BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0046.0007.p         (91 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001241360.1| flagellar biosynthesis protein FlhB [Bradyrh...   142   2e-32
ref|YP_001206938.1| flagellar biosynthesis protein FlhB [Bradyrh...   139   1e-31
ref|YP_317751.1| flagellar biosynthesis protein FlhB [Nitrobacte...   136   8e-31
ref|YP_576679.1| flagellar biosynthesis protein FlhB [Nitrobacte...   134   3e-30
ref|NP_772449.1| flagellar biosynthesis protein FlhB [Bradyrhizo...   134   6e-30

>ref|YP_001241360.1| flagellar biosynthesis protein FlhB [Bradyrhizobium sp. BTAi1]
 gb|ABQ37454.1| Flagellar biosynthetic protein FlhB [Bradyrhizobium sp. BTAi1]
          Length = 359

 Score =  142 bits (357), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 63/76 (82%), Positives = 72/76 (94%)

Query: 3  DDTEDKTEDPTQKRLDEALEKGDVVKSQEVNTWFVIAGGTLVLSTFSGSIGSGILMPLRN 62
          DD+EDKTEDPTQKRLD+ALE+GDVVKSQE+NTWFVIA  TLV+STFSGSIG+ +L+P+RN
Sbjct: 5  DDSEDKTEDPTQKRLDQALERGDVVKSQELNTWFVIAAATLVMSTFSGSIGTAVLVPMRN 64

Query: 63 LIANSWMIRTDGAGLL 78
          LIANSWMI TDGAGLL
Sbjct: 65 LIANSWMIHTDGAGLL 80


>ref|YP_001206938.1| flagellar biosynthesis protein FlhB [Bradyrhizobium sp. ORS 278]
 emb|CAL78721.1| Flagellar biosynthetic protein FlhB [Bradyrhizobium sp. ORS 278]
          Length = 359

 Score =  139 bits (351), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 62/75 (82%), Positives = 71/75 (94%)

Query: 4  DTEDKTEDPTQKRLDEALEKGDVVKSQEVNTWFVIAGGTLVLSTFSGSIGSGILMPLRNL 63
          DTEDKTEDPTQKRLD+ALE+GDVVKSQE+NTWFVIA  TLV++TFSGSIG+ +L+P+RNL
Sbjct: 6  DTEDKTEDPTQKRLDQALERGDVVKSQELNTWFVIAAATLVMTTFSGSIGTAVLVPMRNL 65

Query: 64 IANSWMIRTDGAGLL 78
          IANSWMI TDGAGLL
Sbjct: 66 IANSWMIHTDGAGLL 80


>ref|YP_317751.1| flagellar biosynthesis protein FlhB [Nitrobacter winogradskyi
          Nb-255]
 gb|ABA04399.1| Flagellar biosynthetic protein FlhB [Nitrobacter winogradskyi
          Nb-255]
          Length = 359

 Score =  136 bits (343), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 66/77 (85%), Positives = 70/77 (90%), Gaps = 1/77 (1%)

Query: 2  ADDTEDKTEDPTQKRLDEALEKGDVVKSQEVNTWFVIAGGTLVLSTFSGSIGSGILMPLR 61
          +DDTE KTEDPTQKRLD+ALE+GDV KSQEVNTWFVIAG TLVLSTFSGSIGSG  +PLR
Sbjct: 5  SDDTE-KTEDPTQKRLDDALERGDVAKSQEVNTWFVIAGATLVLSTFSGSIGSGFELPLR 63

Query: 62 NLIANSWMIRTDGAGLL 78
          NLIANSW IRTDG GLL
Sbjct: 64 NLIANSWQIRTDGPGLL 80


>ref|YP_576679.1| flagellar biosynthesis protein FlhB [Nitrobacter hamburgensis
          X14]
 gb|ABE62219.1| flagellar biosynthetic protein FlhB [Nitrobacter hamburgensis
          X14]
          Length = 359

 Score =  134 bits (338), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 63/77 (81%), Positives = 69/77 (89%), Gaps = 1/77 (1%)

Query: 2  ADDTEDKTEDPTQKRLDEALEKGDVVKSQEVNTWFVIAGGTLVLSTFSGSIGSGILMPLR 61
          +DDTE KTEDPTQKRLD+ALE+GDV KSQEVNTWFVIAG TLVL+TF GS+G G+ MPLR
Sbjct: 5  SDDTE-KTEDPTQKRLDDALERGDVAKSQEVNTWFVIAGATLVLATFGGSVGGGVEMPLR 63

Query: 62 NLIANSWMIRTDGAGLL 78
          NLIANSW IRTDG GLL
Sbjct: 64 NLIANSWQIRTDGPGLL 80


>ref|NP_772449.1| flagellar biosynthesis protein FlhB [Bradyrhizobium japonicum
          USDA 110]
 dbj|BAC51074.1| flagellar biosynthetic protein [Bradyrhizobium japonicum USDA
          110]
          Length = 359

 Score =  134 bits (336), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 58/76 (76%), Positives = 70/76 (92%)

Query: 3  DDTEDKTEDPTQKRLDEALEKGDVVKSQEVNTWFVIAGGTLVLSTFSGSIGSGILMPLRN 62
          +D E +TEDPTQKRLDEALE+GDV KSQE+NTWF+IAGGTLV+STFSGS+GSG++ P+RN
Sbjct: 5  NDPESQTEDPTQKRLDEALERGDVAKSQEINTWFMIAGGTLVVSTFSGSVGSGLVTPMRN 64

Query: 63 LIANSWMIRTDGAGLL 78
          L+ANSWMI+TDG  LL
Sbjct: 65 LLANSWMIKTDGRALL 80