855), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 163/257 (63%), Positives = 193/257 (75%), Gaps = 3/257 (1%) Query: 6 YDYIIVGAGSAGCVVANRLSADPACRVLLLEAGGSDRNFWLKLPVGYYRTIYNERFSRLF 65 YDYIIVGAGSAGCV+ANRL+ADPACRVLLLEAGG DRNFWL+LPVGY+R+IY+ RFS F Sbjct: 9 YDYIIVGAGSAGCVLANRLTADPACRVLLLEAGGEDRNFWLRLPVGYFRSIYDPRFSWQF 68 Query: 66 RTEPSEGSGGRAIVWPRGRVLGGSSSINGLIFIRGQHEDFDDWERLGAAGWSYRDVLPYF 125 EP +G R IVWPRGRVLGGSSSINGLI+IRGQH D+DDW R GA GW YRDVLPYF Sbjct: 69 PVEPQAETGERPIVWPRGRVLGGSSSINGLIYIRGQHADYDDWARAGAQGWGYRDVLPYF 128 Query: 126 RRYERYRGGESQFHGGLGEFEVSDLRNDNPASRAWVDAGVQFGLPRNPDFNGATTLGVGS 185 R+ ERY GG S++HGG GE VSDLRND+P R WV+AG+Q G NPDFNGA G+G+ Sbjct: 129 RKSERYSGGASEYHGGAGELCVSDLRNDHPLCRDWVEAGLQAGFDPNPDFNGARDSGLGN 188 Query: 186 YQLGIGRHWRTSSASAFLRPIADRRNLTVITHAQVSKVTFNGRVATGVEWIS---KGQVH 242 YQL + WR S+A+AFL P+ R NLTV+T +V+++ +G V GVEW+ +GQ Sbjct: 189 YQLTLKGRWRCSAATAFLHPVRGRPNLTVLTGVRVTRLLIDGGVCRGVEWVDERRRGQPV 248 Query: 243 RATADREXCFASTVFPS 259 R AD E A+ S Sbjct: 249 RTQADAEVLLAAGALQS 265