BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0045.0027.p         (89 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001415035.1| hypothetical protein Xaut_0119 [Xanthobacter...   104   4e-21
ref|YP_001207306.1| hypothetical protein BRADO5412 [Bradyrhizobi...   101   3e-20
ref|YP_001241744.1| hypothetical protein BBta_5896 [Bradyrhizobi...   100   1e-19
ref|YP_001526338.1| hypothetical protein AZC_3422 [Azorhizobium ...    99   2e-19
ref|YP_534307.1| hypothetical protein RPC_4465 [Rhodopseudomonas...    95   3e-18

>ref|YP_001415035.1| hypothetical protein Xaut_0119 [Xanthobacter autotrophicus Py2]
 gb|ABS65378.1| conserved hypothetical protein [Xanthobacter autotrophicus Py2]
          Length = 87

 Score =  104 bits (260), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 48/87 (55%), Positives = 62/87 (71%)

Query: 1  MALTAEELIEIEGLLAVDGADMGPLVELRRRFPQLACVRCDASDVTDQPFRRFPRFDLHL 60
          MAL+  +L EIE LL  + A      ELRRRFP L+  +CDASDVT++PFR +  +D+HL
Sbjct: 1  MALSDSDLTEIEQLLTGEAASGPVFAELRRRFPALSWTQCDASDVTEEPFRTYSTYDIHL 60

Query: 61 LDGSDHCVQITADPKRATGIVLARRNV 87
          LD +DHC  IT DP  ATG++LARR+V
Sbjct: 61 LDTADHCAHITLDPASATGVILARRSV 87


>ref|YP_001207306.1| hypothetical protein BRADO5412 [Bradyrhizobium sp. ORS 278]
 emb|CAL79089.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278]
          Length = 86

 Score =  101 bits (252), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 48/86 (55%), Positives = 60/86 (69%)

Query: 1  MALTAEELIEIEGLLAVDGADMGPLVELRRRFPQLACVRCDASDVTDQPFRRFPRFDLHL 60
          MAL  +EL EI  +L    A      ELRRRFP+L   RCDASDVT+ PFR +P FDLHL
Sbjct: 1  MALAEQELNEIAQVLEQPDAGSAAFGELRRRFPKLVLTRCDASDVTEPPFRSYPAFDLHL 60

Query: 61 LDGSDHCVQITADPKRATGIVLARRN 86
          LD S+HC  +T DP +ATG++LA+R+
Sbjct: 61 LDASEHCAGVTDDPSKATGLILAKRS 86


>ref|YP_001241744.1| hypothetical protein BBta_5896 [Bradyrhizobium sp. BTAi1]
 gb|ABQ37838.1| hypothetical protein BBta_5896 [Bradyrhizobium sp. BTAi1]
          Length = 86

 Score = 99.8 bits (247), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 49/86 (56%), Positives = 59/86 (68%)

Query: 1  MALTAEELIEIEGLLAVDGADMGPLVELRRRFPQLACVRCDASDVTDQPFRRFPRFDLHL 60
          MAL  +EL EI  +L    A      ELRRRFP+LA  RCDASDVT+ PFR +  FDLHL
Sbjct: 1  MALAEQELNEIAQVLERPDAGSMAFGELRRRFPKLALTRCDASDVTEAPFRSYAAFDLHL 60

Query: 61 LDGSDHCVQITADPKRATGIVLARRN 86
          LD SDHC  +T DP +ATG++LA+R 
Sbjct: 61 LDASDHCAGVTDDPAKATGLILAKRG 86


>ref|YP_001526338.1| hypothetical protein AZC_3422 [Azorhizobium caulinodans ORS 571]
 dbj|BAF89420.1| hypothetical protein AZC_3422 [Azorhizobium caulinodans ORS 571]
          Length = 89

 Score = 99.0 bits (245), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 44/87 (50%), Positives = 61/87 (70%)

Query: 1  MALTAEELIEIEGLLAVDGADMGPLVELRRRFPQLACVRCDASDVTDQPFRRFPRFDLHL 60
          MAL   +L EIE +L+      G +  LR   P L+   CDASD++D+PFR +P +++HL
Sbjct: 1  MALAENDLAEIEKILSAPDNGSGVIATLRGLLPHLSWTGCDASDMSDEPFRTYPAYEVHL 60

Query: 61 LDGSDHCVQITADPKRATGIVLARRNV 87
          LD +DHCVQ+T+DP RATG+VLA+R V
Sbjct: 61 LDTADHCVQLTSDPARATGVVLAKRKV 87


>ref|YP_534307.1| hypothetical protein RPC_4465 [Rhodopseudomonas palustris BisB18]
 gb|ABD89988.1| conserved hypothetical protein [Rhodopseudomonas palustris
          BisB18]
          Length = 90

 Score = 95.1 bits (235), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 47/89 (52%), Positives = 64/89 (71%), Gaps = 1/89 (1%)

Query: 1  MALTAEELIEIEGLLAVDGADMGPLVELRRRFPQLACVRCDASDVTDQ-PFRRFPRFDLH 59
          MAL+AEEL EI  LL    AD   + ELRR+FP+L+  RCDASD+ D+  FR +P FDL+
Sbjct: 1  MALSAEELSEIGALLGAPEADPQIVAELRRQFPKLSLTRCDASDMADETAFREYPLFDLY 60

Query: 60 LLDGSDHCVQITADPKRATGIVLARRNVA 88
          L+DG +HC ++T+DP RATG+V+    +A
Sbjct: 61 LVDGMEHCWKLTSDPARATGLVVVPHRLA 89