BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0046.0036.p         (132 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_772426.1| integral membrane protein [Bradyrhizobium japon...   193   8e-48
ref|YP_001206919.1| hypothetical protein BRADO5003 [Bradyrhizobi...   171   4e-41
ref|YP_001241340.1| hypothetical protein BBta_5471 [Bradyrhizobi...   160   5e-38
ref|ZP_08630616.1| hypothetical protein CSIRO_3726 [Bradyrhizobi...   146   9e-34
ref|YP_568852.1| hypothetical protein RPD_1715 [Rhodopseudomonas...   142   2e-32

>ref|NP_772426.1| integral membrane protein [Bradyrhizobium japonicum USDA 110]
 dbj|BAC51051.1| blr5786 [Bradyrhizobium japonicum USDA 110]
          Length = 132

 Score =  193 bits (490), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 97/132 (73%), Positives = 112/132 (84%)

Query: 1   MIHSSQLLRRALLADAVFSGVSAIAMVLGAGALASLLGLPEALLRETGLFLIAYTALVGW 60
           MI +S  LRRALLADA+FSG +A+    GAGA A+L  LPEALLRETGLFLIAYTALVGW
Sbjct: 1   MIDASTFLRRALLADAIFSGAAALGFTFGAGAFATLFNLPEALLRETGLFLIAYTALVGW 60

Query: 61  LGTRMSVPKPLVMLVVVGNAAWTLASIALLLSGAVSPNLFGTIVILAQAVATGVFAELQY 120
              R +VPKPLV+LVVVGNAAWT+ SIALLLSGAVSPN+ G ++++AQA+ATGVFAELQY
Sbjct: 61  FAARAAVPKPLVLLVVVGNAAWTVGSIALLLSGAVSPNIAGELMVVAQAIATGVFAELQY 120

Query: 121 VGLRRSGETVAA 132
           VGLR+SG  VAA
Sbjct: 121 VGLRKSGRVVAA 132


>ref|YP_001206919.1| hypothetical protein BRADO5003 [Bradyrhizobium sp. ORS 278]
 emb|CAL78702.1| conserved hypothetical protein; putative membrane protein
           [Bradyrhizobium sp. ORS 278]
          Length = 132

 Score =  171 bits (432), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 86/132 (65%), Positives = 105/132 (79%)

Query: 1   MIHSSQLLRRALLADAVFSGVSAIAMVLGAGALASLLGLPEALLRETGLFLIAYTALVGW 60
           MI SS LLRRAL+ADAVFSG++ +A+   A  LA+L+ LPEALLRETGLFLI Y ++VGW
Sbjct: 1   MIVSSTLLRRALIADAVFSGIAGLALTFDASPLAALMQLPEALLRETGLFLIVYASVVGW 60

Query: 61  LGTRMSVPKPLVMLVVVGNAAWTLASIALLLSGAVSPNLFGTIVILAQAVATGVFAELQY 120
           LG+R   PKPL++LV+ GNAAWT+ SI LL SG V+PN+ G I + AQAV TGVFAELQY
Sbjct: 61  LGSRALTPKPLILLVIAGNAAWTVGSIGLLFSGLVTPNVLGEIFVAAQAVGTGVFAELQY 120

Query: 121 VGLRRSGETVAA 132
           +GLRRS E + A
Sbjct: 121 MGLRRSTEALTA 132


>ref|YP_001241340.1| hypothetical protein BBta_5471 [Bradyrhizobium sp. BTAi1]
 gb|ABQ37434.1| putative membrane protein of unknown function [Bradyrhizobium sp.
           BTAi1]
          Length = 168

 Score =  160 bits (405), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 81/121 (66%), Positives = 98/121 (80%)

Query: 1   MIHSSQLLRRALLADAVFSGVSAIAMVLGAGALASLLGLPEALLRETGLFLIAYTALVGW 60
           MI SS LLRRALLADA+FSGV+ + + + AG LA+L+ LP+ALLRETGLFLIAYT LVGW
Sbjct: 1   MITSSTLLRRALLADAIFSGVAGLVLTVDAGPLATLMQLPDALLRETGLFLIAYTILVGW 60

Query: 61  LGTRMSVPKPLVMLVVVGNAAWTLASIALLLSGAVSPNLFGTIVILAQAVATGVFAELQY 120
           L +R + P+PLV+LV+ GNAAWT+ SI LL SG V+PN  G I + AQAV TGVFAELQY
Sbjct: 61  LASRATAPRPLVLLVIAGNAAWTVGSIGLLFSGLVAPNALGEIFVAAQAVGTGVFAELQY 120

Query: 121 V 121
           +
Sbjct: 121 M 121


>ref|ZP_08630616.1| hypothetical protein CSIRO_3726 [Bradyrhizobiaceae bacterium SG-6C]
 gb|EGP06995.1| hypothetical protein CSIRO_3726 [Bradyrhizobiaceae bacterium SG-6C]
          Length = 133

 Score =  146 bits (369), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 79/132 (59%), Positives = 96/132 (72%)

Query: 1   MIHSSQLLRRALLADAVFSGVSAIAMVLGAGALASLLGLPEALLRETGLFLIAYTALVGW 60
           MIH S  LRRAL  DA+FSGVSA+ +V GAG LASL  LPE  LR TGL L+A+   VG+
Sbjct: 1   MIHPSPFLRRALQIDALFSGVSALLLVFGAGFLASLTNLPEDFLRNTGLVLVAFVLGVGY 60

Query: 61  LGTRMSVPKPLVMLVVVGNAAWTLASIALLLSGAVSPNLFGTIVILAQAVATGVFAELQY 120
           L TR  +PK  V  V+  NA WT+ SIALL SG VSPNL G + I+AQA+A GVFAEL++
Sbjct: 61  LATRDMMPKIAVWAVIAINAVWTIDSIALLASGWVSPNLLGQVFIVAQAIAVGVFAELEF 120

Query: 121 VGLRRSGETVAA 132
           +GLR+S + VAA
Sbjct: 121 IGLRKSADAVAA 132


>ref|YP_568852.1| hypothetical protein RPD_1715 [Rhodopseudomonas palustris BisB5]
 gb|ABE38951.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5]
          Length = 132

 Score =  142 bits (358), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 77/126 (61%), Positives = 97/126 (76%)

Query: 1   MIHSSQLLRRALLADAVFSGVSAIAMVLGAGALASLLGLPEALLRETGLFLIAYTALVGW 60
           MIH S LLRRAL ADA+ SG  A+ +  GAGAL+  L LP+ LL ETGLFLIAY A VGW
Sbjct: 1   MIHPSLLLRRALQADALVSGAMAVLLAFGAGALSPWLSLPQPLLFETGLFLIAYAAFVGW 60

Query: 61  LGTRMSVPKPLVMLVVVGNAAWTLASIALLLSGAVSPNLFGTIVILAQAVATGVFAELQY 120
           LG R ++ KP+V++V++GNA WTL S+ALL+SGAV+PN  G   ++ QA+A GVFAELQ+
Sbjct: 61  LGARATLIKPVVVVVIIGNALWTLGSVALLISGAVTPNALGIAFVVMQAIAVGVFAELQF 120

Query: 121 VGLRRS 126
           +GL RS
Sbjct: 121 MGLSRS 126