BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0045.0036.p (395 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001241724.1| homocitrate synthase [Bradyrhizobium sp. BTA... 566 e-159 ref|YP_004111063.1| homocitrate synthase [Rhodopseudomonas palus... 563 e-158 ref|NP_949941.1| putative homocitrate synthase [Rhodopseudomonas... 563 e-158 ref|YP_001994052.1| homocitrate synthase [Rhodopseudomonas palus... 560 e-157 ref|YP_001207285.1| homocitrate synthase [Bradyrhizobium sp. ORS... 558 e-157 >ref|YP_001241724.1| homocitrate synthase [Bradyrhizobium sp. BTAi1] gb|ABQ37818.1| homocitrate synthase [Bradyrhizobium sp. BTAi1] Length = 379 Score = 566 bits (1458), Expect = e-159, Method: Compositional matrix adjust. Identities = 292/369 (79%), Positives = 329/369 (89%) Query: 21 VLNDTTLRDGEQAPGVAFTTEEKLAIAQALARAGVTEIEAGTPAMGNEEITAIHAIVEAE 80 +LNDTTLRDGEQAPGVAF EK+AIA+ALARAGV EIEAGTPAMG +EI AI AIV+A Sbjct: 5 ILNDTTLRDGEQAPGVAFALAEKVAIARALARAGVPEIEAGTPAMGADEIAAIRAIVDAR 64 Query: 81 LPLTTIGWCRMREADIDAAIEAKVSMVNVSIPSSDIQIAAKLGGRRDLALEQVKRVVGYA 140 LP T IGWCRMREAD+DAAI A VSMVNVSIP+SD+QIAAKLGG R ALE +KRVV YA Sbjct: 65 LPATIIGWCRMREADVDAAIAAGVSMVNVSIPTSDVQIAAKLGGDRSAALELLKRVVTYA 124 Query: 141 RERGLEVAVGGEDSSRADIDFLIRLIAAAKSAGARRFRIADTLSVLDPDTTSALVGNLRA 200 R+RGL+VAVGGEDSSRAD+ FL +IA AK+ GARRFR+ADTLSVLDPD T ALV LRA Sbjct: 125 RQRGLDVAVGGEDSSRADVGFLAEVIATAKALGARRFRVADTLSVLDPDATFALVNALRA 184 Query: 201 TTDLELEFHGHDDLGLATANTLSAIKAGASHASVTVIGLGERAGNAPLEEVAVALKQLYR 260 TTDLE+EFHGHDDLGLATANTL+A+KAGA+HASVTVIGLGERAGNAPLEEVAVAL+QLYR Sbjct: 185 TTDLEIEFHGHDDLGLATANTLAAVKAGATHASVTVIGLGERAGNAPLEEVAVALRQLYR 244 Query: 261 RETGIILPELEKVAAVVAAAAARAIPLNKAIVGEHIFTHESGIHVDGLLKDQRTYQSLDP 320 RETGI+L EL++VA VVAAAAARAIPLNKAIVGEH+FTHESGIHVDGLLKDQRTYQ+LDP Sbjct: 245 RETGIVLAELDRVANVVAAAAARAIPLNKAIVGEHVFTHESGIHVDGLLKDQRTYQALDP 304 Query: 321 VLLGRRNSFVIGKHSGLSAITALLNELQLVASADQARQILTQVRKHAIKHKVPVERETVA 380 +L GR N VIGKHSGLSAIT+LL++L+L SADQA++IL +VRKHA+ HK PV +E VA Sbjct: 305 MLFGRSNRIVIGKHSGLSAITSLLSDLRLPVSADQAQRILARVRKHAVVHKGPVPKEAVA 364 Query: 381 AIWRDVCGY 389 AIWR+VC + Sbjct: 365 AIWREVCDH 373 >ref|YP_004111063.1| homocitrate synthase [Rhodopseudomonas palustris DX-1] gb|ADU46330.1| homocitrate synthase [Rhodopseudomonas palustris DX-1] Length = 397 Score = 563 bits (1452), Expect = e-158, Method: Compositional matrix adjust. Identities = 289/384 (75%), Positives = 328/384 (85%), Gaps = 5/384 (1%) Query: 8 KPA--WPEQASA---KPTVLNDTTLRDGEQAPGVAFTTEEKLAIAQALARAGVTEIEAGT 62 KPA P+Q+ P VLNDTTLRDGEQAPGVAF+T EK+AIA+ALARAGV EIEAGT Sbjct: 5 KPAVARPDQSCGFQPAPIVLNDTTLRDGEQAPGVAFSTAEKVAIARALARAGVPEIEAGT 64 Query: 63 PAMGNEEITAIHAIVEAELPLTTIGWCRMREADIDAAIEAKVSMVNVSIPSSDIQIAAKL 122 PAMG +EI AI AIVEA LPLTTI WCRMR D+DAA++A VSMVNVS+P SD+QIAAKL Sbjct: 65 PAMGADEIAAIRAIVEAGLPLTTIAWCRMRTEDVDAALKAGVSMVNVSVPVSDVQIAAKL 124 Query: 123 GGRRDLALEQVKRVVGYARERGLEVAVGGEDSSRADIDFLIRLIAAAKSAGARRFRIADT 182 GG R A+E VKRVVGYAR+RGL+VAVGGEDSSRAD +FL +IA AK++GARRFRIADT Sbjct: 125 GGLRSNAIETVKRVVGYARDRGLDVAVGGEDSSRADPEFLAEVIATAKASGARRFRIADT 184 Query: 183 LSVLDPDTTSALVGNLRATTDLELEFHGHDDLGLATANTLSAIKAGASHASVTVIGLGER 242 LSVLDP ++ AL+ LRA+TDLELEFHGHDDLGLATANTL+A++AGASHASVTVIGLGER Sbjct: 185 LSVLDPFSSHALLATLRASTDLELEFHGHDDLGLATANTLAALRAGASHASVTVIGLGER 244 Query: 243 AGNAPLEEVAVALKQLYRRETGIILPELEKVAAVVAAAAARAIPLNKAIVGEHIFTHESG 302 AGNAPLEEVAVALKQLY RETGI+L EL VA +VA AAAR IPLNKAIVGEH+FTHESG Sbjct: 245 AGNAPLEEVAVALKQLYGRETGIVLSELGNVADLVATAAARTIPLNKAIVGEHVFTHESG 304 Query: 303 IHVDGLLKDQRTYQSLDPVLLGRRNSFVIGKHSGLSAITALLNELQLVASADQARQILTQ 362 IHVDGLLKDQRTYQSLDP L GR N VIGKHSGLSAIT+ L +L L A+AD+A+ IL + Sbjct: 305 IHVDGLLKDQRTYQSLDPNLFGRCNRIVIGKHSGLSAITSSLAKLDLPATADEAQGILAK 364 Query: 363 VRKHAIKHKVPVERETVAAIWRDV 386 VR++A+ HK PV ET+ AIWR+V Sbjct: 365 VRRYAVTHKGPVGNETLIAIWREV 388 >ref|NP_949941.1| putative homocitrate synthase [Rhodopseudomonas palustris CGA009] emb|CAE30047.1| putative homocitrate synthase [Rhodopseudomonas palustris CGA009] Length = 397 Score = 563 bits (1450), Expect = e-158, Method: Compositional matrix adjust. Identities = 284/378 (75%), Positives = 327/378 (86%), Gaps = 3/378 (0%) Query: 12 PEQAS---AKPTVLNDTTLRDGEQAPGVAFTTEEKLAIAQALARAGVTEIEAGTPAMGNE 68 P+Q+ + P VLNDTTLRDGEQAPGVAF+T EK+AIA+ALARAGV EIEAGTPAMG + Sbjct: 11 PDQSCGFQSAPIVLNDTTLRDGEQAPGVAFSTAEKVAIARALARAGVPEIEAGTPAMGVD 70 Query: 69 EITAIHAIVEAELPLTTIGWCRMREADIDAAIEAKVSMVNVSIPSSDIQIAAKLGGRRDL 128 EI AI AIVEA LPLTTI WCRMR D+DAA++A V+MVNVS+P SD+QIAAKLGG+R Sbjct: 71 EIAAIRAIVEAGLPLTTIAWCRMRTEDVDAALKAGVAMVNVSVPVSDVQIAAKLGGKRSN 130 Query: 129 ALEQVKRVVGYARERGLEVAVGGEDSSRADIDFLIRLIAAAKSAGARRFRIADTLSVLDP 188 A+E VKRVVGYAR+RGL+VAVGGEDSSRAD +FL +IA AK++GARRFRIADTLSVLDP Sbjct: 131 AIETVKRVVGYARDRGLDVAVGGEDSSRADPEFLAEVIATAKASGARRFRIADTLSVLDP 190 Query: 189 DTTSALVGNLRATTDLELEFHGHDDLGLATANTLSAIKAGASHASVTVIGLGERAGNAPL 248 ++ AL+ LRA+TDLELEFHGHDDLGLATANTL+A++AGASHASVTVIGLGERAGNAPL Sbjct: 191 FSSHALLATLRASTDLELEFHGHDDLGLATANTLAALRAGASHASVTVIGLGERAGNAPL 250 Query: 249 EEVAVALKQLYRRETGIILPELEKVAAVVAAAAARAIPLNKAIVGEHIFTHESGIHVDGL 308 EEVAVALKQLY R+TGI+L EL VA +VA AAAR IPLNKAIVGEH+FTHESGIHVDGL Sbjct: 251 EEVAVALKQLYGRDTGIVLSELGNVADLVATAAARTIPLNKAIVGEHVFTHESGIHVDGL 310 Query: 309 LKDQRTYQSLDPVLLGRRNSFVIGKHSGLSAITALLNELQLVASADQARQILTQVRKHAI 368 LKDQRTYQSLDP L GR N VIGKHSGLSAIT+ L +L L A+AD+A+ IL +VR++A+ Sbjct: 311 LKDQRTYQSLDPNLFGRSNRIVIGKHSGLSAITSSLAKLDLPATADEAQGILAKVRRYAV 370 Query: 369 KHKVPVERETVAAIWRDV 386 HK PV ET+ AIWR+V Sbjct: 371 THKGPVGNETLIAIWREV 388 >ref|YP_001994052.1| homocitrate synthase [Rhodopseudomonas palustris TIE-1] gb|ACF03577.1| homocitrate synthase [Rhodopseudomonas palustris TIE-1] Length = 397 Score = 560 bits (1444), Expect = e-157, Method: Compositional matrix adjust. Identities = 283/378 (74%), Positives = 326/378 (86%), Gaps = 3/378 (0%) Query: 12 PEQAS---AKPTVLNDTTLRDGEQAPGVAFTTEEKLAIAQALARAGVTEIEAGTPAMGNE 68 P+Q+ + P VLNDTTLRDGEQAPGVAF+T EK+AIA+ALARAGV EIEAGTPAMG + Sbjct: 11 PDQSCGFQSAPIVLNDTTLRDGEQAPGVAFSTAEKVAIARALARAGVPEIEAGTPAMGVD 70 Query: 69 EITAIHAIVEAELPLTTIGWCRMREADIDAAIEAKVSMVNVSIPSSDIQIAAKLGGRRDL 128 EI AI AIVEA LPLTTI WCRMR D+DAA++A V+MVNVS+P SD+QIAAKLGG+R Sbjct: 71 EIAAIRAIVEAGLPLTTIAWCRMRTEDVDAALKAGVAMVNVSVPVSDVQIAAKLGGKRSN 130 Query: 129 ALEQVKRVVGYARERGLEVAVGGEDSSRADIDFLIRLIAAAKSAGARRFRIADTLSVLDP 188 A+E VKRVVGYAR+RGL+VAVGGEDSSRAD +FL +IA AK++GARRFRIADTLSVLDP Sbjct: 131 AIETVKRVVGYARDRGLDVAVGGEDSSRADPEFLAEVIATAKASGARRFRIADTLSVLDP 190 Query: 189 DTTSALVGNLRATTDLELEFHGHDDLGLATANTLSAIKAGASHASVTVIGLGERAGNAPL 248 ++ AL+ LRA+TDLELEFHGHDDLGLATANTL+A++AGA+HASVTVIGLGERAGNAPL Sbjct: 191 FSSHALLATLRASTDLELEFHGHDDLGLATANTLAALRAGATHASVTVIGLGERAGNAPL 250 Query: 249 EEVAVALKQLYRRETGIILPELEKVAAVVAAAAARAIPLNKAIVGEHIFTHESGIHVDGL 308 EEVAVALKQLY R+TGI+L EL VA +VA AAAR IPLNKAIVGEH+FTHESGIHVDGL Sbjct: 251 EEVAVALKQLYGRDTGIVLSELGNVADLVATAAARTIPLNKAIVGEHVFTHESGIHVDGL 310 Query: 309 LKDQRTYQSLDPVLLGRRNSFVIGKHSGLSAITALLNELQLVASADQARQILTQVRKHAI 368 LKDQRTYQSLDP L GR N VIGKHSGLSAIT+ L +L L A+AD+A+ IL +VR +A+ Sbjct: 311 LKDQRTYQSLDPNLFGRSNRIVIGKHSGLSAITSSLAKLDLPATADEAQGILAKVRHYAV 370 Query: 369 KHKVPVERETVAAIWRDV 386 HK PV ET+ AIWR+V Sbjct: 371 THKGPVGNETLIAIWREV 388 >ref|YP_001207285.1| homocitrate synthase [Bradyrhizobium sp. ORS 278] emb|CAL79068.1| homocitrate synthase [Bradyrhizobium sp. ORS 278] Length = 379 Score = 558 bits (1438), Expect = e-157, Method: Compositional matrix adjust. Identities = 296/373 (79%), Positives = 333/373 (89%), Gaps = 2/373 (0%) Query: 21 VLNDTTLRDGEQAPGVAFTTEEKLAIAQALARAGVTEIEAGTPAMGNEEITAIHAIVEAE 80 +LNDTTLRDGEQAPGVAF EK+AIA+ALARAGV EIEAGTPAMG +EI AI AIVEA Sbjct: 5 ILNDTTLRDGEQAPGVAFALTEKVAIARALARAGVPEIEAGTPAMGADEIAAIRAIVEAG 64 Query: 81 LPLTTIGWCRMREADIDAAIEAKVSMVNVSIPSSDIQIAAKLGGRRDLALEQVKRVVGYA 140 LP T IGWCRMREAD+DAA+ A VSMVNVSIP+SD+QIAAKLGG R +ALE +KRVV YA Sbjct: 65 LPATIIGWCRMREADVDAAVAAGVSMVNVSIPTSDVQIAAKLGGGRSVALELLKRVVSYA 124 Query: 141 RERGLEVAVGGEDSSRADIDFLIRLIAAAKSAGARRFRIADTLSVLDPDTTSALVGNLRA 200 + RGL+VAVGGEDSSRAD+ FL +IA AK+ GARRFR+ADTLSVLDPD TSALVG LRA Sbjct: 125 KSRGLDVAVGGEDSSRADVGFLAEVIATAKALGARRFRVADTLSVLDPDATSALVGALRA 184 Query: 201 TTDLELEFHGHDDLGLATANTLSAIKAGASHASVTVIGLGERAGNAPLEEVAVALKQLYR 260 TTDLE+EFHGHDDLGLATANTL+A+KAGA+HASVTVIGLGERAGNAPLEEVAVAL+QLYR Sbjct: 185 TTDLEIEFHGHDDLGLATANTLAAVKAGATHASVTVIGLGERAGNAPLEEVAVALRQLYR 244 Query: 261 RETGIILPELEKVAAVVAAAAARAIPLNKAIVGEHIFTHESGIHVDGLLKDQRTYQSLDP 320 RETGI+L EL+ VA VVAAAAARAIPLNKAIVGEH+FTHESGIHVDGLLKDQRTYQ+LDP Sbjct: 245 RETGIVLAELDHVANVVAAAAARAIPLNKAIVGEHVFTHESGIHVDGLLKDQRTYQALDP 304 Query: 321 VLLGRRNSFVIGKHSGLSAITALLNELQLVASADQARQILTQVRKHAIKHKVPVERETVA 380 +L GR N VIGKHSGLSAIT+LL++L+L ASADQA++IL +VRKHA+ HK PV +E VA Sbjct: 305 MLFGRSNRIVIGKHSGLSAITSLLSDLRLPASADQAQRILARVRKHAVAHKGPVPKEAVA 364 Query: 381 AIWRDVCGYLSPH 393 AIWR+VC + PH Sbjct: 365 AIWREVCDH--PH 375