BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0047.0006.p (245 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004106555.1| putative methyltransferase [Rhodopseudomonas... 372 e-101 ref|NP_945795.1| tRNA (guanine-N(7)-)-methyltransferase [Rhodops... 366 2e-99 ref|YP_001989482.1| tRNA (guanine-N(7)-)-methyltransferase [Rhod... 365 3e-99 ref|YP_530368.1| tRNA (guanine-N(7)-)-methyltransferase [Rhodops... 362 3e-98 ref|YP_002287524.1| tRNA (guanine-N(7)-)-methyltransferase [Olig... 358 3e-97 >ref|YP_004106555.1| putative methyltransferase [Rhodopseudomonas palustris DX-1] gb|ADU41822.1| putative methyltransferase [Rhodopseudomonas palustris DX-1] Length = 271 Score = 372 bits (955), Expect = e-101, Method: Compositional matrix adjust. Identities = 190/247 (76%), Positives = 202/247 (81%), Gaps = 4/247 (1%) Query: 2 TPAPGDRGDRDSPDDGTM----AHARGSFFGRRKGHKLRPHQADLIDTLLPHLAVDISAP 57 P DR + DGTM H +GSFFGRRKGHKLR HQADLI+ LLPHLA+ I P Sbjct: 24 APDSDDRDGDVTMHDGTMHDVTMHGQGSFFGRRKGHKLRAHQADLIEHLLPHLALQIGGP 83 Query: 58 APEALTALFDDGIENVRLEIGFGGGEHLIAEALAFPTTGFIGCEPYVNGMAKILTQIEAL 117 APE LTALFD IE+VRLEIGFGGGEHLIAEALA P TGFIG EPYVNGMAKIL +IEA Sbjct: 84 APEPLTALFDPPIEHVRLEIGFGGGEHLIAEALAHPDTGFIGAEPYVNGMAKILARIEAD 143 Query: 118 NIGNIRLFAGDAAELLAWAPPRSLARIDLIHPDPWPKRRHWKRRFVQDATVTAMMRLLPP 177 NI NIRLFAGDA+ELLAW P SLARIDLIHPDPWPKRRHWKRRFVQD TVTAM R L P Sbjct: 144 NIRNIRLFAGDASELLAWVPAGSLARIDLIHPDPWPKRRHWKRRFVQDGTVTAMSRALAP 203 Query: 178 GGEFRFVSDIDDYCAWTLAHLMRSPDFAWLAERAIDWQQPWPNYTMTRYGAKAEREGRKA 237 GEFRFVSDID Y AWTLAHL+R+PDF WLAERA DW++PWPNYTMTRYG KAEREGR+A Sbjct: 204 HGEFRFVSDIDGYNAWTLAHLLRAPDFDWLAERADDWRKPWPNYTMTRYGRKAEREGRRA 263 Query: 238 AYLRFRR 244 YLRF R Sbjct: 264 NYLRFER 270 >ref|NP_945795.1| tRNA (guanine-N(7)-)-methyltransferase [Rhodopseudomonas palustris CGA009] sp|Q6NCM9.1|TRMB_RHOPA RecName: Full=tRNA (guanine-N(7)-)-methyltransferase; AltName: Full=tRNA(m7G46)-methyltransferase emb|CAE25886.1| Putative methyltransferase [Rhodopseudomonas palustris CGA009] Length = 265 Score = 366 bits (939), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 180/241 (74%), Positives = 198/241 (82%) Query: 5 PGDRGDRDSPDDGTMAHARGSFFGRRKGHKLRPHQADLIDTLLPHLAVDISAPAPEALTA 64 P D + D + H +GSFFGRRKGHKLR HQADLI+ LLPHL++ I +PAPE LT Sbjct: 25 PDSAPDNEDHDGDVVMHGQGSFFGRRKGHKLRAHQADLIENLLPHLSLQIDSPAPEPLTT 84 Query: 65 LFDDGIENVRLEIGFGGGEHLIAEALAFPTTGFIGCEPYVNGMAKILTQIEALNIGNIRL 124 LFD +E++RLEIGFGGGEHLIAEALA P TGFIG EPYVNGMAKIL +IEA NI NIRL Sbjct: 85 LFDPPVEHMRLEIGFGGGEHLIAEALAHPDTGFIGAEPYVNGMAKILARIEAENIRNIRL 144 Query: 125 FAGDAAELLAWAPPRSLARIDLIHPDPWPKRRHWKRRFVQDATVTAMMRLLPPGGEFRFV 184 FAGDA+ELLAW P SLARIDLIHPDPWPKRRHWKRRFVQDATV AM R L P GEFRFV Sbjct: 145 FAGDASELLAWVPAGSLARIDLIHPDPWPKRRHWKRRFVQDATVAAMARALTPHGEFRFV 204 Query: 185 SDIDDYCAWTLAHLMRSPDFAWLAERAIDWQQPWPNYTMTRYGAKAEREGRKAAYLRFRR 244 DID Y AWTLAHL+R+P F WLA+RA DW++PWPNYTMTRYG KAEREGR+A YLRF R Sbjct: 205 CDIDGYTAWTLAHLLRAPCFDWLAQRADDWRKPWPNYTMTRYGRKAEREGRRANYLRFER 264 Query: 245 L 245 L Sbjct: 265 L 265 >ref|YP_001989482.1| tRNA (guanine-N(7)-)-methyltransferase [Rhodopseudomonas palustris TIE-1] gb|ACE99006.1| tRNA (guanine-N(7)-)-methyltransferase [Rhodopseudomonas palustris TIE-1] Length = 265 Score = 365 bits (938), Expect = 3e-99, Method: Compositional matrix adjust. Identities = 180/241 (74%), Positives = 198/241 (82%) Query: 5 PGDRGDRDSPDDGTMAHARGSFFGRRKGHKLRPHQADLIDTLLPHLAVDISAPAPEALTA 64 P D + D + H +GSFFGRRKGHKLR HQADLI+ LLPHL++ I +PAPE LT Sbjct: 25 PDSAPDNEDHDGDVVMHGQGSFFGRRKGHKLRAHQADLIENLLPHLSLQIDSPAPEPLTT 84 Query: 65 LFDDGIENVRLEIGFGGGEHLIAEALAFPTTGFIGCEPYVNGMAKILTQIEALNIGNIRL 124 LFD +E++RLEIGFGGGEHLIAEALA P TGFIG EPYVNGMAKIL +IEA NI NIRL Sbjct: 85 LFDLPVEHMRLEIGFGGGEHLIAEALAHPDTGFIGAEPYVNGMAKILARIEAENIRNIRL 144 Query: 125 FAGDAAELLAWAPPRSLARIDLIHPDPWPKRRHWKRRFVQDATVTAMMRLLPPGGEFRFV 184 FAGDA+ELLAW P SLARIDLIHPDPWPKRRHWKRRFVQDATV AM R L P GEFRFV Sbjct: 145 FAGDASELLAWVPAGSLARIDLIHPDPWPKRRHWKRRFVQDATVAAMARALTPHGEFRFV 204 Query: 185 SDIDDYCAWTLAHLMRSPDFAWLAERAIDWQQPWPNYTMTRYGAKAEREGRKAAYLRFRR 244 DID Y AWTLAHL+R+P F WLA+RA DW++PWPNYTMTRYG KAEREGR+A YLRF R Sbjct: 205 CDIDGYTAWTLAHLLRAPCFDWLAQRADDWRKPWPNYTMTRYGRKAEREGRRANYLRFER 264 Query: 245 L 245 L Sbjct: 265 L 265 >ref|YP_530368.1| tRNA (guanine-N(7)-)-methyltransferase [Rhodopseudomonas palustris BisB18] sp|Q21C37.1|TRMB_RHOPB RecName: Full=tRNA (guanine-N(7)-)-methyltransferase; AltName: Full=tRNA(m7G46)-methyltransferase gb|ABD86049.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB18] Length = 251 Score = 362 bits (928), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 177/230 (76%), Positives = 189/230 (82%) Query: 15 DDGTMAHARGSFFGRRKGHKLRPHQADLIDTLLPHLAVDISAPAPEALTALFDDGIENVR 74 D+ A +FFGRRKGHKLR HQADLI LLP L+ D+ APAP L LF GI VR Sbjct: 8 DEAATAMPERAFFGRRKGHKLRSHQADLIAELLPRLSFDLGAPAPARLETLFASGIAEVR 67 Query: 75 LEIGFGGGEHLIAEALAFPTTGFIGCEPYVNGMAKILTQIEALNIGNIRLFAGDAAELLA 134 LEIGFGGGEHLIAEALA PTTGFIGCEPYVNGMAKIL QIEA +GNIRLFAGDAAELLA Sbjct: 68 LEIGFGGGEHLIAEALAHPTTGFIGCEPYVNGMAKILAQIEARELGNIRLFAGDAAELLA 127 Query: 135 WAPPRSLARIDLIHPDPWPKRRHWKRRFVQDATVTAMMRLLPPGGEFRFVSDIDDYCAWT 194 WAPP SLAR+DLIHPDPWPKRRHWKRRFVQD +V AM R+L GEFRFVSDIDDYCAWT Sbjct: 128 WAPPASLARVDLIHPDPWPKRRHWKRRFVQDTSVAAMARVLHEDGEFRFVSDIDDYCAWT 187 Query: 195 LAHLMRSPDFAWLAERAIDWQQPWPNYTMTRYGAKAEREGRKAAYLRFRR 244 LAHL+RS +F W AERA DWQ P+ YTMTRYG KAEREGR+AAYL FRR Sbjct: 188 LAHLLRSKEFCWTAERACDWQLPFAGYTMTRYGRKAEREGRRAAYLHFRR 237 >ref|YP_002287524.1| tRNA (guanine-N(7)-)-methyltransferase [Oligotropha carboxidovorans OM5] ref|YP_004630997.1| tRNA (guanine-N(7)-)-methyltransferase TrmB [Oligotropha carboxidovorans OM5] gb|ACI91659.1| tRNA (guanine-N(7)-)-methyltransferase [Oligotropha carboxidovorans OM5] gb|AEI01182.1| tRNA (guanine-N(7)-)-methyltransferase TrmB [Oligotropha carboxidovorans OM4] gb|AEI04756.1| tRNA (guanine-N(7)-)-methyltransferase TrmB [Oligotropha carboxidovorans OM5] Length = 240 Score = 358 bits (920), Expect = 3e-97, Method: Compositional matrix adjust. Identities = 176/232 (75%), Positives = 192/232 (82%) Query: 14 PDDGTMAHARGSFFGRRKGHKLRPHQADLIDTLLPHLAVDISAPAPEALTALFDDGIENV 73 P D A G+FFGRRKGHKLRPH A+LI+ LLP LA+DI++P PE LTALF G V Sbjct: 9 PSDDAAARPAGAFFGRRKGHKLRPHHAELIEELLPRLALDITSPPPENLTALFPAGTRTV 68 Query: 74 RLEIGFGGGEHLIAEALAFPTTGFIGCEPYVNGMAKILTQIEALNIGNIRLFAGDAAELL 133 RLEIGFGGGEHL+AEA AFP TGFIGCEPYVNGMAKIL QIEA + NIRLFAGDAAELL Sbjct: 69 RLEIGFGGGEHLLAEAEAFPDTGFIGCEPYVNGMAKILAQIEARGLINIRLFAGDAAELL 128 Query: 134 AWAPPRSLARIDLIHPDPWPKRRHWKRRFVQDATVTAMMRLLPPGGEFRFVSDIDDYCAW 193 AW PPRSLARIDLIHPDPWPKRRHWKRRFVQDAT+ AM R L P GEFRFV DIDDY AW Sbjct: 129 AWMPPRSLARIDLIHPDPWPKRRHWKRRFVQDATIAAMARALVPHGEFRFVCDIDDYTAW 188 Query: 194 TLAHLMRSPDFAWLAERAIDWQQPWPNYTMTRYGAKAEREGRKAAYLRFRRL 245 TL H+ + DF WLAERA DW++PW YTMTRYGAKA REGRKA+YLRF+R+ Sbjct: 189 TLWHMQHAADFIWLAERADDWRKPWSGYTMTRYGAKATREGRKASYLRFQRI 240