BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0046.0023.p (223 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001241350.1| hypothetical protein BBta_5481 [Bradyrhizobi... 289 3e-76 ref|YP_568846.1| hypothetical protein RPD_1709 [Rhodopseudomonas... 234 1e-59 ref|YP_001206929.1| hypothetical protein BRADO5014 [Bradyrhizobi... 231 8e-59 ref|YP_780501.1| hypothetical protein RPE_1572 [Rhodopseudomonas... 221 8e-56 ref|NP_770670.1| hypothetical protein blr4030 [Bradyrhizobium ja... 129 2e-28 >ref|YP_001241350.1| hypothetical protein BBta_5481 [Bradyrhizobium sp. BTAi1] gb|ABQ37444.1| hypothetical protein BBta_5481 [Bradyrhizobium sp. BTAi1] Length = 222 Score = 289 bits (739), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 150/221 (67%), Positives = 169/221 (76%), Gaps = 2/221 (0%) Query: 4 VGLDGFSRGWVAVTVDGDRRSISFHTDITDALSRPFDRAGIDIPIGMTDDGERDCDLLAR 63 +GLDGF GWVAV +DG+ R+I F D+ AL+ PF RA IDIPIGM DDG R CDLLAR Sbjct: 3 LGLDGFRNGWVAVRIDGECRAIEFRPDVAGALAAPFVRAAIDIPIGMRDDGARACDLLAR 62 Query: 64 ARLRPHNSRVFTGARRWLWQQFDDPDLANAEAVRCGQSRVSRQLWHLGKKIMEVDAFVRA 123 RL PH SRVFTGARRWLW+ + DPD ANAEA R GQ+R SRQLWHLG+KIMEVDAFVR Sbjct: 63 DRLAPHRSRVFTGARRWLWEDYTDPDQANAEASRRGQTRASRQLWHLGRKIMEVDAFVRG 122 Query: 124 NATRDIREVHPELVFLRLNRGEPLPRKKSEEGDALRRRLLKQSGFREIDRWLTQMRIGTG 183 + DIRE HPE+VFLRL+ G PLP KK+ EG LRR LL GF +ID W+++ IGTG Sbjct: 123 HRELDIREAHPEMVFLRLH-GAPLPPKKTHEGARLRRDLLFADGFHDIDEWVSRAHIGTG 181 Query: 184 AKRDDVLDACAVALAAREPCGSVPEA-ASRDAHGLPMQIWF 223 AK DDVLDACAVALAAR+ G VPE DAHGLPMQIWF Sbjct: 182 AKADDVLDACAVALAARDCAGCVPEGDPPCDAHGLPMQIWF 222 >ref|YP_568846.1| hypothetical protein RPD_1709 [Rhodopseudomonas palustris BisB5] gb|ABE38945.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5] Length = 227 Score = 234 bits (596), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 143/227 (62%), Positives = 166/227 (73%), Gaps = 4/227 (1%) Query: 1 LIAVGLDGFSRGWVAVTVDGDRRSISFHTDITDALSRPFDRAGIDIPIGMTDDGERDCDL 60 +IAVGLDG+ GWVAVT+DGDR +I F DI+ ++ F RA IDIPIG+ DDG R CDL Sbjct: 1 MIAVGLDGYRHGWVAVTLDGDRHAIDFIPDISWLATQRFTRAAIDIPIGLRDDGTRACDL 60 Query: 61 LARARLRPHNSRVFTGARRWLWQQFDDPD---LANAEAVRCGQSRVSRQLWHLGKKIMEV 117 ARA LRPH+SRVFTGARRWLW +F PD ANA AV GQ RVS QLWHLG KIM+V Sbjct: 61 EARALLRPHSSRVFTGARRWLWTEFRYPDQFAQANAAAVARGQPRVSLQLWHLGPKIMQV 120 Query: 118 DAFVRANATRDIREVHPELVFLRLNRGEPLPRKKSEEGDALRRRLLKQSGFREIDRWLTQ 177 D+FVRA+ DIRE HPELVF RLN +PLP K++ EG LRR LL G +ID+W+ + Sbjct: 121 DSFVRAHHALDIRETHPELVFRRLNDDQPLPPKRTAEGLRLRRDLLSGQGIDQIDQWVDR 180 Query: 178 MRIGTGAKRDDVLDACAVALAAREPCGSVPEA-ASRDAHGLPMQIWF 223 RIG GAK DDVLDACA ALAAR+ VP A A D HGLPM+IW+ Sbjct: 181 ARIGRGAKADDVLDACACALAARDSDACVPSAEAPLDDHGLPMRIWY 227 >ref|YP_001206929.1| hypothetical protein BRADO5014 [Bradyrhizobium sp. ORS 278] emb|CAL78712.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278] Length = 174 Score = 231 bits (588), Expect = 8e-59, Method: Compositional matrix adjust. Identities = 121/175 (69%), Positives = 135/175 (77%), Gaps = 2/175 (1%) Query: 50 MTDDGERDCDLLARARLRPHNSRVFTGARRWLWQQFDDPDLANAEAVRCGQSRVSRQLWH 109 MTD+G R CD LAR +L PH SRVFTGARRWLW+ + DPD ANAEA R GQ R SRQLWH Sbjct: 1 MTDNGNRACDTLARDKLAPHRSRVFTGARRWLWENYTDPDDANAEATRRGQPRASRQLWH 60 Query: 110 LGKKIMEVDAFVRANATRDIREVHPELVFLRLNRGEPLPRKKSEEGDALRRRLLKQSGFR 169 LG+KIMEVDAFVRA+ RDIRE HPELVFLRLN G LP KK+E+G LRR LL +GF Sbjct: 61 LGRKIMEVDAFVRAHRDRDIREAHPELVFLRLN-GTSLPSKKTEQGARLRRDLLVAAGFS 119 Query: 170 EIDRWLTQMRIGTGAKRDDVLDACAVALAAREPCGSVPEAAS-RDAHGLPMQIWF 223 +ID WLT+ R GTGAK DDVLDACAVALAAR+ G PE RD + +PMQIWF Sbjct: 120 DIDDWLTRARRGTGAKPDDVLDACAVALAARDCAGCAPEGEPLRDDYHVPMQIWF 174 >ref|YP_780501.1| hypothetical protein RPE_1572 [Rhodopseudomonas palustris BisA53] gb|ABJ05521.1| conserved hypothetical protein [Rhodopseudomonas palustris BisA53] Length = 227 Score = 221 bits (562), Expect = 8e-56, Method: Compositional matrix adjust. Identities = 138/227 (60%), Positives = 155/227 (68%), Gaps = 4/227 (1%) Query: 1 LIAVGLDGFSRGWVAVTVDGDRRSISFHTDITDALSRPFDRAGIDIPIGMTDDGERDCDL 60 +IAVGLDGF GWVAVT+DG R I F I ++ F RA IDIPIG+++DG R CD Sbjct: 1 MIAVGLDGFRHGWVAVTLDGGRHGIDFIDSICWLATQRFTRAAIDIPIGLSEDGVRACDR 60 Query: 61 LARARLRPHNSRVFTGARRWLWQQFDDPD---LANAEAVRCGQSRVSRQLWHLGKKIMEV 117 ARA LRPH SRVFTGARRWLWQ+F PD ANA A Q++ S QLWHLG KI+EV Sbjct: 61 EARALLRPHASRVFTGARRWLWQEFRYPDDYAKANAAAAARRQAKASLQLWHLGPKIIEV 120 Query: 118 DAFVRANATRDIREVHPELVFLRLNRGEPLPRKKSEEGDALRRRLLKQSGFREIDRWLTQ 177 D FVR + D+RE HPELVF RLN PLP K+S EG ALRR L+ G EID WL Sbjct: 121 DDFVRTHRDLDLRETHPELVFWRLNGERPLPSKRSAEGVALRRERLRGQGIGEIDEWLNT 180 Query: 178 MRIGTGAKRDDVLDACAVALAAREPCGSVPEA-ASRDAHGLPMQIWF 223 RIGTGA+ DDVLDACA ALAAR VP RD HGLPMQIW+ Sbjct: 181 ARIGTGARADDVLDACACALAARSSDKCVPRGEPPRDDHGLPMQIWY 227 >ref|NP_770670.1| hypothetical protein blr4030 [Bradyrhizobium japonicum USDA 110] dbj|BAC49295.1| blr4030 [Bradyrhizobium japonicum USDA 110] Length = 221 Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 96/222 (43%), Positives = 122/222 (54%), Gaps = 11/222 (4%) Query: 4 VGLDGFSRGWVAVTVD--GDRRSISFHTDITDALSRPFDRAGIDIPIGMTDDGERDCDLL 61 +GLDGF GWVA +D GD + +T L+ P RA ID+PIG+ G R CDL Sbjct: 5 LGLDGFRYGWVAAWIDERGDH-GFDYSPGLTRLLAMPHARAMIDMPIGLNVSGYRTCDLR 63 Query: 62 ARARLRPHNSRVFTGARRWLWQQFDDPDLANAEAVRC-GQSR-VSRQLWHLGKKIMEVDA 119 AR + P VF GARR LW+ F D AN G+ R VS QLW++ KI +VD Sbjct: 64 ARELVGPA---VFLGARRDLWR-FPDMAAANRHYWEHEGKGRGVSAQLWNIRDKIRDVDE 119 Query: 120 FVRANATRDIREVHPELVFLRLNRGEPLPRKKSEEGDALRRRLLKQSGFREIDRWLTQMR 179 + I E HPEL+F L L K S +G R LL+Q GF + +WLTQ R Sbjct: 120 IMTPARQATIGEAHPELIFWNLAGRLRLESKGSAQGREQRIALLEQRGFTRLRKWLTQ-R 178 Query: 180 IGTGAKRDDVLDACAVALAAREPCGSVPEAASRDAHGLPMQI 221 GTG RDD++DACA A+AAR+ SV + D GL ++I Sbjct: 179 HGTGIGRDDLIDACACAVAARDSTQSVGDGEI-DPRGLRVEI 219