BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0047.0020.p (296 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_767443.1| virulence factor [Bradyrhizobium japonicum USDA... 344 8e-93 ref|ZP_07026585.1| integral membrane protein MviN [Afipia sp. 1N... 335 5e-90 ref|ZP_08628081.1| putative peptidoglycan lipid II flippase [Bra... 322 4e-86 ref|ZP_01045182.1| virulence factor MVIN-like [Nitrobacter sp. N... 321 9e-86 ref|YP_575373.1| integral membrane protein MviN [Nitrobacter ham... 308 6e-82 >ref|NP_767443.1| virulence factor [Bradyrhizobium japonicum USDA 110] dbj|BAC46068.1| bll0803 [Bradyrhizobium japonicum USDA 110] Length = 510 Score = 344 bits (883), Expect = 8e-93, Method: Compositional matrix adjust. Identities = 207/295 (70%), Positives = 239/295 (81%), Gaps = 3/295 (1%) Query: 2 SFDPDMRGFLGRAIPGMVASSAPQWLMVAGAVIASTSPSAVSWLYFANRLLELPLGIVGV 61 SFD +MRGF +AIPGM+ASS PQWLMVAGA+IAS +PSAVSWLYFANRL+ELPLGIVGV Sbjct: 219 SFDKEMRGFFAKAIPGMIASSGPQWLMVAGAIIASATPSAVSWLYFANRLIELPLGIVGV 278 Query: 62 AMGTVLIPEMTHAVRSGESSAIAHAESRALELAVGLALPATLGLMVLSEPIVRMLFEHGA 121 AMGTVL+PE+T AV G+ A+AHAESRALELA GLALPATLGL+VL+EPIVR+LF+HGA Sbjct: 279 AMGTVLVPELTRAVTGGDRDAVAHAESRALELATGLALPATLGLIVLAEPIVRLLFQHGA 338 Query: 122 FTAQDSAATAQALIWLTLALPAHVLVKALSPAFFAREDTLTPLLATLKAIVVTIAAAFLF 181 F A DS ATA+AL+WL L LPAHVL+KALSPAF+AR DT+TPLLAT K VV +A A L Sbjct: 339 FGADDSTATARALMWLALGLPAHVLIKALSPAFYARSDTMTPLLATAKGFVVAVALAVLL 398 Query: 182 GHIFGASGIAAGIALGAWSNALALIRKGAATFGFSIDADARRRLPRILAAALAMGALLWL 241 GH FGASGIAA IA GAWS+AL+L+RKG FGFS+D AR+RLPRI+ AA AMGALLWL Sbjct: 399 GHFFGASGIAASIAAGAWSSALSLLRKGTGEFGFSVDTAARKRLPRIVLAASAMGALLWL 458 Query: 242 AEGALPSAGSHGFVQAASLLVLIASGIAGYGLFLQLFGVTGWREAVNAVRQRRPA 296 G +P +HG +Q L V IA+GIA YGL LQ+ G WREA A+ RRPA Sbjct: 459 TAGLVPPE-AHGVIQFIVLGVQIAAGIAVYGLLLQILGAASWREAAAAL--RRPA 510 >ref|ZP_07026585.1| integral membrane protein MviN [Afipia sp. 1NLS2] gb|EFI53727.1| integral membrane protein MviN [Afipia sp. 1NLS2] Length = 519 Score = 335 bits (859), Expect = 5e-90, Method: Compositional matrix adjust. Identities = 178/295 (60%), Positives = 223/295 (75%), Gaps = 2/295 (0%) Query: 1 VSFDPDMRGFLGRAIPGMVASSAPQWLMVAGAVIASTSPSAVSWLYFANRLLELPLGIVG 60 VSF+P +R F +A+PGM+A+S PQ+L+VAGA+IAS+SP+AVSWLYFANRL+ELPLG+VG Sbjct: 220 VSFNPQIRAFYRKAVPGMIANSGPQFLIVAGAIIASSSPAAVSWLYFANRLIELPLGMVG 279 Query: 61 VAMGTVLIPEMTHAVRSGESSAIAHAESRALELAVGLALPATLGLMVLSEPIVRMLFEHG 120 VAMGTVL+PE THA+++ + SA+ HA+SR LELAVGL LPATLGL++LSEPI+ +LF+HG Sbjct: 280 VAMGTVLMPEFTHAIQNNDRSALTHAQSRGLELAVGLVLPATLGLILLSEPIIGILFQHG 339 Query: 121 AFTAQDSAATAQALIWLTLALPAHVLVKALSPAFFAREDTLTPLLATLKAIVVTIAAAFL 180 AFTA D+ ATAQAL L L LPA+VLVK L+PAFFAREDT TPLLATL I + A L Sbjct: 340 AFTAADTVATAQALSVLALGLPAYVLVKVLAPAFFAREDTRTPLLATLAGISSAVIAGLL 399 Query: 181 FGHIFGASGIAAGIALGAWSNALALIRKGAATFGFSIDADARRRLPRILAAALAMGALLW 240 H FG SGIAA I+LGAW AL L +GA++FGFSID DARRRLPRI A MG L+ Sbjct: 400 VDHRFGVSGIAASISLGAWVCALILTWRGASSFGFSIDDDARRRLPRIALCAAVMGLTLF 459 Query: 241 LAEGAL-PSAGSHGFVQAASLL-VLIASGIAGYGLFLQLFGVTGWREAVNAVRQR 293 ++ + P + F ++L ++A+GI+ YGL L LF V W EA +R R Sbjct: 460 TSQYFVAPLTENAPFFPRLTILGGMVAAGISFYGLLLDLFDVVSWGEAFGDLRDR 514 >ref|ZP_08628081.1| putative peptidoglycan lipid II flippase [Bradyrhizobiaceae bacterium SG-6C] gb|EGP08990.1| putative peptidoglycan lipid II flippase [Bradyrhizobiaceae bacterium SG-6C] Length = 518 Score = 322 bits (825), Expect = 4e-86, Method: Compositional matrix adjust. Identities = 180/296 (60%), Positives = 225/296 (76%), Gaps = 2/296 (0%) Query: 1 VSFDPDMRGFLGRAIPGMVASSAPQWLMVAGAVIASTSPSAVSWLYFANRLLELPLGIVG 60 VSFDP +RGFL + IPGMVA++ PQ+L+V GA+IAS+SP+AVSWLYFANRL+ELPLG+VG Sbjct: 220 VSFDPQIRGFLRKGIPGMVANAGPQFLIVGGAIIASSSPAAVSWLYFANRLIELPLGMVG 279 Query: 61 VAMGTVLIPEMTHAVRSGESSAIAHAESRALELAVGLALPATLGLMVLSEPIVRMLFEHG 120 VAMGTVL+PE+T A+RS + A+ AESR ELA L LPA LGL++LSEPI+R+LFEHG Sbjct: 280 VAMGTVLVPELTRAIRSNDHDALMQAESRGAELATALVLPAALGLILLSEPIIRVLFEHG 339 Query: 121 AFTAQDSAATAQALIWLTLALPAHVLVKALSPAFFAREDTLTPLLATLKAIVVTIAAAFL 180 AFTA D+ ATA+AL L L LPAHVLVK L+PAFFAREDT TPL+AT+ + V + L Sbjct: 340 AFTAADTTATARALSILALGLPAHVLVKVLAPAFFAREDTKTPLVATISGVAVAVICGLL 399 Query: 181 FGHIFGASGIAAGIALGAWSNALALIRKGAATFGFSIDADARRRLPRILAAALAMGALLW 240 FG +GASG+AA I+LGAW A L +G+ TFGFSIDA A RRLPRI A MGA+L+ Sbjct: 400 FGRPYGASGVAASISLGAWFCAAILTWRGSTTFGFSIDATALRRLPRIALCAAIMGAMLF 459 Query: 241 LAEGAL-PSAGSHGFVQAASLL-VLIASGIAGYGLFLQLFGVTGWREAVNAVRQRR 294 LAE + P A + GF ++L L+A+G++ YGL L LFGV W EA++ +R R Sbjct: 460 LAESFVAPVAATAGFAAQITILGGLVAAGVSFYGLLLDLFGVLNWGEAISNLRDGR 515 >ref|ZP_01045182.1| virulence factor MVIN-like [Nitrobacter sp. Nb-311A] gb|EAQ37187.1| virulence factor MVIN-like [Nitrobacter sp. Nb-311A] Length = 519 Score = 321 bits (822), Expect = 9e-86, Method: Compositional matrix adjust. Identities = 180/295 (61%), Positives = 228/295 (77%), Gaps = 1/295 (0%) Query: 1 VSFDPDMRGFLGRAIPGMVASSAPQWLMVAGAVIASTSPSAVSWLYFANRLLELPLGIVG 60 +SF MR F G+A+PGMVA+S PQ L+VAGA++ASTSPSAVSWLYFANRL+ELPLG+VG Sbjct: 219 ISFASGMRDFAGKAVPGMVANSGPQLLIVAGAILASTSPSAVSWLYFANRLIELPLGMVG 278 Query: 61 VAMGTVLIPEMTHAVRSGESSAIAHAESRALELAVGLALPATLGLMVLSEPIVRMLFEHG 120 VA+GTVL+PE+T A+ G+ +A+ +AESR +ELA LALPA +GL+VLSEPIVR+LFEHG Sbjct: 279 VAIGTVLVPEITRALTKGDRAAMVNAESRGIELAAALALPAAIGLIVLSEPIVRVLFEHG 338 Query: 121 AFTAQDSAATAQALIWLTLALPAHVLVKALSPAFFAREDTLTPLLATLKAIVVTIAAAFL 180 AFTA D+ ATA L L LPA+V++KALSPAFFAR +T+TPL+ATLK I V + A + Sbjct: 339 AFTAADTRATALTLGCLGFGLPAYVVIKALSPAFFARGNTMTPLMATLKGIAVAMVLALV 398 Query: 181 FGHIFGASGIAAGIALGAWSNALALIRKGAATFGFSIDADARRRLPRILAAALAMGALLW 240 FG +GIA +ALGAWS+A++LIR AATFGFSIDA+ARRRLPRI AA MG +LW Sbjct: 399 LERPFGVAGIAVAVALGAWSSAVSLIRSIAATFGFSIDAEARRRLPRIGLAAFVMGGVLW 458 Query: 241 LA-EGALPSAGSHGFVQAASLLVLIASGIAGYGLFLQLFGVTGWREAVNAVRQRR 294 LA A P +G++G +QAA+L VLIA+G+A YGL L + V + A+ + R Sbjct: 459 LAVRLAGPVSGANGLLQAATLAVLIAAGVAIYGLLLWMLRVIDRNDIQGALIRSR 513 >ref|YP_575373.1| integral membrane protein MviN [Nitrobacter hamburgensis X14] gb|ABE60913.1| integral membrane protein MviN [Nitrobacter hamburgensis X14] Length = 529 Score = 308 bits (790), Expect = 6e-82, Method: Compositional matrix adjust. Identities = 187/295 (63%), Positives = 225/295 (76%), Gaps = 1/295 (0%) Query: 1 VSFDPDMRGFLGRAIPGMVASSAPQWLMVAGAVIASTSPSAVSWLYFANRLLELPLGIVG 60 +SFD MR F +A+PGM+A+S PQ L+VAGA++AS SPSAV+WLYFANRL+ELPLG+VG Sbjct: 229 LSFDTGMRDFARKAVPGMIANSGPQLLIVAGAIVASVSPSAVAWLYFANRLIELPLGMVG 288 Query: 61 VAMGTVLIPEMTHAVRSGESSAIAHAESRALELAVGLALPATLGLMVLSEPIVRMLFEHG 120 VA+GTVL+PEM+ A+ G+ A+ HAESR +ELA LALPAT GL+VLSEPIVR+LFEHG Sbjct: 289 VAIGTVLVPEMSRALNKGDRLALVHAESRGIELAAALALPATFGLIVLSEPIVRVLFEHG 348 Query: 121 AFTAQDSAATAQALIWLTLALPAHVLVKALSPAFFAREDTLTPLLATLKAIVVTIAAAFL 180 AFTA D+ ATA AL L L LPA+VL+KALSPAFFAR +T+TPLLA L I V I A + Sbjct: 349 AFTAADTQATALALGCLGLGLPAYVLIKALSPAFFARGNTMTPLLAALTGIAVAIVLALV 408 Query: 181 FGHIFGASGIAAGIALGAWSNALALIRKGAATFGFSIDADARRRLPRILAAALAMGALLW 240 FG +FG GIA +A+GAWSNA +L R AATFGFSIDA+ARRRLPRI+ AAL MG LLW Sbjct: 409 FGRLFGIGGIAVAVAVGAWSNAASLARSVAATFGFSIDAEARRRLPRIVLAALLMGGLLW 468 Query: 241 LAEGALPSA-GSHGFVQAASLLVLIASGIAGYGLFLQLFGVTGWREAVNAVRQRR 294 LA LP +H +QAA L+VLI +GIA YGL L F V W + A+ Q R Sbjct: 469 LAVRLLPPMPDAHELLQAAMLVVLIVAGIAVYGLLLLAFRVIVWSDMQAALAQSR 523