BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0045.0019.p (401 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_768396.1| nitrogenase metalloclusters biosynthesis protei... 642 0.0 ref|YP_001207317.1| cysteine desulfurase [Bradyrhizobium sp. ORS... 526 e-147 ref|YP_001415024.1| class V aminotransferase [Xanthobacter autot... 513 e-143 ref|YP_004677445.1| Cysteine desulfurase [Hyphomicrobium sp. MC1... 501 e-139 ref|YP_001241755.1| cysteine desulfurase [Bradyrhizobium sp. BTA... 499 e-139 >ref|NP_768396.1| nitrogenase metalloclusters biosynthesis protein [Bradyrhizobium japonicum USDA 110] sp|P37030.2|NIFS_BRAJA RecName: Full=Cysteine desulfurase; AltName: Full=Nitrogenase metalloclusters biosynthesis protein NifS gb|AAG60742.1|AF322012_47 NifS [Bradyrhizobium japonicum] dbj|BAC47021.1| nitrogenase metalloclusters biosynthesis protein [Bradyrhizobium japonicum USDA 110] Length = 393 Score = 642 bits (1656), Expect = 0.0, Method: Compositional matrix adjust. Identities = 312/384 (81%), Positives = 344/384 (89%) Query: 3 DQVPIYLDNNATTRTDPSVVQAMLPYFTERFGNASSSHAFGGEAATALKQARRSLQDLLG 62 ++ PIYLDNNATTRTDPSVVQ MLP+FTE+FGNASS+HAFG EAA A++QARRSL LLG Sbjct: 4 NRAPIYLDNNATTRTDPSVVQTMLPFFTEQFGNASSAHAFGNEAAIAVRQARRSLSGLLG 63 Query: 63 NADDHEIIFTSGGTEANNAAILSALASQEGRDEIVTTSVEHSAILSLVEQLAPKGVKTHI 122 +A DHEI+FTSGGTEANNAAILSALA+QEGRDE+VTTSVEHSA+L+L EQLA +GVKT I Sbjct: 64 SAYDHEIVFTSGGTEANNAAILSALATQEGRDEVVTTSVEHSAVLALTEQLAARGVKTRI 123 Query: 123 IPVDSRGRLDIEAFRCALGPRTAIVSTMWANNETGTIFPVEFLAGLTREAGALFHTDAVQ 182 I VD+ GRLDIEAFRCALGPRTAI S MWANNETGTIFPV+ LAG TREAGALFHTDAVQ Sbjct: 124 IAVDACGRLDIEAFRCALGPRTAIASVMWANNETGTIFPVKCLAGWTREAGALFHTDAVQ 183 Query: 183 AVGKERVDLKDSAIDMLSLSAHKLHGPKGIGALYLRKGTKFRPLIWGGSQERRRRGGTEN 242 A+GK R++LKDS IDMLSLSAHKLHGPKG+GALYLRKGTKF+PLI GGSQER RR GTEN Sbjct: 184 AIGKVRLNLKDSTIDMLSLSAHKLHGPKGVGALYLRKGTKFQPLICGGSQERGRRAGTEN 243 Query: 243 IPGIVGLGKAAELAVERLEPERVRIGALRDRLEQGILRSGECAVLGDASNRLTNTANIAF 302 IPGIVGLGKAAELA ERLEPER+RIGALRDRLEQGILR+GEC VLGD NRL NT NIAF Sbjct: 244 IPGIVGLGKAAELAAERLEPERIRIGALRDRLEQGILRNGECVVLGDIRNRLANTTNIAF 303 Query: 303 DDLESEAIVHHLNRAGIAVSLGAACKSGSMEPSHVLRAMRVPERSMRGAVRFSLSRETSV 362 D LE EAI H LNRAGIAVSLG+AC+SGSM+PSHVLRAM+VP M GAVRFSLSRETS+ Sbjct: 304 DHLEGEAIAHRLNRAGIAVSLGSACRSGSMQPSHVLRAMQVPAWRMHGAVRFSLSRETSL 363 Query: 363 AEVDEVVCVLSDIVARLRANLRGS 386 AEVDE VC +SDIV R+RA+ R + Sbjct: 364 AEVDEAVCAVSDIVTRMRASSRAT 387 >ref|YP_001207317.1| cysteine desulfurase [Bradyrhizobium sp. ORS 278] emb|CAL79100.1| cysteine desulfurase (Nitrogenase metalloclusters biosynthesis protein nifS) [Bradyrhizobium sp. ORS 278] Length = 404 Score = 526 bits (1356), Expect = e-147, Method: Compositional matrix adjust. Identities = 263/377 (69%), Positives = 308/377 (81%), Gaps = 2/377 (0%) Query: 6 PIYLDNNATTRTDPSVVQAMLPYFTERFGNASSSHAFGGEAATALKQARRSLQDLLGNAD 65 P+YLDNNATTR DP VV AMLP+FT++FGNASSSHAFG E A A++QAR+SLQ LLG A Sbjct: 3 PVYLDNNATTRVDPEVVAAMLPFFTDQFGNASSSHAFGSEVAGAVRQARKSLQALLGAAF 62 Query: 66 DHEIIFTSGGTEANNAAILSALASQEGRDEIVTTSVEHSAILSLVEQLAPK-GVKTHIIP 124 DHEI++TSGGTE++N AILSAL +Q+GRDEIVTT+VEH AIL+LVE L K GV H+I Sbjct: 63 DHEIVYTSGGTESDNTAILSALETQDGRDEIVTTAVEHPAILTLVEHLRDKRGVTVHLIG 122 Query: 125 VDSRGRLDIEAFRCALGPRTAIVSTMWANNETGTIFPVEFLAGLTREAGALFHTDAVQAV 184 VD+ GRLD++A++ ALGPRTAI S MWANNETGT+ P+ LA L +AGALFHTDAVQAV Sbjct: 123 VDAAGRLDVDAYKRALGPRTAIASVMWANNETGTLNPIPELAKLAHDAGALFHTDAVQAV 182 Query: 185 GKERVDLKDSAIDMLSLSAHKLHGPKGIGALYLRKGTKFRPLIWGGSQERRRRGGTENIP 244 GK +DLK +A+DMLSLS HKLHGPKGIGALY+RKGT F PL+ GG QERRRRGGTEN+P Sbjct: 183 GKIAIDLKATAVDMLSLSGHKLHGPKGIGALYVRKGTPFAPLVRGGPQERRRRGGTENVP 242 Query: 245 GIVGLGKAAELAVERLEPERVRIGALRDRLEQGILRS-GECAVLGDASNRLTNTANIAFD 303 I+GLGKAAELA + L E+ R+ ALRDRLEQGI + G CA+LGD + RL NTANIAF Sbjct: 243 AIIGLGKAAELAAKHLADEQGRVRALRDRLEQGITQGVGHCAMLGDVAQRLPNTANIAFQ 302 Query: 304 DLESEAIVHHLNRAGIAVSLGAACKSGSMEPSHVLRAMRVPERSMRGAVRFSLSRETSVA 363 LE E IV LN+AGIA SLG+AC SGSMEPSHVLRAM VP +RGAVRFSLSR+T+ Sbjct: 303 HLEGEPIVMRLNQAGIAASLGSACASGSMEPSHVLRAMNVPPELLRGAVRFSLSRDTTDD 362 Query: 364 EVDEVVCVLSDIVARLR 380 ++D V+ VL DIV RLR Sbjct: 363 DIDGVLAVLPDIVGRLR 379 >ref|YP_001415024.1| class V aminotransferase [Xanthobacter autotrophicus Py2] gb|ABS65367.1| aminotransferase class V [Xanthobacter autotrophicus Py2] Length = 400 Score = 513 bits (1322), Expect = e-143, Method: Compositional matrix adjust. Identities = 253/378 (66%), Positives = 305/378 (80%), Gaps = 2/378 (0%) Query: 6 PIYLDNNATTRTDPSVVQAMLPYFTERFGNASSSHAFGGEAATALKQARRSLQDLLGNAD 65 P+YLDNNATTRTDP+VV+AMLP+F+E FGNASS+HAFG ALK+AR+ LQ LLG A Sbjct: 3 PVYLDNNATTRTDPAVVEAMLPFFSEHFGNASSTHAFGEHVGEALKKARKQLQALLGAAF 62 Query: 66 DHEIIFTSGGTEANNAAILSALASQEGRDEIVTTSVEHSAILSLVEQL-APKGVKTHIIP 124 DHEII+TSGGTEA+NAAILSAL +QEGRDEIVTT+VEH AIL+LV L +G+K H+I Sbjct: 63 DHEIIYTSGGTEADNAAILSALETQEGRDEIVTTTVEHPAILTLVAHLEKTRGIKVHLIG 122 Query: 125 VDSRGRLDIEAFRCALGPRTAIVSTMWANNETGTIFPVEFLAGLTREAGALFHTDAVQAV 184 VD GRLD++A+ AL P+TA+VS MWANNETGT+FPV LA + GALFHTDAVQAV Sbjct: 123 VDRHGRLDLDAYAKALSPKTALVSVMWANNETGTLFPVAELAEQAKAVGALFHTDAVQAV 182 Query: 185 GKERVDLKDSAIDMLSLSAHKLHGPKGIGALYLRKGTKFRPLIWGGSQERRRRGGTENIP 244 GK +DLK +AIDMLSLS HKLHGPKGIGALY++KG KFRPLI GG QER RRGGTEN+P Sbjct: 183 GKVAIDLKSTAIDMLSLSGHKLHGPKGIGALYVKKGVKFRPLIRGGHQERGRRGGTENVP 242 Query: 245 GIVGLGKAAELAVERLEPERVRIGALRDRLEQGILRSGECAVL-GDASNRLTNTANIAFD 303 GI+GLG AA+LA++ +E ER R+ ALRDRLEQGIL+ +L GD NRL NTANIAF+ Sbjct: 243 GIIGLGAAADLALQHMEEERTRVKALRDRLEQGILQRVSNTLLNGDGDNRLPNTANIAFE 302 Query: 304 DLESEAIVHHLNRAGIAVSLGAACKSGSMEPSHVLRAMRVPERSMRGAVRFSLSRETSVA 363 L+ EA++H+LN+AG+A S G+AC SGS EPSHVLRAM +P ++ GA+R SLSRE + Sbjct: 303 YLDGEAVLHNLNKAGVAASTGSACTSGSTEPSHVLRAMNLPATALHGALRLSLSRENTGE 362 Query: 364 EVDEVVCVLSDIVARLRA 381 +VD V+ L +IV RLRA Sbjct: 363 DVDRVLEALPEIVTRLRA 380 >ref|YP_004677445.1| Cysteine desulfurase [Hyphomicrobium sp. MC1] emb|CCB66879.1| Cysteine desulfurase [Hyphomicrobium sp. MC1] Length = 402 Score = 501 bits (1289), Expect = e-139, Method: Compositional matrix adjust. Identities = 258/380 (67%), Positives = 295/380 (77%), Gaps = 2/380 (0%) Query: 6 PIYLDNNATTRTDPSVVQAMLPYFTERFGNASSSHAFGGEAATALKQARRSLQDLLGNAD 65 P+YLDNNATTRTDP+VV AMLPYFTE+FGNASS H FG A+K AR +L+ L+G Sbjct: 7 PVYLDNNATTRTDPAVVAAMLPYFTEQFGNASSEHLFGSGLGEAMKDARNNLRALIGAVL 66 Query: 66 DHEIIFTSGGTEANNAAILSALASQEGRDEIVTTSVEHSAILSLVEQLAPKG-VKTHIIP 124 HEIIFTSGGTE++NAAILSAL +Q GRDEIVTT+VEHSAIL+LV L G K HII Sbjct: 67 PHEIIFTSGGTESDNAAILSALETQAGRDEIVTTNVEHSAILTLVTHLERIGRAKVHIIS 126 Query: 125 VDSRGRLDIEAFRCALGPRTAIVSTMWANNETGTIFPVEFLAGLTREAGALFHTDAVQAV 184 VD +GRLD EAF ALGPRTAI S MWANNETGTIFPV+ LA + GALFHTDAVQAV Sbjct: 127 VDRQGRLDEEAFARALGPRTAIASVMWANNETGTIFPVDRLAKMAHSVGALFHTDAVQAV 186 Query: 185 GKERVDLKDSAIDMLSLSAHKLHGPKGIGALYLRKGTKFRPLIWGGSQERRRRGGTENIP 244 GK +DLK S IDMLSLS HKLHGPKGIGALY+RKG KF I GG QER RRGGTEN+P Sbjct: 187 GKMLIDLKSSEIDMLSLSGHKLHGPKGIGALYVRKGVKFASQIRGGHQERGRRGGTENVP 246 Query: 245 GIVGLGKAAELAVERLEPERVRIGALRDRLEQGILR-SGECAVLGDASNRLTNTANIAFD 303 I+GLGKAAELA+ R + E R+ ALRDRLE GILR G C V GD NRL NT+NIAFD Sbjct: 247 SIIGLGKAAELAMSRFDEETTRVRALRDRLEDGILRVGGPCFVNGDKRNRLPNTSNIAFD 306 Query: 304 DLESEAIVHHLNRAGIAVSLGAACKSGSMEPSHVLRAMRVPERSMRGAVRFSLSRETSVA 363 L+ EAI+ H++RAGIA S G+AC SGS EPSHVLRAM VP ++ GA+R SLSR+ + A Sbjct: 307 GLDGEAILTHMSRAGIAASSGSACTSGSTEPSHVLRAMSVPVTALHGAIRLSLSRDNTDA 366 Query: 364 EVDEVVCVLSDIVARLRANL 383 +VD V+ VL I+A+LRA L Sbjct: 367 DVDRVLEVLPGIIAKLRAML 386 >ref|YP_001241755.1| cysteine desulfurase [Bradyrhizobium sp. BTAi1] gb|ABQ37849.1| cysteine desulfurase (Nitrogenase metalloclusters biosynthesis protein nifS) [Bradyrhizobium sp. BTAi1] Length = 404 Score = 499 bits (1285), Expect = e-139, Method: Compositional matrix adjust. Identities = 261/377 (69%), Positives = 308/377 (81%), Gaps = 2/377 (0%) Query: 6 PIYLDNNATTRTDPSVVQAMLPYFTERFGNASSSHAFGGEAATALKQARRSLQDLLGNAD 65 P+YLDNNATTR P+VV AMLP+FT++FGNASSSHAFG E A A++QAR+SLQ LLG A Sbjct: 3 PVYLDNNATTRVAPAVVAAMLPFFTDQFGNASSSHAFGSEVAGAVRQARKSLQALLGAAF 62 Query: 66 DHEIIFTSGGTEANNAAILSALASQEGRDEIVTTSVEHSAILSLVEQLAPK-GVKTHIIP 124 DHEI+FTSGGTE++N A+LSAL +Q+GRDEI+TT+VEH AILSLVE L + GV H+I Sbjct: 63 DHEIVFTSGGTESDNTALLSALETQDGRDEIITTAVEHPAILSLVEHLRDRRGVTVHLIG 122 Query: 125 VDSRGRLDIEAFRCALGPRTAIVSTMWANNETGTIFPVEFLAGLTREAGALFHTDAVQAV 184 VD+ GRLD++A++ ALGPRTAI S MWANNETGT+FP+ LA L +AGALFHTDAVQAV Sbjct: 123 VDAAGRLDLDAYKRALGPRTAIASVMWANNETGTLFPIPELARLAHDAGALFHTDAVQAV 182 Query: 185 GKERVDLKDSAIDMLSLSAHKLHGPKGIGALYLRKGTKFRPLIWGGSQERRRRGGTENIP 244 GK +DLK + +DMLSLS HKLHGPKGIGALY+RKGT F PL+ GG QERRRRGGTEN+P Sbjct: 183 GKIAIDLKSAGVDMLSLSGHKLHGPKGIGALYVRKGTPFAPLVRGGPQERRRRGGTENVP 242 Query: 245 GIVGLGKAAELAVERLEPERVRIGALRDRLEQGILR-SGECAVLGDASNRLTNTANIAFD 303 I+GLGKAAELA L E+ R+ ALRDRLEQGIL+ +G CAVLGD + RL NTANIAF Sbjct: 243 AIIGLGKAAELAAHHLADEQGRVRALRDRLEQGILQGAGHCAVLGDPAQRLPNTANIAFQ 302 Query: 304 DLESEAIVHHLNRAGIAVSLGAACKSGSMEPSHVLRAMRVPERSMRGAVRFSLSRETSVA 363 +E E IV LN+AGIA SLG+AC SGSMEPSHVLRAM V +RGAVRFSLSR+T+ Sbjct: 303 HVEGEPIVMRLNQAGIAASLGSACASGSMEPSHVLRAMNVATDLLRGAVRFSLSRDTTDD 362 Query: 364 EVDEVVCVLSDIVARLR 380 ++D V+ VL DIV RLR Sbjct: 363 DIDRVLQVLPDIVGRLR 379