BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0046.0002.p         (136 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_772454.1| flagellar basal body rod protein FlgB [Bradyrhi...   209   1e-52
ref|YP_487382.1| flagellar basal body rod protein FlgB [Rhodopse...   205   2e-51
ref|YP_001206943.1| flagellar basal body rod protein FlgB [Brady...   204   4e-51
ref|NP_949225.1| flagellar basal body rod protein FlgB [Rhodopse...   203   8e-51
ref|YP_001993382.1| flagellar basal body rod protein FlgB [Rhodo...   202   2e-50

>ref|NP_772454.1| flagellar basal body rod protein FlgB [Bradyrhizobium japonicum
           USDA 110]
 dbj|BAC51079.1| flgB [Bradyrhizobium japonicum USDA 110]
          Length = 134

 Score =  209 bits (532), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 101/136 (74%), Positives = 116/136 (85%), Gaps = 2/136 (1%)

Query: 1   MAMNDLPILSALRTKMQWHQERQRVLAENISNSDTPSFRPRDLVEPKFDRAGATVGGGVG 60
           M++NDLP+LSALRTKMQWHQERQRVL+EN+SNSDTP FRPRDLVEPK DRAGA V G +G
Sbjct: 1   MSINDLPVLSALRTKMQWHQERQRVLSENVSNSDTPKFRPRDLVEPKLDRAGA-VTGSMG 59

Query: 61  TLPMMQTSATHMAASGAPDSFDNDRGKSGFQTRPAGNAVNLEEQMLKVSANQMDYAAVTS 120
            L M  TSA+HM  SGA   FD +R  +GF+TRPAGNAVNLEE+M+K ++NQMDYAA TS
Sbjct: 60  PLAMTVTSASHMTPSGAASGFDQNR-NAGFETRPAGNAVNLEEEMMKAASNQMDYAAATS 118

Query: 121 LYSRSLHLLKTAIGKG 136
           LYS+SL LLKTAIGKG
Sbjct: 119 LYSKSLRLLKTAIGKG 134


>ref|YP_487382.1| flagellar basal body rod protein FlgB [Rhodopseudomonas palustris
           HaA2]
 gb|ABD08471.1| flagellar basal-body rod protein FlgB [Rhodopseudomonas palustris
           HaA2]
          Length = 145

 Score =  205 bits (521), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 101/136 (74%), Positives = 114/136 (83%), Gaps = 2/136 (1%)

Query: 1   MAMNDLPILSALRTKMQWHQERQRVLAENISNSDTPSFRPRDLVEPKFDRAGA-TVGGGV 59
           MA+NDLP+L+ALRTKMQWHQERQ+VLAEN+SNSDTP F+PRDLV PKF+ AG  T     
Sbjct: 10  MAINDLPMLAALRTKMQWHQERQKVLAENVSNSDTPGFQPRDLVAPKFNSAGQLTASSAG 69

Query: 60  GTLPMMQTSATHMAASGAPDSFDNDRGKSGFQTRPAGNAVNLEEQMLKVSANQMDYAAVT 119
           G LPMM TSA+HM A G   SF  DR ++GFQTRPAGNAVNLE+QM+KVSANQMDYAA T
Sbjct: 70  GALPMMMTSASHMKAPGGAVSFAEDR-RAGFQTRPAGNAVNLEDQMMKVSANQMDYAAAT 128

Query: 120 SLYSRSLHLLKTAIGK 135
           SLY+RSL LLKTAIGK
Sbjct: 129 SLYTRSLGLLKTAIGK 144


>ref|YP_001206943.1| flagellar basal body rod protein FlgB [Bradyrhizobium sp. ORS 278]
 emb|CAL78726.1| Putative flagellar basal-body rod protein flgB (putative proximal
           rod protein) [Bradyrhizobium sp. ORS 278]
          Length = 135

 Score =  204 bits (518), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 100/137 (72%), Positives = 117/137 (85%), Gaps = 3/137 (2%)

Query: 1   MAMNDLPILSALRTKMQWHQERQRVLAENISNSDTPSFRPRDLVEPKFDRAGATVGGGVG 60
           M++ND+P+LSALRTKMQWHQERQRVL+EN+SNSDTP+F+P+DLVEPKFD  G +V GG  
Sbjct: 1   MSINDIPVLSALRTKMQWHQERQRVLSENVSNSDTPNFKPKDLVEPKFDSTGQSV-GGFA 59

Query: 61  TLPMMQTSATHMA-ASGAPDSFDNDRGKSGFQTRPAGNAVNLEEQMLKVSANQMDYAAVT 119
            L + +TSA H+  ASG   SFD +R K GFQTRPAGNAV+LEE+MLKVSANQMDYAA T
Sbjct: 60  PLSLTRTSAAHITPASGDSASFDQNR-KIGFQTRPAGNAVSLEEEMLKVSANQMDYAAAT 118

Query: 120 SLYSRSLHLLKTAIGKG 136
           SLY +SLHLLKTAIGKG
Sbjct: 119 SLYGKSLHLLKTAIGKG 135


>ref|NP_949225.1| flagellar basal body rod protein FlgB [Rhodopseudomonas palustris
           CGA009]
 emb|CAE29329.1| possible flagellar basal-body rod protein FlgB [Rhodopseudomonas
           palustris CGA009]
          Length = 168

 Score =  203 bits (516), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 99/135 (73%), Positives = 112/135 (82%), Gaps = 1/135 (0%)

Query: 1   MAMNDLPILSALRTKMQWHQERQRVLAENISNSDTPSFRPRDLVEPKFDRAGATVGGGVG 60
           M +NDLP L+ALRTKMQWHQERQ+VLAENISNSDTP+FRPRDLVEPKF   G   GG  G
Sbjct: 34  MPINDLPELNALRTKMQWHQERQKVLAENISNSDTPNFRPRDLVEPKFTPEGQAAGGPGG 93

Query: 61  TLPMMQTSATHMAASGAPDSFDNDRGKSGFQTRPAGNAVNLEEQMLKVSANQMDYAAVTS 120
           +LP+M+TSA+H+   G   SF  +    GFQTRPAGNAVNLE++MLKVS+NQMDYAAVTS
Sbjct: 94  SLPLMRTSASHLTPPGGSPSFSTNN-NGGFQTRPAGNAVNLEDEMLKVSSNQMDYAAVTS 152

Query: 121 LYSRSLHLLKTAIGK 135
           LYSRSL LLKTAIGK
Sbjct: 153 LYSRSLGLLKTAIGK 167


>ref|YP_001993382.1| flagellar basal body rod protein FlgB [Rhodopseudomonas palustris
           TIE-1]
 gb|ACF02907.1| flagellar basal body rod protein FlgB [Rhodopseudomonas palustris
           TIE-1]
          Length = 135

 Score =  202 bits (513), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 99/135 (73%), Positives = 112/135 (82%), Gaps = 1/135 (0%)

Query: 1   MAMNDLPILSALRTKMQWHQERQRVLAENISNSDTPSFRPRDLVEPKFDRAGATVGGGVG 60
           M +NDLP L+ALRTKMQWHQERQ+VLAENISNSDTP+FRPRDLVEPKF   G   GG  G
Sbjct: 1   MPINDLPELNALRTKMQWHQERQKVLAENISNSDTPNFRPRDLVEPKFTPEGQAAGGPGG 60

Query: 61  TLPMMQTSATHMAASGAPDSFDNDRGKSGFQTRPAGNAVNLEEQMLKVSANQMDYAAVTS 120
           +LP+M+TSA+H+   G   SF  +    GFQTRPAGNAVNLE++MLKVS+NQMDYAAVTS
Sbjct: 61  SLPLMRTSASHLTPPGGSPSFSTNN-NGGFQTRPAGNAVNLEDEMLKVSSNQMDYAAVTS 119

Query: 121 LYSRSLHLLKTAIGK 135
           LYSRSL LLKTAIGK
Sbjct: 120 LYSRSLGLLKTAIGK 134