BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0045.0035.p (237 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_768410.1| molybdenum processing protein [Bradyrhizobium j... 322 2e-86 ref|YP_001207287.1| putative nitrogen fixation protein nifQ [Bra... 272 3e-71 ref|YP_001526360.1| NifQ protein [Azorhizobium caulinodans ORS 5... 261 4e-68 ref|YP_001241727.1| putative nitrogen fixation protein nifQ [Bra... 258 4e-67 ref|NP_949945.1| nitrogen fixation protein NifQ [Rhodopseudomona... 255 4e-66 >ref|NP_768410.1| molybdenum processing protein [Bradyrhizobium japonicum USDA 110] gb|AAG60755.1|AF322012_60 NifQ [Bradyrhizobium japonicum] dbj|BAC47035.1| molybdenum processing protein [Bradyrhizobium japonicum USDA 110] Length = 272 Score = 322 bits (826), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 159/228 (69%), Positives = 182/228 (79%), Gaps = 1/228 (0%) Query: 1 MPKANFHPFAAVCA-DAGSEVQRGIATYRALTGVPPEEADITTDSNFDCHVLASILAAAS 59 M + + PF CA DA S++ +GI+TYR LTG P ADI DSN D H LASILAAA+ Sbjct: 15 MSEPHVLPFTTACAADANSQLHKGISTYRLLTGEHPANADIAIDSNLDRHALASILAAAT 74 Query: 60 MDGGPLPEKAGLSGHELAALLDHHFPSIGVKVSEQLLAFKCDENDEIAMVRDLLLKQRST 119 MDGG L EK GLSG ELA LL+ HF G++ EQ FK +E++EIAM+RDLLLK RST Sbjct: 75 MDGGCLSEKVGLSGVELAVLLEQHFLPTGIRAPEQAAPFKREEDEEIAMLRDLLLKHRST 134 Query: 120 EGRIGGWLAAMIARRAIEPNHLWEDLGLRNRGELSRLLSRHFAPLAARNNNNMRWKRFFY 179 EG IG WLAAMIARRA+EP+HLWE LGLR+RGELS ++SRHFAPLAA N NNMRWKRFFY Sbjct: 135 EGDIGRWLAAMIARRAMEPDHLWEALGLRDRGELSLVMSRHFAPLAASNVNNMRWKRFFY 194 Query: 180 RSLCEDEGLVMCTTPVCTQCSDFNLCFGEESGESRMAERRRDVLLQTA 227 R LCEDEGL MCTTPVC QC++FN+CFGEESGESRMAERRRD+LLQ A Sbjct: 195 RMLCEDEGLAMCTTPVCNQCNEFNICFGEESGESRMAERRRDLLLQAA 242 >ref|YP_001207287.1| putative nitrogen fixation protein nifQ [Bradyrhizobium sp. ORS 278] emb|CAL79070.1| putative nitrogen fixation protein nifQ [Bradyrhizobium sp. ORS 278] Length = 241 Score = 272 bits (696), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 139/207 (67%), Positives = 157/207 (75%), Gaps = 2/207 (0%) Query: 23 GIATYRALTGVPPEEADITTDSNFDCHVLASILAAASMDGGPLPEKAGLSGHELAALLDH 82 G YR LTG P EA I D NFD HV+ASILA ++M+ G L E+AGLS EL ALL Sbjct: 30 GRQIYRLLTGNDPAEAVIDDDFNFDRHVIASILAVSAMEHGALAERAGLSTVELIALLAQ 89 Query: 83 HFPSIGVKVSEQLL--AFKCDENDEIAMVRDLLLKQRSTEGRIGGWLAAMIARRAIEPNH 140 FP+ + + + A ++DEIAMVRDLL QRST+G I WLAAM+ARRA+EPNH Sbjct: 90 LFPAAAIDSTWLPINGAAPAPDDDEIAMVRDLLAAQRSTDGDISRWLAAMVARRAMEPNH 149 Query: 141 LWEDLGLRNRGELSRLLSRHFAPLAARNNNNMRWKRFFYRSLCEDEGLVMCTTPVCTQCS 200 LWEDLGLR R ELSRLL RHFAPLA+RN NMRWKRFFYR LCED+G VMCTTPVCTQC+ Sbjct: 150 LWEDLGLRERSELSRLLMRHFAPLASRNVRNMRWKRFFYRMLCEDDGFVMCTTPVCTQCN 209 Query: 201 DFNLCFGEESGESRMAERRRDVLLQTA 227 DF LCFGEESGESRMAERRR+V LQ A Sbjct: 210 DFALCFGEESGESRMAERRREVALQEA 236 >ref|YP_001526360.1| NifQ protein [Azorhizobium caulinodans ORS 571] dbj|BAF75942.1| putative nitrogen fixation protein [Azorhizobium caulinodans ORS 571] dbj|BAF89442.1| NifQ protein [Azorhizobium caulinodans ORS 571] Length = 238 Score = 261 bits (668), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 130/215 (60%), Positives = 157/215 (73%), Gaps = 3/215 (1%) Query: 11 AVCADAGSEVQRGIATYRALTGVPPEEADITTDSNFDCHVLASILAAASMDGGPLPEKAG 70 A CA S + A YR L G P A + + FD HVLA+ILA ++ +GGP+ + G Sbjct: 21 AACAGQASPLPSAGAIYRRLIGCAPAHALVGDTAAFDRHVLAAILAVSASEGGPVASRCG 80 Query: 71 LSGHELAALLDHHFPSIG-VKVSEQLLAFKCDENDEIAMVRDLLLKQRSTEGRIGGWLAA 129 L+ HE++ LL FP++G + S Q A DE E AMVRDLLL QRS + ++GGWLAA Sbjct: 81 LAAHEISDLLHRFFPAVGDLGASWQAHASPLDE--ESAMVRDLLLAQRSADPQVGGWLAA 138 Query: 130 MIARRAIEPNHLWEDLGLRNRGELSRLLSRHFAPLAARNNNNMRWKRFFYRSLCEDEGLV 189 M+ARRA+EPNHLWEDLGLR R EL+RL++RHFAPLA RN NMRWKRFFYRSLCED+G V Sbjct: 139 MLARRAMEPNHLWEDLGLRARDELTRLMNRHFAPLAGRNTRNMRWKRFFYRSLCEDDGFV 198 Query: 190 MCTTPVCTQCSDFNLCFGEESGESRMAERRRDVLL 224 MC TPVCT+C DF LCFG+ESGESRMAERRR + L Sbjct: 199 MCATPVCTECGDFTLCFGDESGESRMAERRRSIAL 233 >ref|YP_001241727.1| putative nitrogen fixation protein nifQ [Bradyrhizobium sp. BTAi1] gb|ABQ37821.1| putative nitrogen fixation protein nifQ [Bradyrhizobium sp. BTAi1] Length = 245 Score = 258 bits (660), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 136/207 (65%), Positives = 155/207 (74%), Gaps = 2/207 (0%) Query: 21 QRGIATYRALTGVPPEEADITTDSNFDCHVLASILAAASMDGGPLPEKAGLSGHELAALL 80 RG YR LTGV P++A I D++FD HV+ASILA A+M+ G L E+AGLS EL LL Sbjct: 31 HRGRQIYRLLTGVDPDDARIDDDASFDRHVIASILAVAAMEHGTLAERAGLSTIELITLL 90 Query: 81 DHHFPSIGVKVSEQLL--AFKCDENDEIAMVRDLLLKQRSTEGRIGGWLAAMIARRAIEP 138 FP+ + S + A ++DEI MVRDLL QRST G WLAAM+ARRA+EP Sbjct: 91 AQLFPAASIDSSWLPINGAAPAPDDDEITMVRDLLAAQRSTPGDTSRWLAAMVARRAMEP 150 Query: 139 NHLWEDLGLRNRGELSRLLSRHFAPLAARNNNNMRWKRFFYRSLCEDEGLVMCTTPVCTQ 198 NHLWEDLGLR R ELSRLL RHFAPLA+RN NMRWKRFFYR LCED+G VMCTTPVCTQ Sbjct: 151 NHLWEDLGLRERSELSRLLMRHFAPLASRNTRNMRWKRFFYRMLCEDDGFVMCTTPVCTQ 210 Query: 199 CSDFNLCFGEESGESRMAERRRDVLLQ 225 C+DF LCFGEE GESRMAERRR+V LQ Sbjct: 211 CNDFQLCFGEEGGESRMAERRREVALQ 237 >ref|NP_949945.1| nitrogen fixation protein NifQ [Rhodopseudomonas palustris CGA009] emb|CAE30051.1| putative nitrogen fixation protein nifQ [Rhodopseudomonas palustris CGA009] Length = 236 Score = 255 bits (651), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 127/202 (62%), Positives = 150/202 (74%), Gaps = 1/202 (0%) Query: 26 TYRALTGVPPEEADITTDSNFDCHVLASILAAASMDGGPLPEKAGLSGHELAALLDHHFP 85 YRALTG P EA I D FD HVLASIL+ A + G + E +GL+ + AAL+ FP Sbjct: 33 VYRALTGCTPAEAQIDDDRAFDRHVLASILSVAVTEPGSITESSGLTADDFAALIVGWFP 92 Query: 86 SIGVKVSEQLLAFKCDENDEIAMVRDLLLKQRSTEGRIGGWLAAMIARRAIEPNHLWEDL 145 + V +S L + DE++E AMVRDLLLK RST G +G WLAAM+ARRA++P HLWEDL Sbjct: 93 HVSVLLS-VLAVGEHDEDEEAAMVRDLLLKHRSTSGEVGRWLAAMVARRAMQPEHLWEDL 151 Query: 146 GLRNRGELSRLLSRHFAPLAARNNNNMRWKRFFYRSLCEDEGLVMCTTPVCTQCSDFNLC 205 GLR+R ELSRLL RHF PLA N NMRWKRFFYR LCED+G+VMC+TPVC+QC DF C Sbjct: 152 GLRSRAELSRLLMRHFEPLARDNTRNMRWKRFFYRKLCEDDGMVMCSTPVCSQCGDFAEC 211 Query: 206 FGEESGESRMAERRRDVLLQTA 227 FGEESGESRMA RRR+V L+ A Sbjct: 212 FGEESGESRMAIRRREVELRAA 233