BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0045.0031.p         (71 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_768405.1| ferredoxin [Bradyrhizobium japonicum USDA 110] ...   128   3e-28
ref|YP_001207292.1| ferredoxin, 2Fe-2S [Bradyrhizobium sp. ORS 2...   119   2e-25
ref|YP_001241731.1| ferredoxin, 2Fe-2S [Bradyrhizobium sp. BTAi1...   119   2e-25
ref|YP_004677423.1| Ferredoxin, 2Fe-2S (AaFd4) [Hyphomicrobium s...   117   5e-25
ref|YP_003450495.1| 2Fe-2S ferredoxin [Azospirillum sp. B510] >g...   102   1e-20

>ref|NP_768405.1| ferredoxin [Bradyrhizobium japonicum USDA 110]
 gb|AAG60751.1|AF322012_56 Fer2 [Bradyrhizobium japonicum]
 dbj|BAC47030.1| ferredoxin [Bradyrhizobium japonicum USDA 110]
          Length = 115

 Score =  128 bits (321), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 58/71 (81%), Positives = 64/71 (90%)

Query: 1   MGKAIEAQDLTDVGFTVTGCLGFCNSGPLMVVYPDGIWYRATTPEDVDEIVDSHLKQGKR 60
           MGKAIEAQ L D+GF   GCLGFCNSGPL+VVYPDG+WYRATTPEDVDEIV SHLK G+R
Sbjct: 45  MGKAIEAQGLDDIGFATAGCLGFCNSGPLLVVYPDGVWYRATTPEDVDEIVISHLKHGQR 104

Query: 61  VDRLVMVLRRS 71
           VDRLV+VL+RS
Sbjct: 105 VDRLVIVLKRS 115


>ref|YP_001207292.1| ferredoxin, 2Fe-2S [Bradyrhizobium sp. ORS 278]
 emb|CAL79075.1| Ferredoxin, 2Fe-2S (AaFd4) [Bradyrhizobium sp. ORS 278]
          Length = 120

 Score =  119 bits (297), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 53/70 (75%), Positives = 60/70 (85%)

Query: 1   MGKAIEAQDLTDVGFTVTGCLGFCNSGPLMVVYPDGIWYRATTPEDVDEIVDSHLKQGKR 60
           + K IEAQ LTDVG T  GC GFC++GP+MVVYPDGIWYR T PED+DEIV+SH KQGKR
Sbjct: 51  LTKTIEAQRLTDVGVTAAGCFGFCSAGPMMVVYPDGIWYRPTKPEDIDEIVESHFKQGKR 110

Query: 61  VDRLVMVLRR 70
           VDRLVMVL+R
Sbjct: 111 VDRLVMVLKR 120


>ref|YP_001241731.1| ferredoxin, 2Fe-2S [Bradyrhizobium sp. BTAi1]
 gb|ABQ37825.1| Ferredoxin, 2Fe-2S (AaFd4) [Bradyrhizobium sp. BTAi1]
          Length = 120

 Score =  119 bits (297), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 52/70 (74%), Positives = 60/70 (85%)

Query: 1   MGKAIEAQDLTDVGFTVTGCLGFCNSGPLMVVYPDGIWYRATTPEDVDEIVDSHLKQGKR 60
           + K IEAQ LTD+G T  GC GFC++GP+MVVYPDGIWYR T PED+DEIV+SH KQGKR
Sbjct: 51  LTKTIEAQRLTDIGVTAAGCFGFCSAGPMMVVYPDGIWYRPTKPEDIDEIVESHFKQGKR 110

Query: 61  VDRLVMVLRR 70
           VDRLVMVL+R
Sbjct: 111 VDRLVMVLKR 120


>ref|YP_004677423.1| Ferredoxin, 2Fe-2S (AaFd4) [Hyphomicrobium sp. MC1]
 emb|CCB66857.1| Ferredoxin, 2Fe-2S (AaFd4) [Hyphomicrobium sp. MC1]
          Length = 118

 Score =  117 bits (293), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 51/71 (71%), Positives = 61/71 (85%)

Query: 1   MGKAIEAQDLTDVGFTVTGCLGFCNSGPLMVVYPDGIWYRATTPEDVDEIVDSHLKQGKR 60
           + KA+EA+ L+DVGFT  GCLGFC +GPLMVVYP+GIWYR +T ED+DEIV SH KQGKR
Sbjct: 48  LSKALEAEHLSDVGFTAAGCLGFCRTGPLMVVYPEGIWYRPSTAEDIDEIVQSHFKQGKR 107

Query: 61  VDRLVMVLRRS 71
           VDRLVMVL ++
Sbjct: 108 VDRLVMVLSKN 118


>ref|YP_003450495.1| 2Fe-2S ferredoxin [Azospirillum sp. B510]
 dbj|BAI73951.1| 2Fe-2S ferredoxin [Azospirillum sp. B510]
          Length = 110

 Score =  102 bits (255), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 46/70 (65%), Positives = 56/70 (80%)

Query: 1   MGKAIEAQDLTDVGFTVTGCLGFCNSGPLMVVYPDGIWYRATTPEDVDEIVDSHLKQGKR 60
           + + I+ Q LTD+G  +TGCLGFC++GPLMVVYP+GIWYR  TPED+DEIVDSHL     
Sbjct: 41  LDQKIQGQGLTDIGMAMTGCLGFCSAGPLMVVYPEGIWYRPETPEDIDEIVDSHLVNDTP 100

Query: 61  VDRLVMVLRR 70
           V+RLVMVL R
Sbjct: 101 VERLVMVLTR 110