BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0045.0022.p (518 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001526330.1| nitrogenase cofactor biosynthesis protein [A... 886 0.0 ref|YP_004677442.1| FeMo cofactor biosynthesis protein nifB [Hyp... 883 0.0 ref|YP_001241752.1| nitrogenase FeMo cofactor biosynthesis prote... 874 0.0 ref|YP_001415027.1| nitrogenase cofactor biosynthesis protein Ni... 873 0.0 ref|ZP_08867983.1| nitrogenase cofactor biosynthesis protein [Az... 871 0.0 >ref|YP_001526330.1| nitrogenase cofactor biosynthesis protein [Azorhizobium caulinodans ORS 571] dbj|BAF89412.1| nitrogenase cofactor biosynthesis protein [Azorhizobium caulinodans ORS 571] Length = 519 Score = 886 bits (2290), Expect = 0.0, Method: Compositional matrix adjust. Identities = 416/509 (81%), Positives = 459/509 (90%), Gaps = 1/509 (0%) Query: 11 AKAAVGASKMVQA-AEHKGCRTSSNSGQASCGSRAGQGDLPTEIWEKVKSHPCYSEEAHH 69 A +A +++QA AEHKGC TS SG+ASCGS AGQGDLPTEIWEKVK+HPCYSEEAHH Sbjct: 11 AGSAPDMGEIMQAIAEHKGCGTSGGSGKASCGSGAGQGDLPTEIWEKVKNHPCYSEEAHH 70 Query: 70 HYARMHVAVAPACNIQCNYCNRKYDCANESRPGVVSEKLTPEQAVKKALAVAATIPQMTV 129 HYARMHVAVAPACNIQCNYCNRKYDCANESRPGVVSEKL+PEQA KK LAVA+TIPQMTV Sbjct: 71 HYARMHVAVAPACNIQCNYCNRKYDCANESRPGVVSEKLSPEQAAKKVLAVASTIPQMTV 130 Query: 130 LGIAGPGDPLANPEKTFKTFELVAKAAPDIKLCLSTNGLSLPDYVDVIAKSKVDHVTITI 189 LGIAGPGDPLANPEKTFKTFEL++K APDIKLCLSTNGL+LPD+VD IA VDHVTITI Sbjct: 131 LGIAGPGDPLANPEKTFKTFELISKTAPDIKLCLSTNGLTLPDHVDTIASYNVDHVTITI 190 Query: 190 NMIDPEIGAKIYPWIFFNHRRYTGLDAARVLADRQLLGLEMLSERGILCKVNSVMIPHIN 249 NM+DPEIGAKIYPW+F+ H+RYTG+DAA++L DRQLLGLEML+ RGIL K+NSVMIP IN Sbjct: 191 NMVDPEIGAKIYPWVFYKHKRYTGIDAAKILTDRQLLGLEMLTARGILTKINSVMIPGIN 250 Query: 250 DGHLVEVNKAVKSRGAFLHNIMPLISAPEYGTVFGLNGQRGPTAQELKALQNACEGEMNM 309 D HLVEVNKAVKSRGAFLHNIMPLISAPE+GTVFGLNGQRGPTAQELKALQ++CEGEMNM Sbjct: 251 DQHLVEVNKAVKSRGAFLHNIMPLISAPEHGTVFGLNGQRGPTAQELKALQDSCEGEMNM 310 Query: 310 MRHCRQCRADAVGLLGEDRSAEFTTDRVMKMDVKYDLEMRKAYQDRVEDERAAKAAASKE 369 MRHCRQCRADAVGLLGEDRSAEFTTD++M M+V YD+E RKAYQ VE+ER AK AA +E Sbjct: 311 MRHCRQCRADAVGLLGEDRSAEFTTDKIMAMEVNYDMEGRKAYQAAVEEERVAKVAAKQE 370 Query: 370 ELGELAGAASEISLLVAVATKGSGLINEHFGHAREFQVYELSTSGTKFVGHRRVDVYCQG 429 EL LAG S+I LLVAVATKGSGLINEHFGHA+EFQVYELST+G KFVGHRRVD+YCQG Sbjct: 371 ELAGLAGEMSDIKLLVAVATKGSGLINEHFGHAKEFQVYELSTAGAKFVGHRRVDLYCQG 430 Query: 430 GDGEKDRLSTIIRGINDCHAVFVAKIGGSPKSNLIKAGIEPVDQYAHELFEKSAISWFRS 489 G GE+D L TIIR INDCHAVFVAKIGG PKS+L+KAGIEPVDQ+AHE EKSAI WF+ Sbjct: 431 GYGEEDSLETIIRAINDCHAVFVAKIGGCPKSDLLKAGIEPVDQFAHEFIEKSAIGWFKD 490 Query: 490 YLDRVKSGEIQHVKRGDASIRQKAVISAA 518 YL +V SGEI+HV RGDA+IRQ A+ISAA Sbjct: 491 YLAKVNSGEIEHVARGDAAIRQGALISAA 519 >ref|YP_004677442.1| FeMo cofactor biosynthesis protein nifB [Hyphomicrobium sp. MC1] emb|CCB66876.1| FeMo cofactor biosynthesis protein nifB [Hyphomicrobium sp. MC1] Length = 519 Score = 883 bits (2281), Expect = 0.0, Method: Compositional matrix adjust. Identities = 409/499 (81%), Positives = 454/499 (90%) Query: 20 MVQAAEHKGCRTSSNSGQASCGSRAGQGDLPTEIWEKVKSHPCYSEEAHHHYARMHVAVA 79 M Q A+HKGC T SG+ASCGS+AGQGDLPTEIWEKVK+HPCYSEEAHHHYARMHVAVA Sbjct: 21 MQQIADHKGCGTHGGSGKASCGSQAGQGDLPTEIWEKVKNHPCYSEEAHHHYARMHVAVA 80 Query: 80 PACNIQCNYCNRKYDCANESRPGVVSEKLTPEQAVKKALAVAATIPQMTVLGIAGPGDPL 139 PACNIQCNYCNRKYDCANESRPGVVSEKLTPEQA KK LAVA+TIPQMTVLGIAGPGDPL Sbjct: 81 PACNIQCNYCNRKYDCANESRPGVVSEKLTPEQAAKKVLAVASTIPQMTVLGIAGPGDPL 140 Query: 140 ANPEKTFKTFELVAKAAPDIKLCLSTNGLSLPDYVDVIAKSKVDHVTITINMIDPEIGAK 199 ANPEKTFKTFEL++K APDIKLCLSTNGL+LPD+VD IA VDHVTITINM+DPEIGAK Sbjct: 141 ANPEKTFKTFELISKTAPDIKLCLSTNGLALPDHVDTIAGFNVDHVTITINMVDPEIGAK 200 Query: 200 IYPWIFFNHRRYTGLDAARVLADRQLLGLEMLSERGILCKVNSVMIPHINDGHLVEVNKA 259 IYPW+F+ H+RYTG++AA++L DRQL GLEML+ERGILCKVNSVMIP IND HLV+VNKA Sbjct: 201 IYPWVFWKHKRYTGVEAAKLLTDRQLQGLEMLTERGILCKVNSVMIPGINDQHLVDVNKA 260 Query: 260 VKSRGAFLHNIMPLISAPEYGTVFGLNGQRGPTAQELKALQNACEGEMNMMRHCRQCRAD 319 VKSRGAFLHNIMPLIS+PE+GT FGL GQRGPTAQELKALQ++CEGEMNMMRHCRQCRAD Sbjct: 261 VKSRGAFLHNIMPLISSPEHGTAFGLTGQRGPTAQELKALQDSCEGEMNMMRHCRQCRAD 320 Query: 320 AVGLLGEDRSAEFTTDRVMKMDVKYDLEMRKAYQDRVEDERAAKAAASKEELGELAGAAS 379 AVGLLGEDRSAEFTTD++M+M+V YDL+ RKAYQ +VE+ER AK AA +EEL LAG S Sbjct: 321 AVGLLGEDRSAEFTTDKIMEMEVDYDLDSRKAYQAKVEEERVAKVAAKQEELASLAGEVS 380 Query: 380 EISLLVAVATKGSGLINEHFGHAREFQVYELSTSGTKFVGHRRVDVYCQGGDGEKDRLST 439 +I LLVAVATKGSGLINEHFGHA+EFQVYELSTSG KFVGHRRVD+YCQGG GE+D L T Sbjct: 381 DIKLLVAVATKGSGLINEHFGHAKEFQVYELSTSGAKFVGHRRVDLYCQGGYGEEDSLET 440 Query: 440 IIRGINDCHAVFVAKIGGSPKSNLIKAGIEPVDQYAHELFEKSAISWFRSYLDRVKSGEI 499 IIR INDCHAVFVAKIGG PKS+L +AGI+PVDQYAHE EKSAI+WF+ YL +VKSGEI Sbjct: 441 IIRAINDCHAVFVAKIGGCPKSDLQRAGIDPVDQYAHEFIEKSAITWFKDYLSKVKSGEI 500 Query: 500 QHVKRGDASIRQKAVISAA 518 +HV+RGDA IRQ A+ +AA Sbjct: 501 EHVQRGDAEIRQGALTAAA 519 >ref|YP_001241752.1| nitrogenase FeMo cofactor biosynthesis protein NifB [Bradyrhizobium sp. BTAi1] gb|ABQ37846.1| Nitrogenase FeMo cofactor biosynthesis protein NifB [Bradyrhizobium sp. BTAi1] Length = 520 Score = 874 bits (2258), Expect = 0.0, Method: Compositional matrix adjust. Identities = 407/502 (81%), Positives = 451/502 (89%) Query: 17 ASKMVQAAEHKGCRTSSNSGQASCGSRAGQGDLPTEIWEKVKSHPCYSEEAHHHYARMHV 76 +S M AEHKGC TS SG+ASCGS AG+ DLP EIWEKVK+HPCYSEEAHHHYARMHV Sbjct: 19 SSVMQTIAEHKGCGTSGGSGKASCGSGAGENDLPPEIWEKVKNHPCYSEEAHHHYARMHV 78 Query: 77 AVAPACNIQCNYCNRKYDCANESRPGVVSEKLTPEQAVKKALAVAATIPQMTVLGIAGPG 136 AVAPACNIQCNYCNRKYDCANESRPGVVSEKLTPEQA KK LAVA+TIPQMTVLGIAGPG Sbjct: 79 AVAPACNIQCNYCNRKYDCANESRPGVVSEKLTPEQAAKKVLAVASTIPQMTVLGIAGPG 138 Query: 137 DPLANPEKTFKTFELVAKAAPDIKLCLSTNGLSLPDYVDVIAKSKVDHVTITINMIDPEI 196 DPLANPEKTFKTFEL+A+ APDIKLCLSTNGL+LPD+VD IA VDHVTITINM+DPEI Sbjct: 139 DPLANPEKTFKTFELIARTAPDIKLCLSTNGLALPDHVDTIAGFNVDHVTITINMVDPEI 198 Query: 197 GAKIYPWIFFNHRRYTGLDAARVLADRQLLGLEMLSERGILCKVNSVMIPHINDGHLVEV 256 GAKIYPW+F+ H+RYTG++AA++L DRQL GLEML+ERGILCKVNSVMIP +ND HLVEV Sbjct: 199 GAKIYPWVFWKHKRYTGVEAAKLLTDRQLQGLEMLTERGILCKVNSVMIPGVNDKHLVEV 258 Query: 257 NKAVKSRGAFLHNIMPLISAPEYGTVFGLNGQRGPTAQELKALQNACEGEMNMMRHCRQC 316 N+AVKSRGAFLHNIMPLIS+PE+GTVFGL GQRGPTAQELKALQ+ CEGEMNMMRHCRQC Sbjct: 259 NRAVKSRGAFLHNIMPLISSPEHGTVFGLTGQRGPTAQELKALQDECEGEMNMMRHCRQC 318 Query: 317 RADAVGLLGEDRSAEFTTDRVMKMDVKYDLEMRKAYQDRVEDERAAKAAASKEELGELAG 376 RADAVGLLGEDRSAEFTTD++M M+V YD++ RKAYQ+ VE ER AK A +EEL LAG Sbjct: 319 RADAVGLLGEDRSAEFTTDKIMAMEVNYDIDSRKAYQEAVESERVAKVVARQEELASLAG 378 Query: 377 AASEISLLVAVATKGSGLINEHFGHAREFQVYELSTSGTKFVGHRRVDVYCQGGDGEKDR 436 +S+I LLVAVATKGSGLINEHFGHA+EFQVYELST+G KFVGHRRVD+YCQGG G++D Sbjct: 379 QSSDIKLLVAVATKGSGLINEHFGHAKEFQVYELSTAGAKFVGHRRVDLYCQGGYGDEDS 438 Query: 437 LSTIIRGINDCHAVFVAKIGGSPKSNLIKAGIEPVDQYAHELFEKSAISWFRSYLDRVKS 496 L T+IR INDCHAVFVAKIGG PKS+L AGIEPVDQ+AHE EKSAI+WF+SYLD+V S Sbjct: 439 LETVIRAINDCHAVFVAKIGGCPKSDLQAAGIEPVDQFAHEFIEKSAIAWFKSYLDKVNS 498 Query: 497 GEIQHVKRGDASIRQKAVISAA 518 GEIQHV RGDA IRQ A+ISAA Sbjct: 499 GEIQHVVRGDAEIRQGALISAA 520 >ref|YP_001415027.1| nitrogenase cofactor biosynthesis protein NifB [Xanthobacter autotrophicus Py2] gb|ABS65370.1| nitrogenase cofactor biosynthesis protein NifB [Xanthobacter autotrophicus Py2] Length = 520 Score = 873 bits (2255), Expect = 0.0, Method: Compositional matrix adjust. Identities = 404/502 (80%), Positives = 453/502 (90%) Query: 17 ASKMVQAAEHKGCRTSSNSGQASCGSRAGQGDLPTEIWEKVKSHPCYSEEAHHHYARMHV 76 A M AEH+GC TS SG+ASCGS AGQGDLPTEIWEKVK+HPCYSEEAHHHYARMHV Sbjct: 19 AEVMQAKAEHQGCGTSGGSGKASCGSSAGQGDLPTEIWEKVKNHPCYSEEAHHHYARMHV 78 Query: 77 AVAPACNIQCNYCNRKYDCANESRPGVVSEKLTPEQAVKKALAVAATIPQMTVLGIAGPG 136 AVAPACNIQCNYCNRKYDCANESRPGVVSEKLTP+QA KK LAVA+TIPQMTVLGIAGPG Sbjct: 79 AVAPACNIQCNYCNRKYDCANESRPGVVSEKLTPQQAAKKVLAVASTIPQMTVLGIAGPG 138 Query: 137 DPLANPEKTFKTFELVAKAAPDIKLCLSTNGLSLPDYVDVIAKSKVDHVTITINMIDPEI 196 DPLANPEKTF+TFEL+ + APDIKLCLSTNGL+LPD+VD IA VDHVTITINM+DPE+ Sbjct: 139 DPLANPEKTFQTFELINRTAPDIKLCLSTNGLALPDHVDTIAGFNVDHVTITINMVDPEV 198 Query: 197 GAKIYPWIFFNHRRYTGLDAARVLADRQLLGLEMLSERGILCKVNSVMIPHINDGHLVEV 256 GAKIYPW+F+ H+RYTG +AA++L DRQ+LGLEML+ERGILCKVNSVMIP IND HLVEV Sbjct: 199 GAKIYPWVFWKHKRYTGYEAAKLLTDRQMLGLEMLTERGILCKVNSVMIPGINDKHLVEV 258 Query: 257 NKAVKSRGAFLHNIMPLISAPEYGTVFGLNGQRGPTAQELKALQNACEGEMNMMRHCRQC 316 N+AVKSRGAFLHNIMPLISAPE+GTVFGLNGQRGPTAQELKALQ++CEGEMNMMRHCRQC Sbjct: 259 NRAVKSRGAFLHNIMPLISAPEHGTVFGLNGQRGPTAQELKALQDSCEGEMNMMRHCRQC 318 Query: 317 RADAVGLLGEDRSAEFTTDRVMKMDVKYDLEMRKAYQDRVEDERAAKAAASKEELGELAG 376 RADAVGLLGEDRSAEFTTD++M M+V YDL+ RKAYQ VE+ER AK AA +EE+ LAG Sbjct: 319 RADAVGLLGEDRSAEFTTDKIMAMEVNYDLDSRKAYQALVEEERVAKVAAKQEEMEALAG 378 Query: 377 AASEISLLVAVATKGSGLINEHFGHAREFQVYELSTSGTKFVGHRRVDVYCQGGDGEKDR 436 S+I LLVAVATKGSGLINEHFGHA+EFQV+ELST+G KFVGHRRVD+YCQGG GE+D Sbjct: 379 EQSDIKLLVAVATKGSGLINEHFGHAKEFQVWELSTAGAKFVGHRRVDLYCQGGYGEEDS 438 Query: 437 LSTIIRGINDCHAVFVAKIGGSPKSNLIKAGIEPVDQYAHELFEKSAISWFRSYLDRVKS 496 L TIIR INDCHAVFVAKIGG PK++L+KAGIEPVD +AHE EKSAI+WF+ YL++VK+ Sbjct: 439 LETIIRAINDCHAVFVAKIGGCPKADLVKAGIEPVDGFAHEFIEKSAITWFKDYLNKVKT 498 Query: 497 GEIQHVKRGDASIRQKAVISAA 518 GEI H +RGDA IRQ A+I+AA Sbjct: 499 GEIVHAERGDAEIRQGALINAA 520 >ref|ZP_08867983.1| nitrogenase cofactor biosynthesis protein [Azospirillum amazonense Y2] gb|EGY02422.1| nitrogenase cofactor biosynthesis protein [Azospirillum amazonense Y2] Length = 519 Score = 871 bits (2250), Expect = 0.0, Method: Compositional matrix adjust. Identities = 401/499 (80%), Positives = 453/499 (90%) Query: 20 MVQAAEHKGCRTSSNSGQASCGSRAGQGDLPTEIWEKVKSHPCYSEEAHHHYARMHVAVA 79 M Q AEHKGC T SG+ASCGS AGQGDLPTEIWEKVK+HPCYSEEAHHHYARMHVAVA Sbjct: 21 MQQVAEHKGCGTQGGSGKASCGSAAGQGDLPTEIWEKVKNHPCYSEEAHHHYARMHVAVA 80 Query: 80 PACNIQCNYCNRKYDCANESRPGVVSEKLTPEQAVKKALAVAATIPQMTVLGIAGPGDPL 139 PACNIQCNYCNRKYDCANESRPGVVSE+LTPEQA +K LAVA+TIPQMTVLGIAGPGDPL Sbjct: 81 PACNIQCNYCNRKYDCANESRPGVVSERLTPEQAARKVLAVASTIPQMTVLGIAGPGDPL 140 Query: 140 ANPEKTFKTFELVAKAAPDIKLCLSTNGLSLPDYVDVIAKSKVDHVTITINMIDPEIGAK 199 ANP KTFKTFEL+++ APDIKLCLSTNGL+LPD+VD IA+ VDHVTITINM+DPE+GAK Sbjct: 141 ANPAKTFKTFELISQTAPDIKLCLSTNGLALPDHVDTIARYNVDHVTITINMVDPEVGAK 200 Query: 200 IYPWIFFNHRRYTGLDAARVLADRQLLGLEMLSERGILCKVNSVMIPHINDGHLVEVNKA 259 IYPW+++NH+RYTG++AAR+L +RQL GLEML+ERGILCKVNSVMIP +ND HLVEVN+A Sbjct: 201 IYPWVYWNHKRYTGVEAARLLTERQLRGLEMLTERGILCKVNSVMIPGVNDRHLVEVNRA 260 Query: 260 VKSRGAFLHNIMPLISAPEYGTVFGLNGQRGPTAQELKALQNACEGEMNMMRHCRQCRAD 319 VKSRGAFLHNIMPLISAPE+GTVFGL GQRGPTAQELKALQ+ CEGEMNMMRHCRQCRAD Sbjct: 261 VKSRGAFLHNIMPLISAPEHGTVFGLTGQRGPTAQELKALQDDCEGEMNMMRHCRQCRAD 320 Query: 320 AVGLLGEDRSAEFTTDRVMKMDVKYDLEMRKAYQDRVEDERAAKAAASKEELGELAGAAS 379 AVGLLGEDRSAEFTT+++M+M+V YDLE R+AYQ RVE+ER AK AA +EEL LAGA S Sbjct: 321 AVGLLGEDRSAEFTTEKIMEMEVDYDLEGRQAYQARVEEERVAKVAAKQEELATLAGAQS 380 Query: 380 EISLLVAVATKGSGLINEHFGHAREFQVYELSTSGTKFVGHRRVDVYCQGGDGEKDRLST 439 +I+LLVAVATKGSGLINEHFGHA+EFQVYELST+G KFVGHRRVD+YCQGG G++D L T Sbjct: 381 DITLLVAVATKGSGLINEHFGHAKEFQVYELSTAGAKFVGHRRVDLYCQGGFGDEDSLQT 440 Query: 440 IIRGINDCHAVFVAKIGGSPKSNLIKAGIEPVDQYAHELFEKSAISWFRSYLDRVKSGEI 499 +IR INDCHAVFVAKIGG PK++L+ AGIEPVDQYAHE EKSAI+WF+ YL +V +GE+ Sbjct: 441 VIRAINDCHAVFVAKIGGCPKADLLGAGIEPVDQYAHEFIEKSAIAWFKGYLGKVAAGEL 500 Query: 500 QHVKRGDASIRQKAVISAA 518 H RGDA+IRQ A+I AA Sbjct: 501 VHTPRGDAAIRQGALIVAA 519