BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0047.0007.p (397 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001202269.1| glutamate carboxypeptidase [Bradyrhizobium s... 624 e-177 ref|YP_001236261.1| M20 family peptidase [Bradyrhizobium sp. BTA... 622 e-176 ref|NP_767429.1| carboxypeptidase [Bradyrhizobium japonicum USDA... 621 e-176 ref|ZP_02190200.1| putative carboxypeptidase [alpha proteobacter... 377 e-102 ref|YP_002500487.1| peptidase dimerisation domain-containing pro... 338 1e-90 >ref|YP_001202269.1| glutamate carboxypeptidase [Bradyrhizobium sp. ORS 278] emb|CAL74019.1| putative peptidase M20 family; putative carboxypeptidase G2 (Glutamate carboxypeptidase) [Bradyrhizobium sp. ORS 278] Length = 376 Score = 624 bits (1609), Expect = e-177, Method: Compositional matrix adjust. Identities = 299/372 (80%), Positives = 335/372 (90%) Query: 26 SNPFETAVILDGIRRWVEIESPTERPDQVNKLADLVASGYRDLPATVERIAGRDGCGDHL 85 +N F++ IL+GIR+WVEIE+PTE PD+VN+LA +VA+GYR L A VERI GR+GCGDHL Sbjct: 5 NNTFDSRTILEGIRQWVEIETPTEAPDKVNELASVVAAGYRGLDAKVERIPGRNGCGDHL 64 Query: 86 VTRSSWGQDAPGILVLSHLDTVHPMGFIERLPFTVDGDSAFGPGIYDMKGGAYLAYHAFR 145 V RSSWGQ+ PGILVLSHLDTVHP+GFI+RLPF++DGD A+GPGIYDMKGGAYLAYHAFR Sbjct: 65 VARSSWGQEEPGILVLSHLDTVHPIGFIQRLPFSIDGDVAYGPGIYDMKGGAYLAYHAFR 124 Query: 146 QACADDARPPLGITQLYVSDEEIGSPTSRALIEAEGRKAKYVLVTEPARDGGKIVTGRKG 205 Q CAD R PLGIT L+VSDEEIGSPTSRALIE EGRKAKYVLVTEPARDGGKIVTGRKG Sbjct: 125 QICADGQRSPLGITHLFVSDEEIGSPTSRALIEEEGRKAKYVLVTEPARDGGKIVTGRKG 184 Query: 206 VARFDVFIKGAPAHAGTRPEDGRSAIRELGNVIQALEAMNDLKRGVTVNVGVVRGGTKPN 265 VARFDV I+G PAHAG RP+DGRSAIREL NVI ALEA+ND RG+TVNVGVVRGGT+PN Sbjct: 185 VARFDVSIRGVPAHAGARPQDGRSAIRELANVIHALEALNDPARGITVNVGVVRGGTRPN 244 Query: 266 VIAEEAYAEVDMRVPTMADADELVPKILGITSRTEGVSVKISGELNRPPYEKSNAGAALY 325 VIAEEA+AEVD R+PT DADE+VPKILG+ SR+EGV+V++ GE+NRPPY K NAGAAL+ Sbjct: 245 VIAEEAHAEVDARLPTPGDADEIVPKILGLKSRSEGVTVEVKGEVNRPPYVKGNAGAALF 304 Query: 326 EHARGLAAELGFELADVFTGGGSDGNFTAPHTATLDGLGVDGKGAHTHYEQLYISSIEPR 385 EHAR LA ELGF+L D +TGGGSDGNFTAP TATLDGLGVDGKGAHTHYEQ+YISSIEPR Sbjct: 305 EHARTLAEELGFDLVDTYTGGGSDGNFTAPFTATLDGLGVDGKGAHTHYEQMYISSIEPR 364 Query: 386 ARLLHRLYQTLR 397 ARLLHRLYQTLR Sbjct: 365 ARLLHRLYQTLR 376 >ref|YP_001236261.1| M20 family peptidase [Bradyrhizobium sp. BTAi1] gb|ABQ32355.1| putative peptidase M20 family [Bradyrhizobium sp. BTAi1] Length = 376 Score = 622 bits (1605), Expect = e-176, Method: Compositional matrix adjust. Identities = 294/375 (78%), Positives = 332/375 (88%) Query: 23 SMSSNPFETAVILDGIRRWVEIESPTERPDQVNKLADLVASGYRDLPATVERIAGRDGCG 82 ++ +NPF++ ILDGIR+WVEIE+PTE PDQ+N+L LV+ GYR L A VER++GRDGCG Sbjct: 2 TVPTNPFDSRTILDGIRQWVEIETPTEAPDQINQLVSLVSEGYRGLDAVVERVSGRDGCG 61 Query: 83 DHLVTRSSWGQDAPGILVLSHLDTVHPMGFIERLPFTVDGDSAFGPGIYDMKGGAYLAYH 142 DHL+ RS WGQ PGIL+LSHLDTVHP+GF+ RLPF++DGD AFGPGIYDMKGGAYLAYH Sbjct: 62 DHLIARSGWGQQEPGILILSHLDTVHPIGFLRRLPFSIDGDVAFGPGIYDMKGGAYLAYH 121 Query: 143 AFRQACADDARPPLGITQLYVSDEEIGSPTSRALIEAEGRKAKYVLVTEPARDGGKIVTG 202 AFR C R PLGIT L+VSDEEIGSPTSR LIE EGRKAKYVLVTEPARDGG+IVTG Sbjct: 122 AFRHLCLTGKRSPLGITHLFVSDEEIGSPTSRVLIEEEGRKAKYVLVTEPARDGGRIVTG 181 Query: 203 RKGVARFDVFIKGAPAHAGTRPEDGRSAIRELGNVIQALEAMNDLKRGVTVNVGVVRGGT 262 RKGVARFDV I+G PAHAG RP+DGRSAIREL NVI ALEA+NDL+RG+TVNVGVVRGGT Sbjct: 182 RKGVARFDVTIRGVPAHAGARPQDGRSAIRELANVIHALEALNDLERGITVNVGVVRGGT 241 Query: 263 KPNVIAEEAYAEVDMRVPTMADADELVPKILGITSRTEGVSVKISGELNRPPYEKSNAGA 322 +PNVIAEEAYAEVD R+PT ADA+E+VPKILG+TSR+EGVSV+++G +NRPPY K NAGA Sbjct: 242 RPNVIAEEAYAEVDARLPTPADAEEIVPKILGLTSRSEGVSVEVTGGVNRPPYVKGNAGA 301 Query: 323 ALYEHARGLAAELGFELADVFTGGGSDGNFTAPHTATLDGLGVDGKGAHTHYEQLYISSI 382 AL+EHAR LA E+GFEL D TGGGSDGNFTAP TATLDGLGVDGKGAHTHYEQ+YISSI Sbjct: 302 ALFEHARSLAEEIGFELVDTITGGGSDGNFTAPFTATLDGLGVDGKGAHTHYEQMYISSI 361 Query: 383 EPRARLLHRLYQTLR 397 EPR RLLHRLYQTLR Sbjct: 362 EPRTRLLHRLYQTLR 376 >ref|NP_767429.1| carboxypeptidase [Bradyrhizobium japonicum USDA 110] dbj|BAC46054.1| bll0789 [Bradyrhizobium japonicum USDA 110] Length = 385 Score = 621 bits (1601), Expect = e-176, Method: Compositional matrix adjust. Identities = 297/383 (77%), Positives = 331/383 (86%), Gaps = 1/383 (0%) Query: 16 KFTGDDNSMS-SNPFETAVILDGIRRWVEIESPTERPDQVNKLADLVASGYRDLPATVER 74 +F G D M+ SN F+ ILDGIRRWVEIE+PTE P+QVN+L LVA YRDLP T+ER Sbjct: 3 RFKGIDAPMTNSNWFDNQTILDGIRRWVEIETPTEAPEQVNRLVSLVADHYRDLPVTLER 62 Query: 75 IAGRDGCGDHLVTRSSWGQDAPGILVLSHLDTVHPMGFIERLPFTVDGDSAFGPGIYDMK 134 IAG DGCGDHL+ RS+WGQD PGILVLSHLDTVHP+GFIERLPF V+GDSAFGPGIYDMK Sbjct: 63 IAGVDGCGDHLLARSAWGQDRPGILVLSHLDTVHPLGFIERLPFKVEGDSAFGPGIYDMK 122 Query: 135 GGAYLAYHAFRQACADDARPPLGITQLYVSDEEIGSPTSRALIEAEGRKAKYVLVTEPAR 194 GGAY+A+HAFR CA R PLGIT L+ SDEEIGSPTSRALIE EGRKAKYVLVTEPAR Sbjct: 123 GGAYIAHHAFRALCATAERSPLGITHLFTSDEEIGSPTSRALIEKEGRKAKYVLVTEPAR 182 Query: 195 DGGKIVTGRKGVARFDVFIKGAPAHAGTRPEDGRSAIRELGNVIQALEAMNDLKRGVTVN 254 DGGKIVTGRKGV RF VFIKG PAHAG+RPEDGRSA+REL N+I LE MND RGV+VN Sbjct: 183 DGGKIVTGRKGVGRFQVFIKGVPAHAGSRPEDGRSAVRELANIILTLEGMNDPARGVSVN 242 Query: 255 VGVVRGGTKPNVIAEEAYAEVDMRVPTMADADELVPKILGITSRTEGVSVKISGELNRPP 314 VGVVRGGT+PNV EEAYAE+D+RVP+ DADE V KIL + S+T GV+V+++GELNRPP Sbjct: 243 VGVVRGGTRPNVTPEEAYAEIDLRVPSFTDADEFVGKILALRSKTNGVTVRVTGELNRPP 302 Query: 315 YEKSNAGAALYEHARGLAAELGFELADVFTGGGSDGNFTAPHTATLDGLGVDGKGAHTHY 374 YEK NAGA+LYEHAR LA E+GFEL D +TGGGSDGNFTAPHT TLDGLGVDGKGAHTHY Sbjct: 303 YEKGNAGASLYEHARTLATEIGFELIDTYTGGGSDGNFTAPHTGTLDGLGVDGKGAHTHY 362 Query: 375 EQLYISSIEPRARLLHRLYQTLR 397 EQLY+SS+EPRARLL+RLYQTLR Sbjct: 363 EQLYVSSLEPRARLLYRLYQTLR 385 >ref|ZP_02190200.1| putative carboxypeptidase [alpha proteobacterium BAL199] gb|EDP62923.1| putative carboxypeptidase [alpha proteobacterium BAL199] Length = 386 Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust. Identities = 201/368 (54%), Positives = 257/368 (69%), Gaps = 4/368 (1%) Query: 34 ILDGIRRWVEIESPTERPDQVNKLADLVASGYRDLPATVERIAGRDGCGDHLVTRS-SWG 92 ILDGI WVE+E+PT +VNKLA+ V + + D+ + +RI GRDG GDH++ RS W Sbjct: 19 ILDGILDWVEVETPTYHGAEVNKLAEKVRALWADVGCSAQRIPGRDGFGDHVLVRSPDWK 78 Query: 93 QDAPGILVLSHLDTVHPMGFIE-RLPFTVDGDSAFGPGIYDMKGGAYLAYHAFRQACADD 151 + P +LVLSH+DTVHPMG E P +GDS FGPGIYDMK GAYL Y+A+R Sbjct: 79 EGEPSLLVLSHMDTVHPMGTKEGPNPIRREGDSVFGPGIYDMKAGAYLPYYAWRHLKRLG 138 Query: 152 ARPPLGITQLYVSDEEIGSPTSRALIEAEGRKAKYVLVTEPARDGGKIVTGRKGVARFDV 211 + +T LYVS+EE+GSPTSR +IE E +KAKYVLVTEPARDGGKIVT RKGV RF++ Sbjct: 139 RAHGMPVTWLYVSEEEVGSPTSREVIEREAKKAKYVLVTEPARDGGKIVTARKGVGRFEL 198 Query: 212 FIKGAPAHAGTRPEDGRSAIRELGNVIQALEAMNDLKRGVTVNVGVVRGGTKPNVIAEEA 271 + G PAHAG + +DGRSA++EL + I +E D RGVT NVG+V+ GT NV+ +A Sbjct: 199 TVTGRPAHAGAQHQDGRSAVKELAHHILEIEGYTDYDRGVTTNVGLVQAGTGVNVVPRDA 258 Query: 272 YAEVDMRVPTMADADELVPKILGITSRTEGVSVKISGELNRPPYEKSNAGAALYEHARGL 331 AE+D+RV T AD +EL KIL +R V+V +G +NRPPYE+S +L++ A+ L Sbjct: 259 TAEIDLRVITAADGEELTAKILNRVARDPDVTVVATGGMNRPPYERSAEIESLFDQAKTL 318 Query: 332 AAELGFELADV-FTGGGSDGNFTAP-HTATLDGLGVDGKGAHTHYEQLYISSIEPRARLL 389 AA+ G +L TGGGSDGNFTA TLDGLG DGKGAHT +EQ+Y+SS+EPRAR+ Sbjct: 319 AAKGGLDLVSTPLTGGGSDGNFTAALGVPTLDGLGADGKGAHTLHEQIYVSSLEPRARMW 378 Query: 390 HRLYQTLR 397 L L+ Sbjct: 379 VELLAGLK 386 >ref|YP_002500487.1| peptidase dimerisation domain-containing protein [Methylobacterium nodulans ORS 2060] gb|ACL60184.1| peptidase dimerisation domain protein [Methylobacterium nodulans ORS 2060] Length = 377 Score = 338 bits (866), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 192/365 (52%), Positives = 238/365 (65%), Gaps = 10/365 (2%) Query: 38 IRRWVEIESPTERPDQVNKLADLVASGYRDLPATVERIAGRDGCGDHLVTRSSWGQDAPG 97 I RW+ +ESPT+ VN++ DLVA+ ERI GRDG GD L+ R+ + P Sbjct: 17 IGRWLAVESPTDDAAGVNRMMDLVAAEADGAGIPWERIGGRDGLGDSLILRAGPHRSGPS 76 Query: 98 ILVLSHLDTVHPMGFIER-LPFTVDGDSAFGPGIYDMKGGAYLAYHAFRQACADDA--RP 154 +LVLSHLDTVHP+G ++ LP V+ D +GPG+YDMKGGA+LA F A A RP Sbjct: 77 LLVLSHLDTVHPLGTLDADLPVRVEDDRLYGPGVYDMKGGAWLALQGFVAAAKGGAAERP 136 Query: 155 PLGITQLYVSDEEIGSPTSRALIEAEGRKAKYVLVTEPARDGGKIVTGRKGVARFDVFIK 214 + L+ SDEEIGSPT+R LIE GR+A VLVTEPARDGGK+VTGRKGV RFDV ++ Sbjct: 137 ---LVFLFTSDEEIGSPTTRGLIEDLGRQAAAVLVTEPARDGGKVVTGRKGVGRFDVHVE 193 Query: 215 GAPAHAGTRPEDGRSAIRELGNVIQALEAMNDLKRGVTVNVGVVRGGTKPNVIAEEAYAE 274 G PAHAG+R DGR+AIRE +I +E M D RG+T VG ++GGT NVI + Sbjct: 194 GRPAHAGSRHADGRNAIREAARLILEIEGMTDYARGITTTVGRIQGGTAENVIPQHCRFT 253 Query: 275 VDMRVPTMADADELVPKILGITSRTEGVSVKISGELNRPPYEKSNAGAALYEHARGLA-A 333 VD+R T D +ILG+ + + SV ++G +NRPPY +S LY+HAR LA A Sbjct: 254 VDLRAVTEEDGHACEARILGLRAAPD-FSVTVTGGMNRPPYPRSETTGRLYDHARRLAEA 312 Query: 334 ELGFELADV-FTGGGSDGNFTAP-HTATLDGLGVDGKGAHTHYEQLYISSIEPRARLLHR 391 ELG L +V TGGGSDGNFTA TLDGLG+DG GAHT E I SI PR RL+ R Sbjct: 313 ELGLSLGEVPLTGGGSDGNFTAALGIPTLDGLGIDGDGAHTLREYGLIPSIAPRTRLMQR 372 Query: 392 LYQTL 396 L +TL Sbjct: 373 LLETL 377