BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0046.0022.p (555 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001241352.1| fumarase [Bradyrhizobium sp. BTAi1] >gi|1464... 1077 0.0 ref|NP_772436.1| fumarate hydratase class I [Bradyrhizobium japo... 1075 0.0 ref|YP_001206931.1| fumarase A [Bradyrhizobium sp. ORS 278] >gi|... 1065 0.0 ref|YP_487367.1| fumarate hydratase, class I [Rhodopseudomonas p... 1051 0.0 ref|YP_531414.1| tartrate/fumarate subfamily Fe-S type hydro-lya... 1040 0.0 >ref|YP_001241352.1| fumarase [Bradyrhizobium sp. BTAi1] gb|ABQ37446.1| fumarase [Bradyrhizobium sp. BTAi1] Length = 551 Score = 1077 bits (2784), Expect = 0.0, Method: Compositional matrix adjust. Identities = 520/555 (93%), Positives = 539/555 (97%), Gaps = 4/555 (0%) Query: 1 MNAPSAFPDQQKPVPPYKHTPLFPLGADTTPYKKVTSEGVRVEKVLGKDMLVVSREALRA 60 MNAP+AFPDQ KPVPPYKHTPLFPLG DTTPYKK+TSEGVRVEKVLG+DMLVVSREALRA Sbjct: 1 MNAPTAFPDQSKPVPPYKHTPLFPLGPDTTPYKKITSEGVRVEKVLGRDMLVVSREALRA 60 Query: 61 LSEAAFGDINHYLRPGHLKQLRSILEDKEASDNDKFVAFDFLKNANIAAGGVLPMCQDTG 120 LSEAAFG+INH+LRPGHLKQLRSILED EAS NDKFVA DFLKNANI+AGGVLPMCQDTG Sbjct: 61 LSEAAFGEINHFLRPGHLKQLRSILEDPEASPNDKFVALDFLKNANISAGGVLPMCQDTG 120 Query: 121 TAIIMGKKGCNVITDGDDEAALSEGARDAYLRRNLRYSQVAPLSMYEEKNTANNMPAQCE 180 TAIIMGKKGCNVITDGDDEAALSEGARDAYLRRNLRYSQVAPLSMYEEKNTANNMPAQ E Sbjct: 121 TAIIMGKKGCNVITDGDDEAALSEGARDAYLRRNLRYSQVAPLSMYEEKNTANNMPAQTE 180 Query: 181 IYAEGQGDSAGAYKFMFMAKGGGSANKSFLFQATPSVLTRDRLLAFLKEKVLTLGTAACP 240 IYAEG+ AYKFMFMAKGGGSANKSFLFQATPSVLT+DRLLAFLKEKVLTLGTAACP Sbjct: 181 IYAEGED----AYKFMFMAKGGGSANKSFLFQATPSVLTKDRLLAFLKEKVLTLGTAACP 236 Query: 241 PYHLAIVIGGTSAELCMKTVKLASARYLDALPTHGSADGNAFRDLEMEQEILKMTQSLGV 300 PYHLAIVIGGTSAELCMKTVKLASARYLDALPT GSADGNAFRDLEMEQEI KMTQSLGV Sbjct: 237 PYHLAIVIGGTSAELCMKTVKLASARYLDALPTQGSADGNAFRDLEMEQEIHKMTQSLGV 296 Query: 301 GAQFGGKYFCHDVRVIRMPRHGASLPIGLGVSCSADRQVLGKITRDGVYLEELEHNPAQY 360 GAQFGGKYFCHDVRVIRMPRHGASLPIGLGVSCSADRQVLGKIT+DGVYLEELEH+PAQY Sbjct: 297 GAQFGGKYFCHDVRVIRMPRHGASLPIGLGVSCSADRQVLGKITKDGVYLEELEHHPAQY 356 Query: 361 LPAVEQSLGGEVVKIDLNKPMKEILATLSQYPIKTRVSMTGTMIVARDSAHAKLRERLEK 420 LP VEQ+LGGEVVKIDLN+PMK+ILATLS+ PIKTR+S+TGTMIVARD+AHAKLRERL++ Sbjct: 357 LPEVEQALGGEVVKIDLNQPMKDILATLSKNPIKTRLSLTGTMIVARDAAHAKLRERLDR 416 Query: 421 GEPLPDYFKNHPVYYAGPAKTPDGYASGAFGPTTAGRMDSFVDQFQAAGGSMVMVAKGNR 480 GEPLPDYFKNHPVYYAGPAKTPDGYASGAFGPTTAGRMDSFVDQFQAAGGSMVMVAKGNR Sbjct: 417 GEPLPDYFKNHPVYYAGPAKTPDGYASGAFGPTTAGRMDSFVDQFQAAGGSMVMVAKGNR 476 Query: 481 AVAVREACKKHGGFYLGSIGGAAANLAEHCIKKVEVVEYPELGMEAIWRIEVVDFPAFII 540 A AVREACKKHGGFYLGSIGGAAANLAEHCIKKVEVVEYPELGMEAIWRIEVVDFPAFII Sbjct: 477 APAVREACKKHGGFYLGSIGGAAANLAEHCIKKVEVVEYPELGMEAIWRIEVVDFPAFII 536 Query: 541 IDDKGNDFFKELNLG 555 IDDKGNDFFKELNLG Sbjct: 537 IDDKGNDFFKELNLG 551 >ref|NP_772436.1| fumarate hydratase class I [Bradyrhizobium japonicum USDA 110] dbj|BAC51061.1| Fumarate hydratase class I [Bradyrhizobium japonicum USDA 110] Length = 551 Score = 1075 bits (2780), Expect = 0.0, Method: Compositional matrix adjust. Identities = 520/555 (93%), Positives = 537/555 (96%), Gaps = 4/555 (0%) Query: 1 MNAPSAFPDQQKPVPPYKHTPLFPLGADTTPYKKVTSEGVRVEKVLGKDMLVVSREALRA 60 MNAP+AFPD KPVPPYKHTPLFPLG D TPYKK++SEGVRVEKVLGKDMLVVSREALRA Sbjct: 1 MNAPTAFPDPAKPVPPYKHTPLFPLGKDETPYKKISSEGVRVEKVLGKDMLVVSREALRA 60 Query: 61 LSEAAFGDINHYLRPGHLKQLRSILEDKEASDNDKFVAFDFLKNANIAAGGVLPMCQDTG 120 LSEAAFGDINHYLRPGHLKQLR+ILED EAS NDKFVA DFLKNANIAAGGVLPMCQDTG Sbjct: 61 LSEAAFGDINHYLRPGHLKQLRAILEDGEASPNDKFVALDFLKNANIAAGGVLPMCQDTG 120 Query: 121 TAIIMGKKGCNVITDGDDEAALSEGARDAYLRRNLRYSQVAPLSMYEEKNTANNMPAQCE 180 TAIIMGKKGCNVITDGDDEAALSEGARDAYLRRNLRYSQVAPLSMYEEKNTANNMPAQCE Sbjct: 121 TAIIMGKKGCNVITDGDDEAALSEGARDAYLRRNLRYSQVAPLSMYEEKNTANNMPAQCE 180 Query: 181 IYAEGQGDSAGAYKFMFMAKGGGSANKSFLFQATPSVLTRDRLLAFLKEKVLTLGTAACP 240 IYAEG AYKFMFMAKGGGSANKSFLFQATPSVLT+DRLLAFLKEK+LTLGTAACP Sbjct: 181 IYAEGDD----AYKFMFMAKGGGSANKSFLFQATPSVLTKDRLLAFLKEKILTLGTAACP 236 Query: 241 PYHLAIVIGGTSAELCMKTVKLASARYLDALPTHGSADGNAFRDLEMEQEILKMTQSLGV 300 PYHLAIVIGGTSAELCMKTVKLASARYLDALPTHGS DGNAFRD+EME+EI KMTQSLGV Sbjct: 237 PYHLAIVIGGTSAELCMKTVKLASARYLDALPTHGSPDGNAFRDVEMEKEIHKMTQSLGV 296 Query: 301 GAQFGGKYFCHDVRVIRMPRHGASLPIGLGVSCSADRQVLGKITRDGVYLEELEHNPAQY 360 GAQFGGKYFCHDVRVIRMPRHGASLPIGLGVSCSADRQVLGKITRDGVYLEELEHNPAQY Sbjct: 297 GAQFGGKYFCHDVRVIRMPRHGASLPIGLGVSCSADRQVLGKITRDGVYLEELEHNPAQY 356 Query: 361 LPAVEQSLGGEVVKIDLNKPMKEILATLSQYPIKTRVSMTGTMIVARDSAHAKLRERLEK 420 LP VE++LGGEVVKIDLN+PMK+ILAT S++PIKTRVSMTGTMIVARDSAHAKLRERLEK Sbjct: 357 LPQVEEALGGEVVKIDLNQPMKDILATFSKHPIKTRVSMTGTMIVARDSAHAKLRERLEK 416 Query: 421 GEPLPDYFKNHPVYYAGPAKTPDGYASGAFGPTTAGRMDSFVDQFQAAGGSMVMVAKGNR 480 GEPLPDYFKNHPVYYAGPAKTP+GYASGAFGPTTAGRMDSFVDQFQAAGGSMVMVAKGNR Sbjct: 417 GEPLPDYFKNHPVYYAGPAKTPEGYASGAFGPTTAGRMDSFVDQFQAAGGSMVMVAKGNR 476 Query: 481 AVAVREACKKHGGFYLGSIGGAAANLAEHCIKKVEVVEYPELGMEAIWRIEVVDFPAFII 540 A AVREACKK+GGFYLGSIGGAAANLAEHCIKKVEV+EYPELGMEAIWRIEVVDFPAFII Sbjct: 477 APAVREACKKYGGFYLGSIGGAAANLAEHCIKKVEVLEYPELGMEAIWRIEVVDFPAFII 536 Query: 541 IDDKGNDFFKELNLG 555 IDDKGNDFFKELNLG Sbjct: 537 IDDKGNDFFKELNLG 551 >ref|YP_001206931.1| fumarase A [Bradyrhizobium sp. ORS 278] emb|CAL78714.1| fumarase A (fumarate hydratase class I) [Bradyrhizobium sp. ORS 278] Length = 551 Score = 1065 bits (2754), Expect = 0.0, Method: Compositional matrix adjust. Identities = 511/555 (92%), Positives = 536/555 (96%), Gaps = 4/555 (0%) Query: 1 MNAPSAFPDQQKPVPPYKHTPLFPLGADTTPYKKVTSEGVRVEKVLGKDMLVVSREALRA 60 MNAP+AFPDQ KPVPPYKHTPLFPLG DTTPYKK+T+EG+RVEKVLG+DMLVVSREALR Sbjct: 1 MNAPTAFPDQSKPVPPYKHTPLFPLGPDTTPYKKITTEGIRVEKVLGRDMLVVSREALRT 60 Query: 61 LSEAAFGDINHYLRPGHLKQLRSILEDKEASDNDKFVAFDFLKNANIAAGGVLPMCQDTG 120 LSEAAFG+INH+LRP HLKQLR ILED EAS NDKFVA DFLKNANI+AGGVLPMCQDTG Sbjct: 61 LSEAAFGEINHFLRPSHLKQLRGILEDPEASPNDKFVALDFLKNANISAGGVLPMCQDTG 120 Query: 121 TAIIMGKKGCNVITDGDDEAALSEGARDAYLRRNLRYSQVAPLSMYEEKNTANNMPAQCE 180 TAIIMGKKGCNVITDGDDEAALSEGARDAYLRRNLRYSQVAPLSMYEEKNTANNMPAQ E Sbjct: 121 TAIIMGKKGCNVITDGDDEAALSEGARDAYLRRNLRYSQVAPLSMYEEKNTANNMPAQTE 180 Query: 181 IYAEGQGDSAGAYKFMFMAKGGGSANKSFLFQATPSVLTRDRLLAFLKEKVLTLGTAACP 240 IYAEG+ AYKFMFMAKGGGSANKSFLFQATPSVLT+DRLLAFLKEK+LTLGTAACP Sbjct: 181 IYAEGED----AYKFMFMAKGGGSANKSFLFQATPSVLTKDRLLAFLKEKILTLGTAACP 236 Query: 241 PYHLAIVIGGTSAELCMKTVKLASARYLDALPTHGSADGNAFRDLEMEQEILKMTQSLGV 300 PYHLAIVIGGTSAELCMKTVKLASARYLDALPTHGSADGNAFRD+EMEQEI KMTQSLGV Sbjct: 237 PYHLAIVIGGTSAELCMKTVKLASARYLDALPTHGSADGNAFRDVEMEQEIHKMTQSLGV 296 Query: 301 GAQFGGKYFCHDVRVIRMPRHGASLPIGLGVSCSADRQVLGKITRDGVYLEELEHNPAQY 360 GAQFGGKYFCHDVRVIRMPRHGASLPIGLGVSCSADRQVLGKIT+DGVYLEELEH+PAQY Sbjct: 297 GAQFGGKYFCHDVRVIRMPRHGASLPIGLGVSCSADRQVLGKITKDGVYLEELEHHPAQY 356 Query: 361 LPAVEQSLGGEVVKIDLNKPMKEILATLSQYPIKTRVSMTGTMIVARDSAHAKLRERLEK 420 LP VEQ+LGGEVVKIDLN+PM++ILATLS+ PIKTR+S+TGTMIVARD+AHAKLRERL++ Sbjct: 357 LPEVEQALGGEVVKIDLNQPMQDILATLSKNPIKTRLSLTGTMIVARDAAHAKLRERLDR 416 Query: 421 GEPLPDYFKNHPVYYAGPAKTPDGYASGAFGPTTAGRMDSFVDQFQAAGGSMVMVAKGNR 480 GEPLPDYFKNHPVYYAGPAKTP+GYASGAFGPTTAGRMDSFVDQFQAAGGSMVMVAKGNR Sbjct: 417 GEPLPDYFKNHPVYYAGPAKTPEGYASGAFGPTTAGRMDSFVDQFQAAGGSMVMVAKGNR 476 Query: 481 AVAVREACKKHGGFYLGSIGGAAANLAEHCIKKVEVVEYPELGMEAIWRIEVVDFPAFII 540 A AVREACK HGGFYLGSIGGAAANLAEHCIKKVEVVEYPELGMEAIWRIEVVDFPAFII Sbjct: 477 APAVREACKTHGGFYLGSIGGAAANLAEHCIKKVEVVEYPELGMEAIWRIEVVDFPAFII 536 Query: 541 IDDKGNDFFKELNLG 555 IDDKGNDFFKELNLG Sbjct: 537 IDDKGNDFFKELNLG 551 >ref|YP_487367.1| fumarate hydratase, class I [Rhodopseudomonas palustris HaA2] gb|ABD08456.1| fumarase [Rhodopseudomonas palustris HaA2] Length = 555 Score = 1051 bits (2719), Expect = 0.0, Method: Compositional matrix adjust. Identities = 502/555 (90%), Positives = 529/555 (95%) Query: 1 MNAPSAFPDQQKPVPPYKHTPLFPLGADTTPYKKVTSEGVRVEKVLGKDMLVVSREALRA 60 MNAP+ P PVPPY HTPLFPLG D TPY+K+TSEGVRVE VLG+DMLVV REALRA Sbjct: 1 MNAPTPIPSAATPVPPYTHTPLFPLGKDETPYRKITSEGVRVETVLGRDMLVVEREALRA 60 Query: 61 LSEAAFGDINHYLRPGHLKQLRSILEDKEASDNDKFVAFDFLKNANIAAGGVLPMCQDTG 120 LSEAAFGDINHYLRPGHL QLR IL+D EAS NDKFVA DFLKNANIAAGGVLPMCQDTG Sbjct: 61 LSEAAFGDINHYLRPGHLAQLRKILDDPEASPNDKFVALDFLKNANIAAGGVLPMCQDTG 120 Query: 121 TAIIMGKKGCNVITDGDDEAALSEGARDAYLRRNLRYSQVAPLSMYEEKNTANNMPAQCE 180 TAIIMGKKGCNVITDG DEAALSEGARDAYLRRNLRYSQVAPL+MYEEKNTANNMPAQCE Sbjct: 121 TAIIMGKKGCNVITDGSDEAALSEGARDAYLRRNLRYSQVAPLTMYEEKNTANNMPAQCE 180 Query: 181 IYAEGQGDSAGAYKFMFMAKGGGSANKSFLFQATPSVLTRDRLLAFLKEKVLTLGTAACP 240 IYAEGQGDSA AYKFMFMAKGGGSANKSFLFQATPSVLTRDRLLAFLKEK++TLGTAACP Sbjct: 181 IYAEGQGDSAAAYKFMFMAKGGGSANKSFLFQATPSVLTRDRLLAFLKEKIMTLGTAACP 240 Query: 241 PYHLAIVIGGTSAELCMKTVKLASARYLDALPTHGSADGNAFRDLEMEQEILKMTQSLGV 300 PYHLAIVIGGTS E MKTVKLASARYLDALPT GS GNAFRDLEMEQEILKMTQSLGV Sbjct: 241 PYHLAIVIGGTSVESTMKTVKLASARYLDALPTQGSEFGNAFRDLEMEQEILKMTQSLGV 300 Query: 301 GAQFGGKYFCHDVRVIRMPRHGASLPIGLGVSCSADRQVLGKITRDGVYLEELEHNPAQY 360 GAQFGGKYFCHDVRVIR+PRHGASLPIGLGVSCSADRQVLGKIT+DGVYLEELEH+PAQY Sbjct: 301 GAQFGGKYFCHDVRVIRLPRHGASLPIGLGVSCSADRQVLGKITKDGVYLEELEHHPAQY 360 Query: 361 LPAVEQSLGGEVVKIDLNKPMKEILATLSQYPIKTRVSMTGTMIVARDSAHAKLRERLEK 420 LP VEQ+LGGEVV+IDLN+PM++ILATLS++PIKTR+S+TGTMIVARD+AHAKLRERL+K Sbjct: 361 LPEVEQALGGEVVQIDLNQPMQDILATLSEHPIKTRLSLTGTMIVARDAAHAKLRERLDK 420 Query: 421 GEPLPDYFKNHPVYYAGPAKTPDGYASGAFGPTTAGRMDSFVDQFQAAGGSMVMVAKGNR 480 GEPLPDYFKNHPVYYAGPAKTPDGYASGAFGPTTAGRMDSFVDQFQAAGGSMVMVAKGNR Sbjct: 421 GEPLPDYFKNHPVYYAGPAKTPDGYASGAFGPTTAGRMDSFVDQFQAAGGSMVMVAKGNR 480 Query: 481 AVAVREACKKHGGFYLGSIGGAAANLAEHCIKKVEVVEYPELGMEAIWRIEVVDFPAFII 540 A AVREACKK+GGFYLGSIGGAAANLAEHCIKKVEV+EYPELGMEAIW+I+VVDFPAFII Sbjct: 481 APAVREACKKYGGFYLGSIGGAAANLAEHCIKKVEVLEYPELGMEAIWKIDVVDFPAFII 540 Query: 541 IDDKGNDFFKELNLG 555 +DDKGNDFFKELNLG Sbjct: 541 VDDKGNDFFKELNLG 555 >ref|YP_531414.1| tartrate/fumarate subfamily Fe-S type hydro-lyase beta subunit [Rhodopseudomonas palustris BisB18] gb|ABD87095.1| fumarase [Rhodopseudomonas palustris BisB18] Length = 551 Score = 1040 bits (2689), Expect = 0.0, Method: Compositional matrix adjust. Identities = 500/555 (90%), Positives = 526/555 (94%), Gaps = 4/555 (0%) Query: 1 MNAPSAFPDQQKPVPPYKHTPLFPLGADTTPYKKVTSEGVRVEKVLGKDMLVVSREALRA 60 MNAP+ P PVPPYKHTPLFPLG D TPY+K+TSEGVRVE VLG+ MLVV REALRA Sbjct: 1 MNAPTPIPSAATPVPPYKHTPLFPLGKDETPYRKITSEGVRVETVLGRAMLVVEREALRA 60 Query: 61 LSEAAFGDINHYLRPGHLKQLRSILEDKEASDNDKFVAFDFLKNANIAAGGVLPMCQDTG 120 LSEAAFGDINHYLRP HL+QLR+IL+D +AS NDKFVA DFLKNANIAAGGVLPMCQDTG Sbjct: 61 LSEAAFGDINHYLRPQHLQQLRNILDDNDASPNDKFVALDFLKNANIAAGGVLPMCQDTG 120 Query: 121 TAIIMGKKGCNVITDGDDEAALSEGARDAYLRRNLRYSQVAPLSMYEEKNTANNMPAQCE 180 TAIIMGKKG NVITDG DEAALSEGARDAYLRRNLRYSQVAPLSMYEEKNTANNMPAQCE Sbjct: 121 TAIIMGKKGFNVITDGSDEAALSEGARDAYLRRNLRYSQVAPLSMYEEKNTANNMPAQCE 180 Query: 181 IYAEGQGDSAGAYKFMFMAKGGGSANKSFLFQATPSVLTRDRLLAFLKEKVLTLGTAACP 240 IYAEG AYKFMFMAKGGGSANKSFLFQATPSVLT+DRLLAFLKEKVLTLGTAACP Sbjct: 181 IYAEGDD----AYKFMFMAKGGGSANKSFLFQATPSVLTKDRLLAFLKEKVLTLGTAACP 236 Query: 241 PYHLAIVIGGTSAELCMKTVKLASARYLDALPTHGSADGNAFRDLEMEQEILKMTQSLGV 300 PYHLAIVIGGTSAELCMKTVKLASA+YLDALPTHGS +GN FRDLEMEQEILKMTQSLGV Sbjct: 237 PYHLAIVIGGTSAELCMKTVKLASAKYLDALPTHGSENGNGFRDLEMEQEILKMTQSLGV 296 Query: 301 GAQFGGKYFCHDVRVIRMPRHGASLPIGLGVSCSADRQVLGKITRDGVYLEELEHNPAQY 360 GAQFGGKYFCHDVRVIR+PRHGASLPIGLGVSCSADRQVLGKIT+DGVYLEELEHNPA++ Sbjct: 297 GAQFGGKYFCHDVRVIRLPRHGASLPIGLGVSCSADRQVLGKITKDGVYLEELEHNPARF 356 Query: 361 LPAVEQSLGGEVVKIDLNKPMKEILATLSQYPIKTRVSMTGTMIVARDSAHAKLRERLEK 420 LP VEQ+LGGEVV+IDLN+PM+EILATLS+YP KTR+S++GTMIVARDSAHAKLRERL+ Sbjct: 357 LPEVEQALGGEVVQIDLNQPMQEILATLSKYPTKTRLSLSGTMIVARDSAHAKLRERLDN 416 Query: 421 GEPLPDYFKNHPVYYAGPAKTPDGYASGAFGPTTAGRMDSFVDQFQAAGGSMVMVAKGNR 480 GEPLPDYFKNHPVYYAGPAKTP+GYASGAFGPTTAGRMDSFVDQFQAAGGSMVMVAKGNR Sbjct: 417 GEPLPDYFKNHPVYYAGPAKTPEGYASGAFGPTTAGRMDSFVDQFQAAGGSMVMVAKGNR 476 Query: 481 AVAVREACKKHGGFYLGSIGGAAANLAEHCIKKVEVVEYPELGMEAIWRIEVVDFPAFII 540 AVAVREACKKHGGFYLGSIGGAAANLAEHCIKKVE+VEYPELGMEAIWRIEV DFPAFII Sbjct: 477 AVAVREACKKHGGFYLGSIGGAAANLAEHCIKKVELVEYPELGMEAIWRIEVQDFPAFII 536 Query: 541 IDDKGNDFFKELNLG 555 IDDKGNDFFKELNLG Sbjct: 537 IDDKGNDFFKELNLG 551