BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0046.0028.p (467 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_772430.1| lignostilbene-alpha,beta-dioxygenase [Bradyrhiz... 820 0.0 ref|YP_001241346.1| putative carotenoid oxygenase [Bradyrhizobiu... 744 0.0 ref|YP_001206924.1| putative carotenoid oxygenase [Bradyrhizobiu... 741 0.0 ref|YP_001990416.1| carotenoid oxygenase [Rhodopseudomonas palus... 719 0.0 ref|YP_004107733.1| carotenoid oxygenase [Rhodopseudomonas palus... 719 0.0 >ref|NP_772430.1| lignostilbene-alpha,beta-dioxygenase [Bradyrhizobium japonicum USDA 110] dbj|BAC51055.1| blr5790 [Bradyrhizobium japonicum USDA 110] Length = 465 Score = 820 bits (2118), Expect = 0.0, Method: Compositional matrix adjust. Identities = 391/456 (85%), Positives = 416/456 (91%), Gaps = 1/456 (0%) Query: 11 RTNLAPIPFEADAPFLKISGELPRDLNGTLYRNGPNPQFEAPGAHWFVGDGMLHAFHLEN 70 R N+APIPFEADAPFLKI GELPR+LNGTLYRNGPNPQF+A GAHWFVGDGMLHAFHLEN Sbjct: 10 RNNIAPIPFEADAPFLKIIGELPRELNGTLYRNGPNPQFDASGAHWFVGDGMLHAFHLEN 69 Query: 71 GRASYRNRWVRTPKWQAEHDAGRALFGGFGRKLPDAPATTTTDGGVANTNIIFHGGRLLA 130 GRASYRNRWVRTPKW AEHDAGRALFGGFGRKLPDAPA T DGGVANTNIIFH G+LLA Sbjct: 70 GRASYRNRWVRTPKWLAEHDAGRALFGGFGRKLPDAPADLT-DGGVANTNIIFHAGKLLA 128 Query: 131 LEEGHLPTEIEPGTLNRLGYCDYKGAISGPFTAHPKIDPVTGEMVFFGYNAAGPLTPALS 190 LEE HLPTEIEPGTL GY +Y+G I+ FTAHPKIDPVTGEM+FFGYNAAGPLTPALS Sbjct: 129 LEEAHLPTEIEPGTLATRGYHNYQGRIASSFTAHPKIDPVTGEMLFFGYNAAGPLTPALS 188 Query: 191 FGAVSSSGVVTRFERFEAPYASMVHDFIVTENHVLFPILPITGSMQRAMRGQAPYAWEPE 250 FG++ + G TRFERFEAPYASMVHDFIVT NHVLFPILPI GSM+RAM G+ PYAWEP+ Sbjct: 189 FGSIDACGKATRFERFEAPYASMVHDFIVTANHVLFPILPIAGSMERAMSGRPPYAWEPD 248 Query: 251 KGAYVGVMKRSGASKDIVWFRAETCYVFHVMNAWEDGNRIIADVMQFEEAPLFNHPDGSP 310 KGAYVGVMKR+G +KDIVWFR E CYVFH+MNAWE+GNRI+ADVMQFEEAPLF HPDG P Sbjct: 249 KGAYVGVMKRNGTAKDIVWFRGEACYVFHIMNAWEEGNRIVADVMQFEEAPLFPHPDGRP 308 Query: 311 TDPRKNRARYCRWTFDLSGNTDRFTQTYLDDLTGEFPRVDDRRAGFASNHGWYACANPDL 370 TDP K+RAR+CRWTFDLSGNTDRF QTYLDDLTGEFPR+DDRRAG S HGWYACANP L Sbjct: 309 TDPEKSRARHCRWTFDLSGNTDRFQQTYLDDLTGEFPRIDDRRAGLKSRHGWYACANPKL 368 Query: 371 PMFGALSGVVHVDGRGKRLGHYLLPAGDTISEPVFVERGADAAEGDGWLLAVVWRARENR 430 PMFGALSG+VHVDG GKRLGHYLLPAGDTISEPVFVER +DAAEGDGWLLAVVWRARENR Sbjct: 369 PMFGALSGIVHVDGNGKRLGHYLLPAGDTISEPVFVERSSDAAEGDGWLLAVVWRARENR 428 Query: 431 SDLAVFNAQDVEAGPTALVHLGHRVPDGFHGNWVGA 466 SDLAVFNA D+EAGP ALV LGHRVPDGFHGNWVGA Sbjct: 429 SDLAVFNATDIEAGPAALVQLGHRVPDGFHGNWVGA 464 >ref|YP_001241346.1| putative carotenoid oxygenase [Bradyrhizobium sp. BTAi1] gb|ABQ37440.1| putative carotenoid oxygenase [Bradyrhizobium sp. BTAi1] Length = 467 Score = 744 bits (1922), Expect = 0.0, Method: Compositional matrix adjust. Identities = 356/457 (77%), Positives = 397/457 (86%), Gaps = 2/457 (0%) Query: 11 RTNLAPIPFEADAPFLKISGELPRDLNGTLYRNGPNPQFEAPGAHWFVGDGMLHAFHLEN 70 R+NLAPIPFE DAPFL+ISGELPR+LNGTLYRNGPNPQF +PGAHWFVGDGMLHAFHLEN Sbjct: 12 RSNLAPIPFECDAPFLEISGELPRELNGTLYRNGPNPQFSSPGAHWFVGDGMLHAFHLEN 71 Query: 71 GRASYRNRWVRTPKWQAEHDAGRALFGGFGRKLPDAPATTTTDGGVANTNIIFHGGRLLA 130 GRASYRNRWVRTPK++AE AGRALFGGFGRKLPDAPA T DGGVANTNII H GRLLA Sbjct: 72 GRASYRNRWVRTPKFEAERRAGRALFGGFGRKLPDAPADVT-DGGVANTNIIAHAGRLLA 130 Query: 131 LEEGHLPTEIEPGTLNRLGYCDYKGAISGPFTAHPKIDPVTGEMVFFGYNAAGPLTPALS 190 LEE HLPTEIEPGTL GY D+ G + G FTAHPK DPV+GE++FFGYNAAGPLTPAL+ Sbjct: 131 LEEAHLPTEIEPGTLATSGYHDFGGRLRGAFTAHPKTDPVSGELLFFGYNAAGPLTPALT 190 Query: 191 FGAVSSSGVVTRFERFEAPYASMVHDFIVTENHVLFPILPITGSMQRAMRGQAPYAWEPE 250 +G V +SG +TR +RF+APYASMVHDF+VT +HVLFPI+P+TGS++RAM G+ PYAWEP+ Sbjct: 191 YGTVDASGRLTRLDRFDAPYASMVHDFVVTADHVLFPIMPLTGSLERAMSGRPPYAWEPD 250 Query: 251 KGAYVGVMKRSGASKDIVWFRAETCYVFHVMNAWEDGNRIIADVMQFEEAPLFNHPDGSP 310 KGAYVG+MKR GA KDIVW+R E CYVFHVMNAWEDG+ IIADVMQF+E PLF HPDG P Sbjct: 251 KGAYVGIMKRGGAVKDIVWYRGEACYVFHVMNAWEDGHHIIADVMQFDEPPLFPHPDGRP 310 Query: 311 TDPRKNRARYCRWTFDLSGNTDRFTQTYLDDLTGEFPRVDDRRAGFASNHGWYACANPDL 370 TDP K+RAR CRW+FDL+G ++RFTQTYLDDLTGEFPR+DDRRAG S HGWYACANPD Sbjct: 311 TDPAKSRARLCRWSFDLAGTSERFTQTYLDDLTGEFPRIDDRRAGLPSRHGWYACANPDG 370 Query: 371 PMFGALSGVVHVDG-RGKRLGHYLLPAGDTISEPVFVERGADAAEGDGWLLAVVWRAREN 429 P+FGALSG+ VDG G R YLLP GD++SEPVFV R ADAAEGDGWLL VVWRA N Sbjct: 371 PLFGALSGLAQVDGAAGTRRATYLLPDGDSLSEPVFVPRRADAAEGDGWLLTVVWRAATN 430 Query: 430 RSDLAVFNAQDVEAGPTALVHLGHRVPDGFHGNWVGA 466 SDLAV NA D+ +GP ALVHLGHRVPDGFHGNWVGA Sbjct: 431 TSDLAVLNATDIASGPVALVHLGHRVPDGFHGNWVGA 467 >ref|YP_001206924.1| putative carotenoid oxygenase [Bradyrhizobium sp. ORS 278] emb|CAL78707.1| putative carotenoid oxygenase [Bradyrhizobium sp. ORS 278] Length = 470 Score = 741 bits (1914), Expect = 0.0, Method: Compositional matrix adjust. Identities = 353/460 (76%), Positives = 395/460 (85%), Gaps = 1/460 (0%) Query: 7 SNAARTNLAPIPFEADAPFLKISGELPRDLNGTLYRNGPNPQFEAPGAHWFVGDGMLHAF 66 + + R NLAPIPFE DAP LKI+GELPR+LNGTLYRNGPNPQF++PGAHWFVGDGMLHAF Sbjct: 11 TRSGRNNLAPIPFECDAPILKITGELPRELNGTLYRNGPNPQFDSPGAHWFVGDGMLHAF 70 Query: 67 HLENGRASYRNRWVRTPKWQAEHDAGRALFGGFGRKLPDAPATTTTDGGVANTNIIFHGG 126 HL+NGRASYRNRWVRTPK++AE AGRALFGGFGRKL DAP + TDGGVANTNII H G Sbjct: 71 HLDNGRASYRNRWVRTPKFEAERKAGRALFGGFGRKLADAP-SDLTDGGVANTNIISHAG 129 Query: 127 RLLALEEGHLPTEIEPGTLNRLGYCDYKGAISGPFTAHPKIDPVTGEMVFFGYNAAGPLT 186 +LLALEE HLPTEIEPGTL GY D+ G + G FTAHPK DPVTGE++FFGYNAAGPLT Sbjct: 130 KLLALEEAHLPTEIEPGTLATKGYQDFGGRLRGAFTAHPKTDPVTGELLFFGYNAAGPLT 189 Query: 187 PALSFGAVSSSGVVTRFERFEAPYASMVHDFIVTENHVLFPILPITGSMQRAMRGQAPYA 246 PAL++G + ++G +TR RFEAPYASMVHDFIVT NHVLFPILP+TGSMQRAM G+ PYA Sbjct: 190 PALTYGTIDAAGQLTRLNRFEAPYASMVHDFIVTANHVLFPILPLTGSMQRAMSGRPPYA 249 Query: 247 WEPEKGAYVGVMKRSGASKDIVWFRAETCYVFHVMNAWEDGNRIIADVMQFEEAPLFNHP 306 WEP+KGAY+GVMKRSG KDIVWFR + CYVFH+MNAW+DG+RI ADVMQF+E PLF HP Sbjct: 250 WEPDKGAYIGVMKRSGDIKDIVWFRGDACYVFHIMNAWDDGHRITADVMQFDEPPLFPHP 309 Query: 307 DGSPTDPRKNRARYCRWTFDLSGNTDRFTQTYLDDLTGEFPRVDDRRAGFASNHGWYACA 366 DG PTDP K+RAR CRW+FDL+GNTDRFTQTYLDDLTGEFPR+DDRRAG AS HGWYACA Sbjct: 310 DGRPTDPVKSRARLCRWSFDLAGNTDRFTQTYLDDLTGEFPRIDDRRAGLASRHGWYACA 369 Query: 367 NPDLPMFGALSGVVHVDGRGKRLGHYLLPAGDTISEPVFVERGADAAEGDGWLLAVVWRA 426 NPD P FGALSG+ HVD G R YLLP GD++SEPVFV R +A EGDGWLL VVWRA Sbjct: 370 NPDGPPFGALSGLAHVDCVGARRATYLLPDGDSLSEPVFVPRSPEAPEGDGWLLTVVWRA 429 Query: 427 RENRSDLAVFNAQDVEAGPTALVHLGHRVPDGFHGNWVGA 466 N S++AVF A ++ AGP ALVHLGHRVPDGFHGNWVGA Sbjct: 430 ETNTSEIAVFGATEIGAGPIALVHLGHRVPDGFHGNWVGA 469 >ref|YP_001990416.1| carotenoid oxygenase [Rhodopseudomonas palustris TIE-1] gb|ACE99940.1| Carotenoid oxygenase [Rhodopseudomonas palustris TIE-1] Length = 467 Score = 719 bits (1856), Expect = 0.0, Method: Compositional matrix adjust. Identities = 340/466 (72%), Positives = 384/466 (82%) Query: 1 MLDQVTSNAARTNLAPIPFEADAPFLKISGELPRDLNGTLYRNGPNPQFEAPGAHWFVGD 60 ML A NLAPIP E DAPFL I GELPR+LNGTLYRNG NPQF +P AHWF GD Sbjct: 1 MLQVTGIPDACDNLAPIPMECDAPFLSIKGELPRELNGTLYRNGANPQFVSPNAHWFFGD 60 Query: 61 GMLHAFHLENGRASYRNRWVRTPKWQAEHDAGRALFGGFGRKLPDAPATTTTDGGVANTN 120 GMLHAFHLENGRASYRNRWVRTPKW AEH+AGR L+G F KLPDAP + DG VANTN Sbjct: 61 GMLHAFHLENGRASYRNRWVRTPKWLAEHEAGRPLYGEFNLKLPDAPRSVPDDGNVANTN 120 Query: 121 IIFHGGRLLALEEGHLPTEIEPGTLNRLGYCDYKGAISGPFTAHPKIDPVTGEMVFFGYN 180 I+FH GRLLALEE HLP +IE TL GYCDY GA+ GPFTAHPKIDPVTGEM+FFGYN Sbjct: 121 IVFHAGRLLALEEAHLPMQIERDTLETRGYCDYGGALKGPFTAHPKIDPVTGEMLFFGYN 180 Query: 181 AAGPLTPALSFGAVSSSGVVTRFERFEAPYASMVHDFIVTENHVLFPILPITGSMQRAMR 240 A+GPLT +SFGA+ +SG VTR E F+AP+A+MVHDFIVTE+HVLFPILP+TGS+ RAMR Sbjct: 181 ASGPLTRTMSFGAIDASGNVTRLEHFKAPFAAMVHDFIVTEHHVLFPILPLTGSIWRAMR 240 Query: 241 GQAPYAWEPEKGAYVGVMKRSGASKDIVWFRAETCYVFHVMNAWEDGNRIIADVMQFEEA 300 G+ PYAW+P KG+YVGVMKRSG+++DI WFR E C+VFHVMNAWEDG RI+ADVMQ EEA Sbjct: 241 GRPPYAWDPRKGSYVGVMKRSGSTRDIRWFRGEACFVFHVMNAWEDGTRIVADVMQSEEA 300 Query: 301 PLFNHPDGSPTDPRKNRARYCRWTFDLSGNTDRFTQTYLDDLTGEFPRVDDRRAGFASNH 360 PLF HPDG TDP K RAR CRW+FDL+GNT+ F ++YLD+++GEFPR+D+RRAG S H Sbjct: 301 PLFTHPDGRRTDPEKGRARLCRWSFDLAGNTNAFKRSYLDEISGEFPRIDERRAGLRSGH 360 Query: 361 GWYACANPDLPMFGALSGVVHVDGRGKRLGHYLLPAGDTISEPVFVERGADAAEGDGWLL 420 GWYACA+P+ PM G L+G+VHVDG G R YLLP GDTI EPVFV R ADA E +GWLL Sbjct: 361 GWYACASPETPMLGMLTGLVHVDGNGHRRTRYLLPTGDTIGEPVFVPRAADANEAEGWLL 420 Query: 421 AVVWRARENRSDLAVFNAQDVEAGPTALVHLGHRVPDGFHGNWVGA 466 AVVWR ENRSDLAVFNA D+ AGP ALVHLGHR+PDGFHGNWV A Sbjct: 421 AVVWRGCENRSDLAVFNATDIAAGPIALVHLGHRIPDGFHGNWVPA 466 >ref|YP_004107733.1| carotenoid oxygenase [Rhodopseudomonas palustris DX-1] gb|ADU43000.1| Carotenoid oxygenase [Rhodopseudomonas palustris DX-1] Length = 467 Score = 719 bits (1855), Expect = 0.0, Method: Compositional matrix adjust. Identities = 339/466 (72%), Positives = 381/466 (81%) Query: 1 MLDQVTSNAARTNLAPIPFEADAPFLKISGELPRDLNGTLYRNGPNPQFEAPGAHWFVGD 60 ML A NLAPIP E DAPFL + GELPR+LNGTLYRNG NPQF +P AHWF GD Sbjct: 1 MLQVTGIPDACDNLAPIPMECDAPFLTVKGELPRELNGTLYRNGANPQFVSPNAHWFFGD 60 Query: 61 GMLHAFHLENGRASYRNRWVRTPKWQAEHDAGRALFGGFGRKLPDAPATTTTDGGVANTN 120 GMLHAF LENGRASYRNRWVRTPKW AEH+AGR L+G F KLPDAP + DG VANTN Sbjct: 61 GMLHAFRLENGRASYRNRWVRTPKWLAEHEAGRPLYGEFNLKLPDAPRSVPEDGNVANTN 120 Query: 121 IIFHGGRLLALEEGHLPTEIEPGTLNRLGYCDYKGAISGPFTAHPKIDPVTGEMVFFGYN 180 I+FH G+LLALEE HLP +IEPGTL GYCDY GA+ GPFTAHPK DPVTGEM+FFGYN Sbjct: 121 IVFHAGKLLALEEAHLPMQIEPGTLETRGYCDYGGALKGPFTAHPKFDPVTGEMLFFGYN 180 Query: 181 AAGPLTPALSFGAVSSSGVVTRFERFEAPYASMVHDFIVTENHVLFPILPITGSMQRAMR 240 A GPLT +SFGAV ++G VTR E F+APYA+MVHDFIVTE++VLFPILP+TGS+ RAMR Sbjct: 181 AGGPLTRTMSFGAVDAAGCVTRLEHFKAPYAAMVHDFIVTEHYVLFPILPLTGSIWRAMR 240 Query: 241 GQAPYAWEPEKGAYVGVMKRSGASKDIVWFRAETCYVFHVMNAWEDGNRIIADVMQFEEA 300 G+ PYAW+P KG+ VGVMKRSG+++DI WFR E C+VFHVMNAWEDG RI+ADVMQ EEA Sbjct: 241 GRPPYAWDPRKGSCVGVMKRSGSTRDIRWFRGEACFVFHVMNAWEDGTRIVADVMQSEEA 300 Query: 301 PLFNHPDGSPTDPRKNRARYCRWTFDLSGNTDRFTQTYLDDLTGEFPRVDDRRAGFASNH 360 PLF HPDG TDP K RAR CRW FDL+GNT+ F ++YLDD++GEFPR+D+RRAG S H Sbjct: 301 PLFTHPDGRRTDPEKGRARLCRWNFDLAGNTNAFKRSYLDDISGEFPRIDERRAGLRSGH 360 Query: 361 GWYACANPDLPMFGALSGVVHVDGRGKRLGHYLLPAGDTISEPVFVERGADAAEGDGWLL 420 GWYACA+P+ PM G L+G+VHVDG G R YLLP GDTI EPVFV R ADAAE DGWLL Sbjct: 361 GWYACASPETPMLGMLTGLVHVDGNGHRRARYLLPTGDTIGEPVFVPRTADAAEADGWLL 420 Query: 421 AVVWRARENRSDLAVFNAQDVEAGPTALVHLGHRVPDGFHGNWVGA 466 AVVWR ENRSDLAVFNA D+ AGP ALV LGHR+PDGFHGNWV A Sbjct: 421 AVVWRGCENRSDLAVFNASDIAAGPIALVQLGHRIPDGFHGNWVAA 466