BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0047.0018.p         (164 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_530354.1| hypothetical protein RPC_0460 [Rhodopseudomonas...   274   4e-72
ref|YP_575377.1| hypothetical protein Nham_0015 [Nitrobacter ham...   272   1e-71
ref|ZP_01045180.1| UspA [Nitrobacter sp. Nb-311A] >gi|85699317|g...   267   5e-70
ref|ZP_08628079.1| universal stress protein UspA-like protein [B...   265   2e-69
ref|YP_316628.1| hypothetical protein Nwi_0008 [Nitrobacter wino...   264   4e-69

>ref|YP_530354.1| hypothetical protein RPC_0460 [Rhodopseudomonas palustris BisB18]
 gb|ABD86035.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB18]
          Length = 164

 Score =  274 bits (700), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 134/164 (81%), Positives = 146/164 (89%)

Query: 1   MTTQRRSYETGHKPKCLVIVDDTAEWDRAVYYASRWAIRVGGGVVMLRVIETEDQNQQWL 60
           M TQRRSYE GH+PKCLVIVD+TAEWDRAVYYASRWA+R+GGGVVMLRVIE  D NQQWL
Sbjct: 1   MRTQRRSYEPGHQPKCLVIVDETAEWDRAVYYASRWAVRIGGGVVMLRVIEILDHNQQWL 60

Query: 61  GVADIMRAEAEEAANEALDRAAGRANGIAAITPERVIREGDPIEQILDVIDKDVDIAALV 120
           GVAD+MRAEA+E A  ALDRA+GRANGIAAITPERVIREGDP+EQI DVI +DVDI  LV
Sbjct: 61  GVADVMRAEAQEIAETALDRASGRANGIAAITPERVIREGDPLEQIKDVIHRDVDIVMLV 120

Query: 121 LAANPGAEGPGPIITTMAKTMGAFPIPVTIVPGGLTDAEIDALS 164
           LAAN GAEGPGPI+TTM + +GAFPIPV IVPG LTD EIDALS
Sbjct: 121 LAANAGAEGPGPIVTTMLRGIGAFPIPVMIVPGNLTDDEIDALS 164


>ref|YP_575377.1| hypothetical protein Nham_0015 [Nitrobacter hamburgensis X14]
 gb|ABE60917.1| UspA [Nitrobacter hamburgensis X14]
          Length = 164

 Score =  272 bits (695), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 135/164 (82%), Positives = 149/164 (90%)

Query: 1   MTTQRRSYETGHKPKCLVIVDDTAEWDRAVYYASRWAIRVGGGVVMLRVIETEDQNQQWL 60
           M+ QRRSYETGHKPK LV+VDD+AEWDRAVYYASR AIRVGGG+VMLRVIETED+NQ+WL
Sbjct: 1   MSAQRRSYETGHKPKYLVVVDDSAEWDRAVYYASRRAIRVGGGIVMLRVIETEDRNQEWL 60

Query: 61  GVADIMRAEAEEAANEALDRAAGRANGIAAITPERVIREGDPIEQILDVIDKDVDIAALV 120
           GVA++MRAEA E AN ALDRAAGRANGIAAITPERVIREG+P+EQILDVI +DVDI+ LV
Sbjct: 61  GVAEVMRAEAYEGANAALDRAAGRANGIAAITPERVIREGNPLEQILDVIVQDVDISMLV 120

Query: 121 LAANPGAEGPGPIITTMAKTMGAFPIPVTIVPGGLTDAEIDALS 164
           LAA  G EGPGPIITT+AKT G FPIPVTIVPG LTD E+DALS
Sbjct: 121 LAAAGGPEGPGPIITTLAKTAGNFPIPVTIVPGSLTDDEVDALS 164


>ref|ZP_01045180.1| UspA [Nitrobacter sp. Nb-311A]
 gb|EAQ37185.1| UspA [Nitrobacter sp. Nb-311A]
          Length = 164

 Score =  267 bits (682), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 130/164 (79%), Positives = 149/164 (90%)

Query: 1   MTTQRRSYETGHKPKCLVIVDDTAEWDRAVYYASRWAIRVGGGVVMLRVIETEDQNQQWL 60
           M+ QRRSYE+GHKPK LV+VDD+AEWDRAVYYASR AIRVGGG+VMLRV+E ED+NQ+WL
Sbjct: 1   MSAQRRSYESGHKPKYLVVVDDSAEWDRAVYYASRRAIRVGGGIVMLRVVEPEDRNQEWL 60

Query: 61  GVADIMRAEAEEAANEALDRAAGRANGIAAITPERVIREGDPIEQILDVIDKDVDIAALV 120
           GVA++MRAEA E A+ ALDRA+GRANGIAAITPER+IREGDP+EQILD+I+KDVDI+ LV
Sbjct: 61  GVAEVMRAEAYEGADAALDRASGRANGIAAITPERIIREGDPLEQILDIIEKDVDISMLV 120

Query: 121 LAANPGAEGPGPIITTMAKTMGAFPIPVTIVPGGLTDAEIDALS 164
           LAA+ G EGPGPIITT+AKT G FPIPVTIVPG LTD  IDALS
Sbjct: 121 LAASGGPEGPGPIITTLAKTAGNFPIPVTIVPGTLTDDAIDALS 164


>ref|ZP_08628079.1| universal stress protein UspA-like protein [Bradyrhizobiaceae
           bacterium SG-6C]
 gb|EGP08988.1| universal stress protein UspA-like protein [Bradyrhizobiaceae
           bacterium SG-6C]
          Length = 164

 Score =  265 bits (676), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 135/164 (82%), Positives = 150/164 (91%)

Query: 1   MTTQRRSYETGHKPKCLVIVDDTAEWDRAVYYASRWAIRVGGGVVMLRVIETEDQNQQWL 60
           M+ QRRSYE GHKPKCLV+VDD+AE DRAVYYASRWA+RVGGGVVMLRVIETED+NQQWL
Sbjct: 1   MSNQRRSYEQGHKPKCLVVVDDSAEGDRAVYYASRWAVRVGGGVVMLRVIETEDRNQQWL 60

Query: 61  GVADIMRAEAEEAANEALDRAAGRANGIAAITPERVIREGDPIEQILDVIDKDVDIAALV 120
           GVADIMR EAEE AN ALDRA+GRANGIAAITPERVIREG+P EQILDVIDKDVDIA LV
Sbjct: 61  GVADIMREEAEEIANAALDRASGRANGIAAITPERVIREGNPGEQILDVIDKDVDIAMLV 120

Query: 121 LAANPGAEGPGPIITTMAKTMGAFPIPVTIVPGGLTDAEIDALS 164
           LAA+ GAEGPGPIIT +AK+ G FPIP+T+VPG L+D ++DALS
Sbjct: 121 LAASAGAEGPGPIITMLAKSAGTFPIPITVVPGNLSDIDLDALS 164


>ref|YP_316628.1| hypothetical protein Nwi_0008 [Nitrobacter winogradskyi Nb-255]
 gb|ABA03276.1| UspA [Nitrobacter winogradskyi Nb-255]
          Length = 164

 Score =  264 bits (674), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 128/164 (78%), Positives = 149/164 (90%)

Query: 1   MTTQRRSYETGHKPKCLVIVDDTAEWDRAVYYASRWAIRVGGGVVMLRVIETEDQNQQWL 60
           M+ QRRSYE+GHKPK LV+VDD+AEWDRAVYYASR AIRVGGG+VMLRV+E ED+NQ+WL
Sbjct: 1   MSAQRRSYESGHKPKYLVVVDDSAEWDRAVYYASRRAIRVGGGIVMLRVVEPEDRNQEWL 60

Query: 61  GVADIMRAEAEEAANEALDRAAGRANGIAAITPERVIREGDPIEQILDVIDKDVDIAALV 120
           G+A+++RAEA E A+ ALDRA+GRANGIAAITPER+IREGDP+EQILDVI+KD+DI+ LV
Sbjct: 61  GIAEVIRAEAYEGADAALDRASGRANGIAAITPERIIREGDPLEQILDVIEKDLDISMLV 120

Query: 121 LAANPGAEGPGPIITTMAKTMGAFPIPVTIVPGGLTDAEIDALS 164
           LAA+ G EGPGPIITT+AKT G FPIPVTIVPG LTD  IDALS
Sbjct: 121 LAASGGPEGPGPIITTLAKTAGNFPIPVTIVPGTLTDDAIDALS 164