BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0046.0030.p (200 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_772428.1| hypothetical protein blr5788 [Bradyrhizobium ja... 260 8e-68 ref|YP_001241343.1| hypothetical protein BBta_5474 [Bradyrhizobi... 220 8e-56 ref|YP_004107836.1| hypothetical protein Rpdx1_1482 [Rhodopseudo... 208 4e-52 ref|YP_001993364.1| hypothetical protein Rpal_4393 [Rhodopseudom... 204 7e-51 ref|NP_949209.1| hypothetical protein RPA3872 [Rhodopseudomonas ... 202 2e-50 >ref|NP_772428.1| hypothetical protein blr5788 [Bradyrhizobium japonicum USDA 110] dbj|BAC51053.1| blr5788 [Bradyrhizobium japonicum USDA 110] Length = 207 Score = 260 bits (664), Expect = 8e-68, Method: Compositional matrix adjust. Identities = 127/194 (65%), Positives = 146/194 (75%), Gaps = 5/194 (2%) Query: 4 LAFATVVMALAGANPGQAGAETISSSYTSTAPKACRMIGKPSEEDGSTTRVCPGKSGLVV 63 LA + L GAN A+++ S+YTSTAPK CR +GKPSE DGSTTR+CPGK GL+V Sbjct: 15 LAVLLMCTVLGGAN-----AQSVGSTYTSTAPKDCRQLGKPSELDGSTTRMCPGKDGLMV 69 Query: 64 LINEGDLREVVSVGRNREAAAREPAAQAWFGPFSSTGDTVEWRAASGKPFAIIQRWQIAD 123 LI E DLRE+VSVGRNR+ AA EPAA+ WF PF+S+ TVEW AA KPFAIIQRW IAD Sbjct: 70 LIAEDDLREIVSVGRNRKEAAEEPAAKTWFAPFNSSETTVEWHAAGQKPFAIIQRWHIAD 129 Query: 124 NSEQDKRGGPVSRAMLAVTRLPPGDVCHVAYVDVAANPDANALARQAADDFARDFKCGTD 183 S+ DK+G P ++AML VTRLPPG VCHVAYVD ANP+AN LAR+AADDFAR F CG D Sbjct: 130 GSDPDKQGRPNTKAMLVVTRLPPGPVCHVAYVDAIANPNANELARKAADDFARGFTCGKD 189 Query: 184 TVKTIGQSGRTTSL 197 VK IG GR L Sbjct: 190 EVKVIGTRGRAVEL 203 >ref|YP_001241343.1| hypothetical protein BBta_5474 [Bradyrhizobium sp. BTAi1] gb|ABQ37437.1| putative exported protein of unknown function [Bradyrhizobium sp. BTAi1] Length = 210 Score = 220 bits (561), Expect = 8e-56, Method: Compositional matrix adjust. Identities = 117/198 (59%), Positives = 142/198 (71%), Gaps = 2/198 (1%) Query: 2 KYLAFATVVMALAGANPGQAGAETISSSYTSTAPKACRMIGKPSEEDGSTTRVCPGKSGL 61 + LA+ + L GA QA AETI S Y+S A K CR I + D S+T++CPGK+GL Sbjct: 14 QVLAWIGTALLLTGACGSQATAETIGSIYSSAAAKDCRTISGKKDGD-SSTQICPGKNGL 72 Query: 62 VVLINEGDLREVVSVGRNREAAAREPAAQAWFGPFSSTGDTVEWRAASGKPFAIIQRWQI 121 ++L+NEGDLR+ VSVGR+ AAA+EPAA+ WFGPF+S G+TVEWR A G+PFAIIQRWQI Sbjct: 73 ILLVNEGDLRQTVSVGRSARAAAKEPAAETWFGPFNSAGNTVEWRVADGRPFAIIQRWQI 132 Query: 122 ADNSEQDKRGGPVSRAMLAVTRLPPGDVCHVAYVDVAANPDANALARQAADDFARDFKCG 181 ADN +Q K GP + ML VTRLPPG VCHVAYVD AN +AN LARQAAD+ AR F C Sbjct: 133 ADNDDQGK-SGPKDKPMLVVTRLPPGPVCHVAYVDATANANANELARQAADETARSFICS 191 Query: 182 TDTVKTIGQSGRTTSLVR 199 D V+ +G GR L R Sbjct: 192 KDEVRIVGTRGRVIGLAR 209 >ref|YP_004107836.1| hypothetical protein Rpdx1_1482 [Rhodopseudomonas palustris DX-1] gb|ADU43103.1| hypothetical protein Rpdx1_1482 [Rhodopseudomonas palustris DX-1] Length = 209 Score = 208 bits (529), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 108/190 (56%), Positives = 134/190 (70%), Gaps = 3/190 (1%) Query: 9 VVMALAGANPGQAGAETISSSYTSTAPKACRMIGKPSEEDGSTTRVCPGKSGLVVLINEG 68 + + +A A PG+A E +SS Y+STAPKAC++ + S +CPG+ GLVV ++E Sbjct: 18 ITLPVALATPGKA--EGVSSVYSSTAPKACKVARPGGAPEDSGEWLCPGQGGLVVRVSEM 75 Query: 69 DLREVVSVGRNREAAAREPAAQAWFGPFSSTGDTVEWRA-ASGKPFAIIQRWQIADNSEQ 127 DLR+ VSVGRN + A EPAA A FGPF+ST DTVEWR +GKPFAIIQRW +ADN + Sbjct: 76 DLRQTVSVGRNYKDAKDEPAASASFGPFNSTTDTVEWRLDGAGKPFAIIQRWHLADNDDL 135 Query: 128 DKRGGPVSRAMLAVTRLPPGDVCHVAYVDVAANPDANALARQAADDFARDFKCGTDTVKT 187 K G P ++ ML VTRLPPG VCHVAYVDVAAN +AN +ARQAAD+ AR F CG D + Sbjct: 136 GKGGRPTTKQMLVVTRLPPGPVCHVAYVDVAANRNANEVARQAADELARGFACGKDKPRP 195 Query: 188 IGQSGRTTSL 197 G GR T+L Sbjct: 196 FGTPGRATAL 205 >ref|YP_001993364.1| hypothetical protein Rpal_4393 [Rhodopseudomonas palustris TIE-1] gb|ACF02889.1| conserved hypothetical protein [Rhodopseudomonas palustris TIE-1] Length = 209 Score = 204 bits (519), Expect = 7e-51, Method: Compositional matrix adjust. Identities = 104/178 (58%), Positives = 128/178 (71%), Gaps = 1/178 (0%) Query: 21 AGAETISSSYTSTAPKACRMIGKPSEEDGSTTRVCPGKSGLVVLINEGDLREVVSVGRNR 80 A A+ SS Y+STAPKAC++ G + S +CPG+ GLVV+++E DLR+ VSVGRN Sbjct: 28 AQADGASSVYSSTAPKACKVAGPGGAPEDSGEWLCPGQDGLVVVVSEMDLRQTVSVGRNY 87 Query: 81 EAAAREPAAQAWFGPFSSTGDTVEWRA-ASGKPFAIIQRWQIADNSEQDKRGGPVSRAML 139 + A +PAA+ FGPF+ST DTVEWR +GKPFAIIQRW +ADN + K G P ++ ML Sbjct: 88 KDANAQPAAKTSFGPFNSTTDTVEWRLDGAGKPFAIIQRWHLADNDDLGKGGRPNTKQML 147 Query: 140 AVTRLPPGDVCHVAYVDVAANPDANALARQAADDFARDFKCGTDTVKTIGQSGRTTSL 197 VTRLPPG VCHVAYVDVAAN +AN +ARQAAD+ AR F CG D K G GR T+L Sbjct: 148 VVTRLPPGAVCHVAYVDVAANRNANEVARQAADELARGFACGKDKPKPFGSPGRATTL 205 >ref|NP_949209.1| hypothetical protein RPA3872 [Rhodopseudomonas palustris CGA009] emb|CAE29313.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009] Length = 209 Score = 202 bits (515), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 103/178 (57%), Positives = 128/178 (71%), Gaps = 1/178 (0%) Query: 21 AGAETISSSYTSTAPKACRMIGKPSEEDGSTTRVCPGKSGLVVLINEGDLREVVSVGRNR 80 A A+ SS Y+STAPKAC++ G + S +CPG+ GLVV+++E DLR+ VSVGRN Sbjct: 28 AQADGASSVYSSTAPKACKVAGPGGAPEDSGEWLCPGQDGLVVVVSEMDLRQTVSVGRNY 87 Query: 81 EAAAREPAAQAWFGPFSSTGDTVEWRA-ASGKPFAIIQRWQIADNSEQDKRGGPVSRAML 139 + A +PA++ FGPF+ST DTVEWR +GKPFAIIQRW +ADN + K G P ++ ML Sbjct: 88 KDANAQPASKTSFGPFNSTTDTVEWRLDGAGKPFAIIQRWHLADNDDLGKGGRPNTKQML 147 Query: 140 AVTRLPPGDVCHVAYVDVAANPDANALARQAADDFARDFKCGTDTVKTIGQSGRTTSL 197 VTRLPPG VCHVAYVDVAAN +AN +ARQAAD+ AR F CG D K G GR T+L Sbjct: 148 VVTRLPPGAVCHVAYVDVAANRNANEVARQAADELARGFACGKDKPKPFGSPGRATAL 205