BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0046.0018.p         (108 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001329166.1| regulatory protein ArsR [Sinorhizobium medic...   132   2e-29
ref|NP_772292.1| transcriptional regulator [Bradyrhizobium japon...   129   2e-28
ref|YP_468614.1| ArsR family transcriptional regulator [Rhizobiu...   128   3e-28
ref|YP_002543655.1| transcriptional regulator protein [Agrobacte...   128   4e-28
ref|YP_001204850.1| putative transcriptional regulator [Bradyrhi...   123   8e-27

>ref|YP_001329166.1| regulatory protein ArsR [Sinorhizobium medicae WSM419]
 gb|ABR62331.1| regulatory protein ArsR [Sinorhizobium medicae WSM419]
          Length = 109

 Score =  132 bits (332), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 62/106 (58%), Positives = 76/106 (71%)

Query: 1   MPAATQLTDVLKTLADPTRRAVFERIAREGEIAATGLVQGSKVSQPAVSQHLRALRDAGL 60
           M  A  +  V++ LADPTRRAVFER+    EI    L +GS V+Q A+SQHL+AL+ AGL
Sbjct: 1   MTEAASINAVMRALADPTRRAVFERVVSSDEITVVELTRGSGVTQGAISQHLKALKQAGL 60

Query: 61  VAERREGRHIHYRVAPKGLGPLIDWLGHYETFWTERFANLERLLKE 106
           VAER EGR ++YR  P+GL PL+DW+ HY  FW ERFANL  LLKE
Sbjct: 61  VAERPEGRKVYYRAQPEGLEPLVDWMSHYGVFWRERFANLRLLLKE 106


>ref|NP_772292.1| transcriptional regulator [Bradyrhizobium japonicum USDA 110]
 dbj|BAC50917.1| transcriptional regulatory protein [Bradyrhizobium japonicum USDA
           110]
          Length = 111

 Score =  129 bits (323), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 60/104 (57%), Positives = 77/104 (74%)

Query: 3   AATQLTDVLKTLADPTRRAVFERIAREGEIAATGLVQGSKVSQPAVSQHLRALRDAGLVA 62
           A   +T V++ LADPTRRAVFER+    EI+   L +GS V+Q A+SQHL++L+ AGLVA
Sbjct: 5   APNPVTTVMRALADPTRRAVFERVFESKEISVAELTRGSGVTQGAISQHLKSLKQAGLVA 64

Query: 63  ERREGRHIHYRVAPKGLGPLIDWLGHYETFWTERFANLERLLKE 106
           ER EGR+++YR AP+GL PL+ W+ HY  FW ERF NL  LLKE
Sbjct: 65  ERAEGRNVYYRAAPQGLEPLVTWMDHYGVFWRERFQNLRDLLKE 108


>ref|YP_468614.1| ArsR family transcriptional regulator [Rhizobium etli CFN 42]
 gb|ABC89887.1| probable transcriptional regulator protein, ArsR family [Rhizobium
           etli CFN 42]
          Length = 109

 Score =  128 bits (321), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 59/100 (59%), Positives = 74/100 (74%)

Query: 7   LTDVLKTLADPTRRAVFERIAREGEIAATGLVQGSKVSQPAVSQHLRALRDAGLVAERRE 66
           +T +++ LADPTRRAVFE+I    EI    L + S V+Q AVSQHL+AL+ AGLV ER E
Sbjct: 7   ITTIMRALADPTRRAVFEQIVNSDEITVVELTRASTVTQGAVSQHLKALKLAGLVTERPE 66

Query: 67  GRHIHYRVAPKGLGPLIDWLGHYETFWTERFANLERLLKE 106
           GR ++YR  P+GL PL+DW+ HY TFW ERFA+L  LLKE
Sbjct: 67  GRKVYYRAEPEGLAPLVDWMSHYGTFWRERFADLRTLLKE 106


>ref|YP_002543655.1| transcriptional regulator protein [Agrobacterium radiobacter K84]
 gb|ACM25729.1| transcriptional regulator protein [Agrobacterium radiobacter K84]
          Length = 109

 Score =  128 bits (321), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 59/106 (55%), Positives = 75/106 (70%)

Query: 1   MPAATQLTDVLKTLADPTRRAVFERIAREGEIAATGLVQGSKVSQPAVSQHLRALRDAGL 60
           M  A  +  V++ LADPTRRAVFE++    EI    L +GS V+Q A+SQHL+AL+ AGL
Sbjct: 1   MTEAAPINAVMRALADPTRRAVFEKVVSSDEITVVELTRGSGVTQGAISQHLKALKQAGL 60

Query: 61  VAERREGRHIHYRVAPKGLGPLIDWLGHYETFWTERFANLERLLKE 106
           VAER EGR ++YR  P+GL PL++W+ HY  FW ERF NL  LLKE
Sbjct: 61  VAERPEGRKVYYRAQPEGLDPLVEWMSHYGVFWRERFVNLRTLLKE 106


>ref|YP_001204850.1| putative transcriptional regulator [Bradyrhizobium sp. ORS 278]
 emb|CAL76613.1| putative transcriptional regulatory protein, Ars Family
           [Bradyrhizobium sp. ORS 278]
          Length = 99

 Score =  123 bits (309), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 57/96 (59%), Positives = 71/96 (73%)

Query: 11  LKTLADPTRRAVFERIAREGEIAATGLVQGSKVSQPAVSQHLRALRDAGLVAERREGRHI 70
           ++ LADPTRRAVFERI    EI    L +GS V+Q A+SQHL+AL+ AGLV ER EGR +
Sbjct: 1   MRALADPTRRAVFERIVDADEITVVELTRGSTVTQGAISQHLKALKQAGLVCERPEGRKV 60

Query: 71  HYRVAPKGLGPLIDWLGHYETFWTERFANLERLLKE 106
           +YR  P+GL PL DW+ HY  FW ERFA+L +LLK+
Sbjct: 61  YYRAEPRGLEPLADWMSHYGAFWRERFADLRKLLKD 96