BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0045.0007.p (223 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_768384.1| nitrogenase molybdenum-iron protein subunit bet... 447 e-124 gb|AAA26326.1| nitrogen fixation protein [Bradyrhizobium japonicum] 445 e-123 sp|P06122.1|NIFK_BRASP RecName: Full=Nitrogenase molybdenum-iron... 424 e-117 ref|YP_004677461.1| nitrogenase molybdenum-iron protein beta cha... 409 e-112 ref|YP_001523955.1| nitrogenase molybdenum-iron protein beta cha... 406 e-111 >ref|NP_768384.1| nitrogenase molybdenum-iron protein subunit beta [Bradyrhizobium japonicum USDA 110] sp|P20621.3|NIFK_BRAJA RecName: Full=Nitrogenase molybdenum-iron protein beta chain; AltName: Full=Dinitrogenase; AltName: Full=Nitrogenase component I gb|AAG60730.1|AF322012_35 NifK [Bradyrhizobium japonicum] dbj|BAC47009.1| nitrogenase molybdenum-iron protein beta chain [Bradyrhizobium japonicum USDA 110] Length = 518 Score = 447 bits (1151), Expect = e-124, Method: Compositional matrix adjust. Identities = 207/223 (92%), Positives = 216/223 (96%) Query: 1 MQQWCTEKTLPFVSEHGQDVVSFNYPVGVSATDDFLVALSRISGKEIPEELARERGRLVD 60 MQQWCTEKTL F +EHGQDV+SFNYPVG+SATDDF+VALSRISGKEIPE+LARERGRLVD Sbjct: 296 MQQWCTEKTLSFAAEHGQDVLSFNYPVGLSATDDFIVALSRISGKEIPEQLARERGRLVD 355 Query: 61 AIADSSAHIHGKKFAIYGDPDLCYGLAAFLLELGAEPTHVLSTNGNKAWQEKMQALFASS 120 AIADSSAH+HGKKFAIYGDPDLCYGLAAFLLELGAEPTHVLSTNGNKAWQEKMQAL ASS Sbjct: 356 AIADSSAHVHGKKFAIYGDPDLCYGLAAFLLELGAEPTHVLSTNGNKAWQEKMQALLASS 415 Query: 121 PFGQACQAYPGRDLWHMRSLLFTEPVDFLIGNTHGKYLERDTGTPLIRIGFPIFDRHHHH 180 PFGQ CQ YPGRDLWHMRSLLFTEPVDFLIGNT+GKYLERDT TPLIRIGFPIFDRHHHH Sbjct: 416 PFGQGCQVYPGRDLWHMRSLLFTEPVDFLIGNTYGKYLERDTATPLIRIGFPIFDRHHHH 475 Query: 181 RSPVWGYQGGLNVLVKILDKIFDEIDKKTNVLGKTDYSFDIIR 223 RSP+WGYQGGLNVLVKILDKIFDEID KTN+LGKTDYSFDIIR Sbjct: 476 RSPIWGYQGGLNVLVKILDKIFDEIDNKTNILGKTDYSFDIIR 518 >gb|AAA26326.1| nitrogen fixation protein [Bradyrhizobium japonicum] Length = 518 Score = 445 bits (1144), Expect = e-123, Method: Compositional matrix adjust. Identities = 206/223 (92%), Positives = 215/223 (96%) Query: 1 MQQWCTEKTLPFVSEHGQDVVSFNYPVGVSATDDFLVALSRISGKEIPEELARERGRLVD 60 MQQWCTEKTL F +EHGQDV+SFNYPVG+SATDDF+VALSRISGKEIPE+LARERGRLVD Sbjct: 296 MQQWCTEKTLSFAAEHGQDVLSFNYPVGLSATDDFIVALSRISGKEIPEQLARERGRLVD 355 Query: 61 AIADSSAHIHGKKFAIYGDPDLCYGLAAFLLELGAEPTHVLSTNGNKAWQEKMQALFASS 120 AIADSSAH+HGKKFAIYGDPDLCYGLAAFLLELGAEPTHVLSTNGNKAWQEKMQAL ASS Sbjct: 356 AIADSSAHVHGKKFAIYGDPDLCYGLAAFLLELGAEPTHVLSTNGNKAWQEKMQALLASS 415 Query: 121 PFGQACQAYPGRDLWHMRSLLFTEPVDFLIGNTHGKYLERDTGTPLIRIGFPIFDRHHHH 180 PFGQ CQ YPGRDLWHMRSLLFTEPVDFLIGNT+GKYLERDT TPLIRIGFPIFDRHHHH Sbjct: 416 PFGQGCQVYPGRDLWHMRSLLFTEPVDFLIGNTYGKYLERDTATPLIRIGFPIFDRHHHH 475 Query: 181 RSPVWGYQGGLNVLVKILDKIFDEIDKKTNVLGKTDYSFDIIR 223 R P+WGYQGGLNVLVKILDKIFDEID KTN+LGKTDYSFDIIR Sbjct: 476 RFPIWGYQGGLNVLVKILDKIFDEIDNKTNILGKTDYSFDIIR 518 >sp|P06122.1|NIFK_BRASP RecName: Full=Nitrogenase molybdenum-iron protein beta chain; AltName: Full=Dinitrogenase; AltName: Full=Nitrogenase component I pir||B23874 nitrogenase (EC 1.18.6.1) molybdenum-iron protein beta chain - Rhizobium sp emb|CAA25597.1| unnamed protein product [Rhizobium sp. ANU289] Length = 513 Score = 424 bits (1089), Expect = e-117, Method: Compositional matrix adjust. Identities = 206/223 (92%), Positives = 209/223 (93%), Gaps = 2/223 (0%) Query: 1 MQQWCTEKTLPFVSEHGQDVVSFNYPVGVSATDDFLVALSRISGKEIPEELARERGRLVD 60 MQQWCTEKTLPFVSEHGQDVVSFNYPVGVSATDD LVALSRISGKEIPE+LARERGRLVD Sbjct: 293 MQQWCTEKTLPFVSEHGQDVVSFNYPVGVSATDDLLVALSRISGKEIPEQLARERGRLVD 352 Query: 61 AIADSSAHIHGKKFAIYGDPDLCYGLAAFLLELGAEPTHVLSTNGNKAWQEKMQALFASS 120 AIADSSAHIHGKKFAIYGDPDLCYGLAAFLLELGAEPTHVLSTNGN E LFA S Sbjct: 353 AIADSSAHIHGKKFAIYGDPDLCYGLAAFLLELGAEPTHVLSTNGNNVAGEN-ATLFAGS 411 Query: 121 PFGQACQAYPGRDLWHMRSLLFTEPVDFLIGNTHGKYLERDTGTPLIRIGFPIFDRHHHH 180 PFG+ AYPGRDLWHMRSLLFTEPVDFLIGNTHGKYLERDTGTPLIRIGFPIFDRHHHH Sbjct: 412 PFGE-LPAYPGRDLWHMRSLLFTEPVDFLIGNTHGKYLERDTGTPLIRIGFPIFDRHHHH 470 Query: 181 RSPVWGYQGGLNVLVKILDKIFDEIDKKTNVLGKTDYSFDIIR 223 R PVWGYQGGLNVLVKILDKIFDEIDKKT+VLGKTDYSFDIIR Sbjct: 471 RFPVWGYQGGLNVLVKILDKIFDEIDKKTSVLGKTDYSFDIIR 513 >ref|YP_004677461.1| nitrogenase molybdenum-iron protein beta chain [Hyphomicrobium sp. MC1] emb|CCB66895.1| Nitrogenase molybdenum-iron protein beta chain [Hyphomicrobium sp. MC1] Length = 519 Score = 409 bits (1052), Expect = e-112, Method: Compositional matrix adjust. Identities = 186/223 (83%), Positives = 207/223 (92%) Query: 1 MQQWCTEKTLPFVSEHGQDVVSFNYPVGVSATDDFLVALSRISGKEIPEELARERGRLVD 60 MQ++ TEKTLPF++ HGQ+VV+ N+PVGVSATD FL+ +SRI+G+EIPEELARERGRLVD Sbjct: 297 MQEYSTEKTLPFIAGHGQEVVALNHPVGVSATDKFLMEVSRITGREIPEELARERGRLVD 356 Query: 61 AIADSSAHIHGKKFAIYGDPDLCYGLAAFLLELGAEPTHVLSTNGNKAWQEKMQALFASS 120 A+ADSSAHIHGKK+AIYGDPDLCYGLAAFLLELGAEPTHVL+TNGNKAW EKMQ LF SS Sbjct: 357 AMADSSAHIHGKKYAIYGDPDLCYGLAAFLLELGAEPTHVLATNGNKAWAEKMQTLFDSS 416 Query: 121 PFGQACQAYPGRDLWHMRSLLFTEPVDFLIGNTHGKYLERDTGTPLIRIGFPIFDRHHHH 180 PFG+ C YPGRDLWHMRSLLFTEPVDFLIGNT+GKYLERDTGTPL+RIGFP+FDRHHHH Sbjct: 417 PFGKNCHVYPGRDLWHMRSLLFTEPVDFLIGNTYGKYLERDTGTPLVRIGFPVFDRHHHH 476 Query: 181 RSPVWGYQGGLNVLVKILDKIFDEIDKKTNVLGKTDYSFDIIR 223 R PVWGYQGG+NVL+ +LDKIFDEIDK TNV KTDYSFDIIR Sbjct: 477 RRPVWGYQGGMNVLITLLDKIFDEIDKNTNVPAKTDYSFDIIR 519 >ref|YP_001523955.1| nitrogenase molybdenum-iron protein beta chain [Azorhizobium caulinodans ORS 571] dbj|BAF87037.1| nitrogenase molybdenum-iron protein beta chain [Azorhizobium caulinodans ORS 571] Length = 519 Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust. Identities = 184/223 (82%), Positives = 206/223 (92%) Query: 1 MQQWCTEKTLPFVSEHGQDVVSFNYPVGVSATDDFLVALSRISGKEIPEELARERGRLVD 60 MQ++CTEKTLPF++ HGQ+ V+FN+P+GV+ TD FL+ ++R++GKEIPEELA+ERGRLVD Sbjct: 297 MQEFCTEKTLPFIANHGQETVAFNHPIGVAGTDKFLMEIARLTGKEIPEELAKERGRLVD 356 Query: 61 AIADSSAHIHGKKFAIYGDPDLCYGLAAFLLELGAEPTHVLSTNGNKAWQEKMQALFASS 120 AIADS+AHIHGKKFAIYGDPDLC GLAAFLLELGAEPTHVL+TNGNK W EKMQALF SS Sbjct: 357 AIADSNAHIHGKKFAIYGDPDLCLGLAAFLLELGAEPTHVLATNGNKDWAEKMQALFDSS 416 Query: 121 PFGQACQAYPGRDLWHMRSLLFTEPVDFLIGNTHGKYLERDTGTPLIRIGFPIFDRHHHH 180 PFG C AYPG+DLWHMRSLLFTEPVDFLIGNT+GKYLERDTGTPLIRIGFPIFDRHHHH Sbjct: 417 PFGANCHAYPGKDLWHMRSLLFTEPVDFLIGNTYGKYLERDTGTPLIRIGFPIFDRHHHH 476 Query: 181 RSPVWGYQGGLNVLVKILDKIFDEIDKKTNVLGKTDYSFDIIR 223 R PVWGYQGG+NVL+ ILDKIFDEID+ TNV KTDYSFDIIR Sbjct: 477 RRPVWGYQGGMNVLITILDKIFDEIDRNTNVPAKTDYSFDIIR 519