BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0047.0019.p (350 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001236247.1| tryptophanyl-tRNA synthetase [Bradyrhizobium... 650 0.0 emb|CAL74005.1| Tryptophanyl-tRNA synthetase (Tryptophan--tRNA l... 649 0.0 ref|NP_767442.1| tryptophanyl-tRNA synthetase [Bradyrhizobium ja... 649 0.0 ref|YP_001202255.2| tryptophanyl-tRNA synthetase [Bradyrhizobium... 649 0.0 ref|YP_575374.1| tryptophanyl-tRNA synthetase [Nitrobacter hambu... 593 e-167 >ref|YP_001236247.1| tryptophanyl-tRNA synthetase [Bradyrhizobium sp. BTAi1] gb|ABQ32341.1| tryptophanyl-tRNA synthetase [Bradyrhizobium sp. BTAi1] Length = 350 Score = 650 bits (1678), Expect = 0.0, Method: Compositional matrix adjust. Identities = 309/348 (88%), Positives = 323/348 (92%) Query: 1 MAFVERVFSGVQPTGNLHLGNYLGAIVNFVKMQQTHNCIYCVVDMHAITQGVEVWGGPAE 60 MAFVERVFSGVQPTGNLHLGNYLGAIVNFVKMQ+THNCIYCVVDMHAIT V+VWGGPAE Sbjct: 1 MAFVERVFSGVQPTGNLHLGNYLGAIVNFVKMQETHNCIYCVVDMHAITMPVDVWGGPAE 60 Query: 61 LARNTREVTAAFIAAGIDAKKHIVFNQSQIAGHAELTWIFNCVARIGWLNRMTQFKEKAG 120 LARNTREVTAAFIAAGID KKHIVFNQSQ++GHAEL WIFNCVARIGWLNRMTQFKEKAG Sbjct: 61 LARNTREVTAAFIAAGIDPKKHIVFNQSQVSGHAELAWIFNCVARIGWLNRMTQFKEKAG 120 Query: 121 KDRENASVGLYDYPVLMAADILLYRATHVPVGEDQKQHLELSRDIAQKFNNDFGDSIRGH 180 KDRENASVGLYDYPVLMAADILLYRATHVPVGEDQKQHLELSRDIAQKFNNDFGDSIR H Sbjct: 121 KDRENASVGLYDYPVLMAADILLYRATHVPVGEDQKQHLELSRDIAQKFNNDFGDSIRSH 180 Query: 181 GFADGLFFPQPEPLITGPATRVMSLRDGTKKMSKSDASDNSRINLTDDADTIAQKIRKAK 240 GF DGLFFP PEP ITGPATRVMSLRDGTKKMSKSDASD SRINLTDDADTIAQK+RKAK Sbjct: 181 GFGDGLFFPLPEPFITGPATRVMSLRDGTKKMSKSDASDYSRINLTDDADTIAQKVRKAK 240 Query: 241 TDPEPLPSEEKGLETRPEADNLVGIYAALAGISKQEVLTQFGGGQFSSFKNALVEVCVAK 300 TDPEPLP+EEKGLE RPEADNLVGIYAAL+ SK EVL FGGGQFSSFKNALVE+CV K Sbjct: 241 TDPEPLPTEEKGLEARPEADNLVGIYAALSDRSKAEVLRDFGGGQFSSFKNALVELCVTK 300 Query: 301 LAPIASEMKKLVADPGHVDAVLADGANRARGIADETMRVTKDIVGFIR 348 L PIA+EMK+L ADPG+VD+VL DG RA+ IA ETM+ KDIVGFIR Sbjct: 301 LGPIAAEMKRLTADPGYVDSVLIDGGERAQAIAAETMKAAKDIVGFIR 348 >emb|CAL74005.1| Tryptophanyl-tRNA synthetase (Tryptophan--tRNA ligase) (TrpRS) [Bradyrhizobium sp. ORS 278] Length = 364 Score = 649 bits (1675), Expect = 0.0, Method: Compositional matrix adjust. Identities = 307/348 (88%), Positives = 324/348 (93%) Query: 1 MAFVERVFSGVQPTGNLHLGNYLGAIVNFVKMQQTHNCIYCVVDMHAITQGVEVWGGPAE 60 MAFVERVFSGVQPTGNLHLGNYLGAIVNFVKMQ+THNCIYCVVDMHAIT ++VWGGPAE Sbjct: 15 MAFVERVFSGVQPTGNLHLGNYLGAIVNFVKMQETHNCIYCVVDMHAITMPIDVWGGPAE 74 Query: 61 LARNTREVTAAFIAAGIDAKKHIVFNQSQIAGHAELTWIFNCVARIGWLNRMTQFKEKAG 120 LARNTREVTAAFIAAGID KKHIVFNQSQ++GHAEL WIFNCVARIGWLNRMTQFKEKAG Sbjct: 75 LARNTREVTAAFIAAGIDPKKHIVFNQSQVSGHAELAWIFNCVARIGWLNRMTQFKEKAG 134 Query: 121 KDRENASVGLYDYPVLMAADILLYRATHVPVGEDQKQHLELSRDIAQKFNNDFGDSIRGH 180 KDRENASVGLYDYPVLMAADILLYRATHVPVGEDQKQHLELSRDIAQKFNNDFGDSIR Sbjct: 135 KDRENASVGLYDYPVLMAADILLYRATHVPVGEDQKQHLELSRDIAQKFNNDFGDSIRAQ 194 Query: 181 GFADGLFFPQPEPLITGPATRVMSLRDGTKKMSKSDASDNSRINLTDDADTIAQKIRKAK 240 GF DGLFFP PEP ITGPATRVMSLRDGTKKMSKSDASD SRINLTDDADTIAQK+RKAK Sbjct: 195 GFGDGLFFPLPEPFITGPATRVMSLRDGTKKMSKSDASDYSRINLTDDADTIAQKVRKAK 254 Query: 241 TDPEPLPSEEKGLETRPEADNLVGIYAALAGISKQEVLTQFGGGQFSSFKNALVEVCVAK 300 TDPEPLPSEEKGL+TRPEADNLVGIYAAL+ SK +VL +FGGGQFSSFKNALVE+CV K Sbjct: 255 TDPEPLPSEEKGLDTRPEADNLVGIYAALSDRSKADVLREFGGGQFSSFKNALVELCVTK 314 Query: 301 LAPIASEMKKLVADPGHVDAVLADGANRARGIADETMRVTKDIVGFIR 348 L PIA+EMK+L ADPG+VD+VL DG RA+ IA ETM+ KDIVGFIR Sbjct: 315 LGPIAAEMKRLTADPGYVDSVLVDGGERAQAIAAETMKTAKDIVGFIR 362 >ref|NP_767442.1| tryptophanyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110] sp|Q89W91.1|SYW_BRAJA RecName: Full=Tryptophanyl-tRNA synthetase; AltName: Full=Tryptophan--tRNA ligase; Short=TrpRS dbj|BAC46067.1| tryptophan-tRNA ligase [Bradyrhizobium japonicum USDA 110] Length = 350 Score = 649 bits (1674), Expect = 0.0, Method: Compositional matrix adjust. Identities = 307/350 (87%), Positives = 327/350 (93%) Query: 1 MAFVERVFSGVQPTGNLHLGNYLGAIVNFVKMQQTHNCIYCVVDMHAITQGVEVWGGPAE 60 M FVERVFSGVQPTGNLHLGNYLGAIVNFVKMQ+THNCIYCVVDMHAITQGV+VWGGP E Sbjct: 1 MPFVERVFSGVQPTGNLHLGNYLGAIVNFVKMQETHNCIYCVVDMHAITQGVDVWGGPVE 60 Query: 61 LARNTREVTAAFIAAGIDAKKHIVFNQSQIAGHAELTWIFNCVARIGWLNRMTQFKEKAG 120 LARNTREVTAAFIA+GID KKHIVFNQSQ++GHAEL WIFNCVAR+GWL RMTQFKEKAG Sbjct: 61 LARNTREVTAAFIASGIDPKKHIVFNQSQVSGHAELAWIFNCVARMGWLGRMTQFKEKAG 120 Query: 121 KDRENASVGLYDYPVLMAADILLYRATHVPVGEDQKQHLELSRDIAQKFNNDFGDSIRGH 180 KDRENASVGL+DYPVLMAADILLYRATHVPVGEDQKQHLELSRDIAQKFNNDFGDSIR Sbjct: 121 KDRENASVGLFDYPVLMAADILLYRATHVPVGEDQKQHLELSRDIAQKFNNDFGDSIRAQ 180 Query: 181 GFADGLFFPQPEPLITGPATRVMSLRDGTKKMSKSDASDNSRINLTDDADTIAQKIRKAK 240 G DGLFFP PEP ITGPATRVMSLRDGTKKMSKSDASDNSRINLTDDADTIAQKIRKAK Sbjct: 181 GTNDGLFFPLPEPFITGPATRVMSLRDGTKKMSKSDASDNSRINLTDDADTIAQKIRKAK 240 Query: 241 TDPEPLPSEEKGLETRPEADNLVGIYAALAGISKQEVLTQFGGGQFSSFKNALVEVCVAK 300 TDPEPLP+EEKGLE RPEADNLVGI+AALA SK +VL FGGGQFSSFKNAL E+CV K Sbjct: 241 TDPEPLPTEEKGLEARPEADNLVGIFAALADRSKADVLRDFGGGQFSSFKNALAELCVTK 300 Query: 301 LAPIASEMKKLVADPGHVDAVLADGANRARGIADETMRVTKDIVGFIRPR 350 LAPIA EMK+LVADPGH+DA+L +G++RAR IADETM+++KDIVGFIR R Sbjct: 301 LAPIAGEMKRLVADPGHIDAILNEGSDRARAIADETMKLSKDIVGFIRRR 350 >ref|YP_001202255.2| tryptophanyl-tRNA synthetase [Bradyrhizobium sp. ORS 278] Length = 350 Score = 649 bits (1673), Expect = 0.0, Method: Compositional matrix adjust. Identities = 307/348 (88%), Positives = 324/348 (93%) Query: 1 MAFVERVFSGVQPTGNLHLGNYLGAIVNFVKMQQTHNCIYCVVDMHAITQGVEVWGGPAE 60 MAFVERVFSGVQPTGNLHLGNYLGAIVNFVKMQ+THNCIYCVVDMHAIT ++VWGGPAE Sbjct: 1 MAFVERVFSGVQPTGNLHLGNYLGAIVNFVKMQETHNCIYCVVDMHAITMPIDVWGGPAE 60 Query: 61 LARNTREVTAAFIAAGIDAKKHIVFNQSQIAGHAELTWIFNCVARIGWLNRMTQFKEKAG 120 LARNTREVTAAFIAAGID KKHIVFNQSQ++GHAEL WIFNCVARIGWLNRMTQFKEKAG Sbjct: 61 LARNTREVTAAFIAAGIDPKKHIVFNQSQVSGHAELAWIFNCVARIGWLNRMTQFKEKAG 120 Query: 121 KDRENASVGLYDYPVLMAADILLYRATHVPVGEDQKQHLELSRDIAQKFNNDFGDSIRGH 180 KDRENASVGLYDYPVLMAADILLYRATHVPVGEDQKQHLELSRDIAQKFNNDFGDSIR Sbjct: 121 KDRENASVGLYDYPVLMAADILLYRATHVPVGEDQKQHLELSRDIAQKFNNDFGDSIRAQ 180 Query: 181 GFADGLFFPQPEPLITGPATRVMSLRDGTKKMSKSDASDNSRINLTDDADTIAQKIRKAK 240 GF DGLFFP PEP ITGPATRVMSLRDGTKKMSKSDASD SRINLTDDADTIAQK+RKAK Sbjct: 181 GFGDGLFFPLPEPFITGPATRVMSLRDGTKKMSKSDASDYSRINLTDDADTIAQKVRKAK 240 Query: 241 TDPEPLPSEEKGLETRPEADNLVGIYAALAGISKQEVLTQFGGGQFSSFKNALVEVCVAK 300 TDPEPLPSEEKGL+TRPEADNLVGIYAAL+ SK +VL +FGGGQFSSFKNALVE+CV K Sbjct: 241 TDPEPLPSEEKGLDTRPEADNLVGIYAALSDRSKADVLREFGGGQFSSFKNALVELCVTK 300 Query: 301 LAPIASEMKKLVADPGHVDAVLADGANRARGIADETMRVTKDIVGFIR 348 L PIA+EMK+L ADPG+VD+VL DG RA+ IA ETM+ KDIVGFIR Sbjct: 301 LGPIAAEMKRLTADPGYVDSVLVDGGERAQAIAAETMKTAKDIVGFIR 348 >ref|YP_575374.1| tryptophanyl-tRNA synthetase [Nitrobacter hamburgensis X14] gb|ABE60914.1| tryptophanyl-tRNA synthetase [Nitrobacter hamburgensis X14] Length = 347 Score = 593 bits (1529), Expect = e-167, Method: Compositional matrix adjust. Identities = 282/345 (81%), Positives = 308/345 (89%), Gaps = 1/345 (0%) Query: 6 RVFSGVQPTGNLHLGNYLGAIVNFVKMQQTHNCIYCVVDMHAITQGVEVWGGPAELARNT 65 RVFSGVQPTGNLHLGNYLGAIVNFVK+Q H C+YCVVD+HAIT V VWGGP EL RNT Sbjct: 4 RVFSGVQPTGNLHLGNYLGAIVNFVKLQADHQCLYCVVDLHAITVPVAVWGGPDELRRNT 63 Query: 66 REVTAAFIAAGIDAKKHIVFNQSQIAGHAELTWIFNCVARIGWLNRMTQFKEKAGKDREN 125 REVTAAFIA+GID K+HI+FNQSQ+AGHAELTW+FNCVAR+GWLNRMTQFKEKAGKDREN Sbjct: 64 REVTAAFIASGIDPKQHIIFNQSQVAGHAELTWVFNCVARLGWLNRMTQFKEKAGKDREN 123 Query: 126 ASVGLYDYPVLMAADILLYRATHVPVGEDQKQHLELSRDIAQKFNNDFGDSIRGHGFADG 185 AS+GLYDYPVLMA+DILLYRATHVPVGEDQKQHLELSRDIAQKFNNDF SI G+G DG Sbjct: 124 ASIGLYDYPVLMASDILLYRATHVPVGEDQKQHLELSRDIAQKFNNDFSASIAGNGHGDG 183 Query: 186 LFFPQPEPLITGPATRVMSLRDGTKKMSKSDASDNSRINLTDDADTIAQKIRKAKTDPEP 245 FFP PEP+ITGPATRVMSLRDGTKKMSKSD SD SRINLTDDADTIAQKIRKAKTDPEP Sbjct: 184 -FFPLPEPVITGPATRVMSLRDGTKKMSKSDPSDYSRINLTDDADTIAQKIRKAKTDPEP 242 Query: 246 LPSEEKGLETRPEADNLVGIYAALAGISKQEVLTQFGGGQFSSFKNALVEVCVAKLAPIA 305 LPSEEKGLE+RPEADNLVGIYAAL+G K EVL QFGG QFS FK+ LV++ VAKL+PIA Sbjct: 243 LPSEEKGLESRPEADNLVGIYAALSGKPKPEVLAQFGGAQFSGFKSNLVDLAVAKLSPIA 302 Query: 306 SEMKKLVADPGHVDAVLADGANRARGIADETMRVTKDIVGFIRPR 350 +EMK+L DP +V+ +L +GA+RAR IA ETM KDIVGFIR R Sbjct: 303 AEMKRLTDDPAYVEGILIEGADRARAIASETMNAVKDIVGFIRKR 347