BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0046.0001.p         (118 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_576673.1| hypothetical protein Nham_1391 [Nitrobacter ham...   151   2e-35
ref|YP_001241366.1| hypothetical protein BBta_5498 [Bradyrhizobi...   151   3e-35
ref|YP_001206944.1| hypothetical protein BRADO5030 [Bradyrhizobi...   149   1e-34
ref|YP_317745.1| hypothetical protein Nwi_1131 [Nitrobacter wino...   145   2e-33
ref|NP_949226.1| hypothetical protein RPA3889 [Rhodopseudomonas ...   144   4e-33

>ref|YP_576673.1| hypothetical protein Nham_1391 [Nitrobacter hamburgensis X14]
 gb|ABE62213.1| conserved hypothetical protein [Nitrobacter hamburgensis X14]
          Length = 312

 Score =  151 bits (382), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 83/107 (77%), Positives = 92/107 (85%)

Query: 10  MQVITFVLAFVVVLALIGVTAWLVRRFAGNRLGANANRGRMPRLAVIDAAAVDGRRRLVL 69
           MQ +TFV+AF+VVLALI  +AWLVRRFAGNRLG NANRGRMPRLAVIDAAA+DGRRRLVL
Sbjct: 1   MQAVTFVIAFIVVLALIAGSAWLVRRFAGNRLGTNANRGRMPRLAVIDAAAIDGRRRLVL 60

Query: 70  VRRDNIEHLLMIGGPTDIVVEPNIVRAMPARDLVPLGSGPGLEIRAS 116
           VRRDN+EHLLMIGGP+DIVVEPNIVRA P RD +P     G E+  S
Sbjct: 61  VRRDNVEHLLMIGGPSDIVVEPNIVRATPGRDQLPQRPSSGSELSPS 107


>ref|YP_001241366.1| hypothetical protein BBta_5498 [Bradyrhizobium sp. BTAi1]
 gb|ABQ37460.1| putative exported protein of unknown function [Bradyrhizobium sp.
           BTAi1]
          Length = 350

 Score =  151 bits (381), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 83/99 (83%), Positives = 87/99 (87%)

Query: 10  MQVITFVLAFVVVLALIGVTAWLVRRFAGNRLGANANRGRMPRLAVIDAAAVDGRRRLVL 69
           MQ +TF  AFV VLALIG+ AWLVRRFAGNRLG N NRGRMPRLAVIDAAAVDGRRRLVL
Sbjct: 1   MQALTFFFAFVAVLALIGLAAWLVRRFAGNRLGTNPNRGRMPRLAVIDAAAVDGRRRLVL 60

Query: 70  VRRDNIEHLLMIGGPTDIVVEPNIVRAMPARDLVPLGSG 108
           VRRDNIEHLLMIGGPTDIVVE NIVRAMPAR+ +P   G
Sbjct: 61  VRRDNIEHLLMIGGPTDIVVESNIVRAMPAREQLPQRPG 99


>ref|YP_001206944.1| hypothetical protein BRADO5030 [Bradyrhizobium sp. ORS 278]
 emb|CAL78727.1| conserved hypothetical protein; putative exported protein
           [Bradyrhizobium sp. ORS 278]
          Length = 349

 Score =  149 bits (376), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 83/99 (83%), Positives = 87/99 (87%)

Query: 10  MQVITFVLAFVVVLALIGVTAWLVRRFAGNRLGANANRGRMPRLAVIDAAAVDGRRRLVL 69
           MQ +TF  AFV VLALIG+ AWLVRRFAGNRLG N NRGRMPRLAVIDAAAVDGRRRLVL
Sbjct: 1   MQALTFFFAFVAVLALIGLAAWLVRRFAGNRLGTNPNRGRMPRLAVIDAAAVDGRRRLVL 60

Query: 70  VRRDNIEHLLMIGGPTDIVVEPNIVRAMPARDLVPLGSG 108
           VRRDNIEHLLMIGGPTDIVVE NIVRAMPAR+ +P   G
Sbjct: 61  VRRDNIEHLLMIGGPTDIVVESNIVRAMPAREQLPQRPG 99


>ref|YP_317745.1| hypothetical protein Nwi_1131 [Nitrobacter winogradskyi Nb-255]
 gb|ABA04393.1| conserved hypothetical protein [Nitrobacter winogradskyi Nb-255]
          Length = 285

 Score =  145 bits (366), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 83/104 (79%), Positives = 88/104 (84%)

Query: 10  MQVITFVLAFVVVLALIGVTAWLVRRFAGNRLGANANRGRMPRLAVIDAAAVDGRRRLVL 69
           MQ +TFV+AF+VVLALI   AWLVRRFAG+RLG NANRGRMPRLAVIDAAAVDGRRRLVL
Sbjct: 1   MQAVTFVIAFIVVLALIAGAAWLVRRFAGDRLGVNANRGRMPRLAVIDAAAVDGRRRLVL 60

Query: 70  VRRDNIEHLLMIGGPTDIVVEPNIVRAMPARDLVPLGSGPGLEI 113
           VRRDN+EHLLMIGGPTDIVVE NIVRA P RD  P    PG E 
Sbjct: 61  VRRDNVEHLLMIGGPTDIVVEHNIVRAAPGRDQAPQRPLPGSET 104


>ref|NP_949226.1| hypothetical protein RPA3889 [Rhodopseudomonas palustris CGA009]
 emb|CAE29330.1| unknown protein [Rhodopseudomonas palustris CGA009]
          Length = 384

 Score =  144 bits (364), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 79/100 (79%), Positives = 88/100 (88%)

Query: 9   NMQVITFVLAFVVVLALIGVTAWLVRRFAGNRLGANANRGRMPRLAVIDAAAVDGRRRLV 68
           + Q + F LAF+ VLALIG  AWLVRRFAGNRLG NA+RGRMPRLAVIDAAAVDGRRRLV
Sbjct: 2   SSQPLMFFLAFLAVLALIGAAAWLVRRFAGNRLGTNASRGRMPRLAVIDAAAVDGRRRLV 61

Query: 69  LVRRDNIEHLLMIGGPTDIVVEPNIVRAMPARDLVPLGSG 108
           LVRRDN+EHLLMIGGP+DIV+EPNIVRA PARD +P  +G
Sbjct: 62  LVRRDNVEHLLMIGGPSDIVIEPNIVRATPARDPLPTRAG 101