BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0045.0052.p (329 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_01044464.1| Transposase [Nitrobacter sp. Nb-311A] >gi|857... 612 e-173 ref|YP_004011610.1| transposase IS4 family protein [Rhodomicrobi... 612 e-173 ref|YP_576552.1| transposase, IS4 [Nitrobacter hamburgensis X14]... 565 e-159 ref|YP_002424311.1| transposase IS4 family protein [Methylobacte... 512 e-143 ref|ZP_01046696.1| ISGsu2, transposase [Nitrobacter sp. Nb-311A]... 494 e-138 >ref|ZP_01044464.1| Transposase [Nitrobacter sp. Nb-311A] ref|ZP_01044577.1| Transposase [Nitrobacter sp. Nb-311A] ref|ZP_01044756.1| Transposase [Nitrobacter sp. Nb-311A] ref|ZP_01046932.1| Transposase [Nitrobacter sp. Nb-311A] ref|ZP_01047661.1| Transposase [Nitrobacter sp. Nb-311A] ref|ZP_01048033.1| Transposase [Nitrobacter sp. Nb-311A] ref|ZP_01048074.1| Transposase [Nitrobacter sp. Nb-311A] ref|ZP_01048147.1| Transposase [Nitrobacter sp. Nb-311A] ref|ZP_01048228.1| Transposase [Nitrobacter sp. Nb-311A] ref|ZP_01048487.1| Transposase [Nitrobacter sp. Nb-311A] gb|EAQ33538.1| Transposase [Nitrobacter sp. Nb-311A] gb|EAQ33817.1| Transposase [Nitrobacter sp. Nb-311A] gb|EAQ33871.1| Transposase [Nitrobacter sp. Nb-311A] gb|EAQ33972.1| Transposase [Nitrobacter sp. Nb-311A] gb|EAQ34007.1| Transposase [Nitrobacter sp. Nb-311A] gb|EAQ34421.1| Transposase [Nitrobacter sp. Nb-311A] gb|EAQ35034.1| Transposase [Nitrobacter sp. Nb-311A] gb|EAQ37245.1| Transposase [Nitrobacter sp. Nb-311A] gb|EAQ37358.1| Transposase [Nitrobacter sp. Nb-311A] gb|EAQ37537.1| Transposase [Nitrobacter sp. Nb-311A] Length = 363 Score = 612 bits (1577), Expect = e-173, Method: Compositional matrix adjust. Identities = 295/327 (90%), Positives = 308/327 (94%), Gaps = 1/327 (0%) Query: 1 VNEALSELEREFAALYSPIGRPSIPPEKLLRAMLLQAFYSIRSERLLMERLEYDLLFRWF 60 VNE L LEREFAALYSP+GRPSIPPEKLLRAMLLQAFYSIRSERLLMERLEYDLLFRWF Sbjct: 34 VNEGLVALEREFAALYSPLGRPSIPPEKLLRAMLLQAFYSIRSERLLMERLEYDLLFRWF 93 Query: 61 VGIGVDDAAWDHSVFSKNRDRLLEGDIAAKFLAAVLAQPRVKKLLSSDHFSVDGTLIEAW 120 VGIGVDD AWDHSVFSKNR+RLLEGDIAAKFL+AVLAQP+VKKLLS+DHFSVDGTLIEAW Sbjct: 94 VGIGVDDPAWDHSVFSKNRERLLEGDIAAKFLSAVLAQPKVKKLLSTDHFSVDGTLIEAW 153 Query: 121 ASMKSVKPKDGSGEPPAQG-GRNADADFHGQKRSNDTHASTTDPDARLYRKGKGKETKLC 179 ASMKSVKPKDGSGEPPA G GRNA+ADFHGQKR+NDTHASTTDPDARLY+KGKGKE KLC Sbjct: 154 ASMKSVKPKDGSGEPPAGGVGRNAEADFHGQKRTNDTHASTTDPDARLYKKGKGKEAKLC 213 Query: 180 FIGHGLMENRHGLLVDACLTQADGHAERVAALHMIEPRADRPTAITLGADKAYDVEDFVN 239 F+GHGLMENRHGLLVDACLT ADGHAERVAALHMIEPRADRP AITLGADKAYD EDFVN Sbjct: 214 FMGHGLMENRHGLLVDACLTLADGHAERVAALHMIEPRADRPLAITLGADKAYDTEDFVN 273 Query: 240 ELRSMNVTPHVTQNTSGRRSTIDGRTTRHGGYAVSQRIRKRIEEAFGWIKTIAGQEKTRF 299 ELR+M VTPHV QNT GR S IDGRTTRH GYAVSQRIRKRIEEAFGWIKT+A Q+KTRF Sbjct: 274 ELRAMKVTPHVAQNTRGRSSAIDGRTTRHSGYAVSQRIRKRIEEAFGWIKTVARQDKTRF 333 Query: 300 RGRDRVAWAFTFAATAYNLVRLPKLIA 326 RGRDRV WAFTFAA AYNLVRLPKL+A Sbjct: 334 RGRDRVEWAFTFAAAAYNLVRLPKLMA 360 >ref|YP_004011610.1| transposase IS4 family protein [Rhodomicrobium vannielii ATCC 17100] gb|ADP70511.1| transposase IS4 family protein [Rhodomicrobium vannielii ATCC 17100] Length = 363 Score = 612 bits (1577), Expect = e-173, Method: Compositional matrix adjust. Identities = 295/330 (89%), Positives = 307/330 (93%), Gaps = 1/330 (0%) Query: 1 VNEALSELEREFAALYSPIGRPSIPPEKLLRAMLLQAFYSIRSERLLMERLEYDLLFRWF 60 VNEAL LEREFAALYS IGRPSIPPEKLLRAMLLQAFYSIRSERLLMERLEYDLLFRWF Sbjct: 34 VNEALGALEREFAALYSTIGRPSIPPEKLLRAMLLQAFYSIRSERLLMERLEYDLLFRWF 93 Query: 61 VGIGVDDAAWDHSVFSKNRDRLLEGDIAAKFLAAVLAQPRVKKLLSSDHFSVDGTLIEAW 120 VGIGVDDAAWDHS FSKNRDRLLEGDIAAKFL AVLAQPRVK+LLSSDHFSVDGTLIEAW Sbjct: 94 VGIGVDDAAWDHSTFSKNRDRLLEGDIAAKFLGAVLAQPRVKRLLSSDHFSVDGTLIEAW 153 Query: 121 ASMKSVKPKDGSGEPPAQGG-RNADADFHGQKRSNDTHASTTDPDARLYRKGKGKETKLC 179 ASMKSV+PKDGSGEPP QGG RNA+ADFHGQKR+N+THASTTDP+ARLY+KG GKE KLC Sbjct: 154 ASMKSVRPKDGSGEPPVQGGGRNAEADFHGQKRTNETHASTTDPEARLYKKGSGKEAKLC 213 Query: 180 FIGHGLMENRHGLLVDACLTQADGHAERVAALHMIEPRADRPTAITLGADKAYDVEDFVN 239 FIGHGLMENRHGLLVDACLT ADGHAERVAALHMIEP ADRP ITLGADK YD +DFVN Sbjct: 214 FIGHGLMENRHGLLVDACLTLADGHAERVAALHMIEPLADRPRRITLGADKGYDTQDFVN 273 Query: 240 ELRSMNVTPHVTQNTSGRRSTIDGRTTRHGGYAVSQRIRKRIEEAFGWIKTIAGQEKTRF 299 ELRSM VTPHVT+NTSGRRS ID RTTRHGGY SQRIRKRIEEAFGWIKTIAGQ+KT+F Sbjct: 274 ELRSMKVTPHVTRNTSGRRSAIDVRTTRHGGYVASQRIRKRIEEAFGWIKTIAGQDKTKF 333 Query: 300 RGRDRVAWAFTFAATAYNLVRLPKLIAETG 329 RGRDRV WAFTFAA AYNLVRLPKL+ ETG Sbjct: 334 RGRDRVGWAFTFAAAAYNLVRLPKLMTETG 363 >ref|YP_576552.1| transposase, IS4 [Nitrobacter hamburgensis X14] gb|ABE62092.1| transposase, IS4 family [Nitrobacter hamburgensis X14] Length = 340 Score = 565 bits (1455), Expect = e-159, Method: Compositional matrix adjust. Identities = 275/306 (89%), Positives = 284/306 (92%), Gaps = 1/306 (0%) Query: 1 VNEALSELEREFAALYSPIGRPSIPPEKLLRAMLLQAFYSIRSERLLMERLEYDLLFRWF 60 VNEAL EREFAALYSPIGRPSIPPEKLLRAMLLQAFYSIRSERLLMERLEYDLLFRWF Sbjct: 34 VNEALVAFEREFAALYSPIGRPSIPPEKLLRAMLLQAFYSIRSERLLMERLEYDLLFRWF 93 Query: 61 VGIGVDDAAWDHSVFSKNRDRLLEGDIAAKFLAAVLAQPRVKKLLSSDHFSVDGTLIEAW 120 VGIGVDD AWDHSVFSKNRDRLLE DIAAKFL+AVLAQP+VKKLLSSDHFSVDGTLIEAW Sbjct: 94 VGIGVDDPAWDHSVFSKNRDRLLEVDIAAKFLSAVLAQPKVKKLLSSDHFSVDGTLIEAW 153 Query: 121 ASMKSVKPKDGSGEPPAQG-GRNADADFHGQKRSNDTHASTTDPDARLYRKGKGKETKLC 179 ASMKSVKPKDGSGEPPA G GRNA+ADFHGQ R+NDT ASTTDPDARLY+KGKGKE KLC Sbjct: 154 ASMKSVKPKDGSGEPPAGGAGRNAEADFHGQTRTNDTPASTTDPDARLYKKGKGKEAKLC 213 Query: 180 FIGHGLMENRHGLLVDACLTQADGHAERVAALHMIEPRADRPTAITLGADKAYDVEDFVN 239 F+GHGLMENRHGLLVDACLT ADGHAERVAALHMIEPRADRP AITLGADKAY E FVN Sbjct: 214 FMGHGLMENRHGLLVDACLTLADGHAERVAALHMIEPRADRPLAITLGADKAYGTEGFVN 273 Query: 240 ELRSMNVTPHVTQNTSGRRSTIDGRTTRHGGYAVSQRIRKRIEEAFGWIKTIAGQEKTRF 299 ELR+M VTPHV QNTSGR S IDGRT RH GYAVSQRIRKRIEEAFGWIKT+A Q+KTRF Sbjct: 274 ELRAMKVTPHVAQNTSGRSSAIDGRTMRHSGYAVSQRIRKRIEEAFGWIKTVASQDKTRF 333 Query: 300 RGRDRV 305 RGRDRV Sbjct: 334 RGRDRV 339 >ref|YP_002424311.1| transposase IS4 family protein [Methylobacterium chloromethanicum CM4] gb|ACK86383.1| transposase IS4 family protein [Methylobacterium chloromethanicum CM4] Length = 365 Score = 512 bits (1318), Expect = e-143, Method: Compositional matrix adjust. Identities = 247/325 (76%), Positives = 275/325 (84%), Gaps = 3/325 (0%) Query: 4 ALSELEREFAALYSP-IGRPSIPPEKLLRAMLLQAFYSIRSERLLMERLEYDLLFRWFVG 62 AL+ L ++F+ LY+ +GRPSIPPE L RA+LLQAFYSIRSER LMERLE+DLLFRWFVG Sbjct: 37 ALAALNQDFSTLYAARMGRPSIPPEMLPRAILLQAFYSIRSERQLMERLEFDLLFRWFVG 96 Query: 63 IGVDDAAWDHSVFSKNRDRLLEGDIAAKFLAAVLAQPRVKKLLSSDHFSVDGTLIEAWAS 122 +GVDD AWDHS F+KNRDRLL G+IAAKFLAAVLAQPRVK+LLSSDHFSVDGTLIEAWAS Sbjct: 97 LGVDDPAWDHSSFTKNRDRLLAGEIAAKFLAAVLAQPRVKRLLSSDHFSVDGTLIEAWAS 156 Query: 123 MKSVKPKDGSGE--PPAQGGRNADADFHGQKRSNDTHASTTDPDARLYRKGKGKETKLCF 180 MKS +PKD S + PP G RNA+ DF GQ RSN+TH STTDP+ARLYRKG+G+E KLCF Sbjct: 157 MKSFRPKDQSEDQAPPPAGRRNAEVDFKGQTRSNETHESTTDPEARLYRKGRGREAKLCF 216 Query: 181 IGHGLMENRHGLLVDACLTQADGHAERVAALHMIEPRADRPTAITLGADKAYDVEDFVNE 240 IGH LMENR L+VD LT ADGHAER+AAL MIEPRADRP AI++GADKAYD EDFVNE Sbjct: 217 IGHALMENRSALIVDTRLTSADGHAERIAALAMIEPRADRPRAISVGADKAYDAEDFVNE 276 Query: 241 LRSMNVTPHVTQNTSGRRSTIDGRTTRHGGYAVSQRIRKRIEEAFGWIKTIAGQEKTRFR 300 L SMNV HV QNT+GRRS+ID RTTRH GY SQRIRKRIEE FGWIKT+ GQ K RFR Sbjct: 277 LASMNVRAHVAQNTNGRRSSIDRRTTRHAGYGTSQRIRKRIEEGFGWIKTVGGQRKARFR 336 Query: 301 GRDRVAWAFTFAATAYNLVRLPKLI 325 GRD+ WAF F A AYNLVRLPKL+ Sbjct: 337 GRDKAGWAFAFTAAAYNLVRLPKLL 361 >ref|ZP_01046696.1| ISGsu2, transposase [Nitrobacter sp. Nb-311A] gb|EAQ35249.1| ISGsu2, transposase [Nitrobacter sp. Nb-311A] Length = 567 Score = 494 bits (1272), Expect = e-138, Method: Compositional matrix adjust. Identities = 240/267 (89%), Positives = 250/267 (93%), Gaps = 1/267 (0%) Query: 1 VNEALSELEREFAALYSPIGRPSIPPEKLLRAMLLQAFYSIRSERLLMERLEYDLLFRWF 60 VNE L LEREFAALYSP+GRPSIPPEKLLRAMLLQAFYSIRSERLLMERLEYDLLFRWF Sbjct: 34 VNEGLVALEREFAALYSPLGRPSIPPEKLLRAMLLQAFYSIRSERLLMERLEYDLLFRWF 93 Query: 61 VGIGVDDAAWDHSVFSKNRDRLLEGDIAAKFLAAVLAQPRVKKLLSSDHFSVDGTLIEAW 120 VGIGVDD AWDHSVFSKNR+RLLEGDIAAKFL+AVLAQP+VKKLLS+DHFSVDGTLIEAW Sbjct: 94 VGIGVDDPAWDHSVFSKNRERLLEGDIAAKFLSAVLAQPKVKKLLSTDHFSVDGTLIEAW 153 Query: 121 ASMKSVKPKDGSGEPPAQG-GRNADADFHGQKRSNDTHASTTDPDARLYRKGKGKETKLC 179 ASMKSVKPKDGSGEPPA G GRNA+ADFHGQKR+NDTHASTTDPDARLY+KGKGKE KLC Sbjct: 154 ASMKSVKPKDGSGEPPAGGVGRNAEADFHGQKRTNDTHASTTDPDARLYKKGKGKEAKLC 213 Query: 180 FIGHGLMENRHGLLVDACLTQADGHAERVAALHMIEPRADRPTAITLGADKAYDVEDFVN 239 F+GHGLMENRHGLLVDACLT ADGHAERVAALHMIEPRADRP AITLGADKAYD EDFVN Sbjct: 214 FMGHGLMENRHGLLVDACLTLADGHAERVAALHMIEPRADRPLAITLGADKAYDTEDFVN 273 Query: 240 ELRSMNVTPHVTQNTSGRRSTIDGRTT 266 ELR+M VTPHV QNT GRRST R T Sbjct: 274 ELRAMKVTPHVAQNTRGRRSTDARRGT 300