BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0045.0006.p (273 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_768384.1| nitrogenase molybdenum-iron protein subunit bet... 538 e-151 gb|AAA26326.1| nitrogen fixation protein [Bradyrhizobium japonicum] 538 e-151 ref|YP_001241770.1| nitrogenase molybdenum-iron protein beta cha... 521 e-146 sp|P06122.1|NIFK_BRASP RecName: Full=Nitrogenase molybdenum-iron... 520 e-145 ref|YP_001207332.1| nitrogenase molybdenum-iron protein beta cha... 518 e-145 >ref|NP_768384.1| nitrogenase molybdenum-iron protein subunit beta [Bradyrhizobium japonicum USDA 110] sp|P20621.3|NIFK_BRAJA RecName: Full=Nitrogenase molybdenum-iron protein beta chain; AltName: Full=Dinitrogenase; AltName: Full=Nitrogenase component I gb|AAG60730.1|AF322012_35 NifK [Bradyrhizobium japonicum] dbj|BAC47009.1| nitrogenase molybdenum-iron protein beta chain [Bradyrhizobium japonicum USDA 110] Length = 518 Score = 538 bits (1387), Expect = e-151, Method: Compositional matrix adjust. Identities = 257/272 (94%), Positives = 262/272 (96%) Query: 1 MAQSAEHVLDHLELFRGPEYQQMLADKKLFENPRDPAEVERIKEWTKTPEYREKNFAREA 60 M QSAEHVLDH+ELFRGPEYQQMLA KK+FENPRDPAEVERIKEWTKT EYREKNFAREA Sbjct: 1 MPQSAEHVLDHVELFRGPEYQQMLAKKKIFENPRDPAEVERIKEWTKTAEYREKNFAREA 60 Query: 61 LAVNPAKACQPLGAVFVSVGFEGTLPFVHGSQGCVAYYRSHLSRHFKEPSSCVSSSMTED 120 LAVNPAKACQPLGAVF SVGFE TLPFVHGSQGCVAYYRSHLSRHFKEPSSCVSSSMTED Sbjct: 61 LAVNPAKACQPLGAVFASVGFERTLPFVHGSQGCVAYYRSHLSRHFKEPSSCVSSSMTED 120 Query: 121 AAVFGGLNNMIDGLANSYNMYKPKMIAVSTTCMAEVIGDDLNAFIKTSKEKGSVPAEFDV 180 AAVFGGLNNM DGLANSY MYKPKMIAVSTTCMAEVIGDDLNAFIKTSKEKGSVPA+FDV Sbjct: 121 AAVFGGLNNMTDGLANSYKMYKPKMIAVSTTCMAEVIGDDLNAFIKTSKEKGSVPADFDV 180 Query: 181 PFAHTPAFVGSHVTGYDNALKGILEHFWDGKAGTAPKLERKPNEAINIIGGFDGNTVGNL 240 PFAHTPAFVGSHVTGYDNALKGILEHFWDGKAGTAPKLERKPN AINIIGGFDG TVGNL Sbjct: 181 PFAHTPAFVGSHVTGYDNALKGILEHFWDGKAGTAPKLERKPNGAINIIGGFDGYTVGNL 240 Query: 241 REIKRILALMGIEHTILADNSEVFDTPTDGEF 272 REIKRIL LMGI+HT+LADNSEVFDTPTDGEF Sbjct: 241 REIKRILELMGIQHTVLADNSEVFDTPTDGEF 272 >gb|AAA26326.1| nitrogen fixation protein [Bradyrhizobium japonicum] Length = 518 Score = 538 bits (1386), Expect = e-151, Method: Compositional matrix adjust. Identities = 257/272 (94%), Positives = 262/272 (96%) Query: 1 MAQSAEHVLDHLELFRGPEYQQMLADKKLFENPRDPAEVERIKEWTKTPEYREKNFAREA 60 M QSAEHVLDH+ELFRGPEYQQMLA KK+FENPRDPAEVERIKEWTKT EYREKNFAREA Sbjct: 1 MPQSAEHVLDHVELFRGPEYQQMLAKKKIFENPRDPAEVERIKEWTKTAEYREKNFAREA 60 Query: 61 LAVNPAKACQPLGAVFVSVGFEGTLPFVHGSQGCVAYYRSHLSRHFKEPSSCVSSSMTED 120 LAVNPAKACQPLGAVF SVGFE TLPFVHGSQGCVAYYRSHLSRHFKEPSSCVSSSMTED Sbjct: 61 LAVNPAKACQPLGAVFASVGFERTLPFVHGSQGCVAYYRSHLSRHFKEPSSCVSSSMTED 120 Query: 121 AAVFGGLNNMIDGLANSYNMYKPKMIAVSTTCMAEVIGDDLNAFIKTSKEKGSVPAEFDV 180 AAVFGGLNNM DGLANSY MYKPKMIAVSTTCMAEVIGDDLNAFIKTSKEKGSVPA+FDV Sbjct: 121 AAVFGGLNNMTDGLANSYKMYKPKMIAVSTTCMAEVIGDDLNAFIKTSKEKGSVPADFDV 180 Query: 181 PFAHTPAFVGSHVTGYDNALKGILEHFWDGKAGTAPKLERKPNEAINIIGGFDGNTVGNL 240 PFAHTPAFVGSHVTGYDNALKGILEHFWDGKAGTAPKLERKPN AINIIGGFDG TVGNL Sbjct: 181 PFAHTPAFVGSHVTGYDNALKGILEHFWDGKAGTAPKLERKPNGAINIIGGFDGYTVGNL 240 Query: 241 REIKRILALMGIEHTILADNSEVFDTPTDGEF 272 REIKRIL LMGI+HT+LADNSEVFDTPTDGEF Sbjct: 241 REIKRILELMGIQHTVLADNSEVFDTPTDGEF 272 >ref|YP_001241770.1| nitrogenase molybdenum-iron protein beta chain, nifK [Bradyrhizobium sp. BTAi1] gb|ABQ37864.1| Mo-nitrogenase MoFe protein subunit NifK [Bradyrhizobium sp. BTAi1] Length = 519 Score = 521 bits (1341), Expect = e-146, Method: Compositional matrix adjust. Identities = 248/273 (90%), Positives = 257/273 (94%), Gaps = 1/273 (0%) Query: 1 MAQSAEHVLDHLELFRGPEYQQMLADKK-LFENPRDPAEVERIKEWTKTPEYREKNFARE 59 M QSAEHVLDH ELFRGPEYQQMLA+KK +FENPRDPAEVERI+EW KTPEYREKNFARE Sbjct: 1 MTQSAEHVLDHFELFRGPEYQQMLANKKKMFENPRDPAEVERIREWAKTPEYREKNFARE 60 Query: 60 ALAVNPAKACQPLGAVFVSVGFEGTLPFVHGSQGCVAYYRSHLSRHFKEPSSCVSSSMTE 119 AL VNPAKACQPLGAVFV+VGFE TLPFVHGSQGCVAYYRSHLSRHFKEPSSCVSSSMTE Sbjct: 61 ALTVNPAKACQPLGAVFVAVGFESTLPFVHGSQGCVAYYRSHLSRHFKEPSSCVSSSMTE 120 Query: 120 DAAVFGGLNNMIDGLANSYNMYKPKMIAVSTTCMAEVIGDDLNAFIKTSKEKGSVPAEFD 179 DAAVFGGLNNMIDGLAN+YNMYKPKMIAVSTTCMAEVIGDDLNAFIKTSKEKGSVPAEFD Sbjct: 121 DAAVFGGLNNMIDGLANAYNMYKPKMIAVSTTCMAEVIGDDLNAFIKTSKEKGSVPAEFD 180 Query: 180 VPFAHTPAFVGSHVTGYDNALKGILEHFWDGKAGTAPKLERKPNEAINIIGGFDGNTVGN 239 VPFAHTPAFVGSHVTGYDNA+KGIL+HFWDGKAGTAPKLER PNE IN IGGFDG TVGN Sbjct: 181 VPFAHTPAFVGSHVTGYDNAMKGILDHFWDGKAGTAPKLERVPNEKINFIGGFDGYTVGN 240 Query: 240 LREIKRILALMGIEHTILADNSEVFDTPTDGEF 272 LRE+K I MGIE+TIL DNS VFDTPTDGEF Sbjct: 241 LREVKHIFEEMGIEYTILGDNSNVFDTPTDGEF 273 >sp|P06122.1|NIFK_BRASP RecName: Full=Nitrogenase molybdenum-iron protein beta chain; AltName: Full=Dinitrogenase; AltName: Full=Nitrogenase component I pir||B23874 nitrogenase (EC 1.18.6.1) molybdenum-iron protein beta chain - Rhizobium sp emb|CAA25597.1| unnamed protein product [Rhizobium sp. ANU289] Length = 513 Score = 520 bits (1339), Expect = e-145, Method: Compositional matrix adjust. Identities = 256/272 (94%), Positives = 261/272 (95%), Gaps = 3/272 (1%) Query: 1 MAQSAEHVLDHLELFRGPEYQQMLADKKLFENPRDPAEVERIKEWTKTPEYREKNFAREA 60 MAQSA+HVLDHLELFRGPEYQQMLADKK+FENPRDPAEVERI+ TKTPEYREKNFA EA Sbjct: 1 MAQSADHVLDHLELFRGPEYQQMLADKKMFENPRDPAEVERIRAVTKTPEYREKNFA-EA 59 Query: 61 LAVNPAKACQPLGAVFVSVGFEGTLPFVHGSQGCVAYYRSHLSRHFKEPSSCVSSSMTED 120 LAVNPAKACQPLGAVFVSVGFEGTLPFVHGSQGCVAYYRSHLSRHFKEPSSCVSSSMTED Sbjct: 60 LAVNPAKACQPLGAVFVSVGFEGTLPFVHGSQGCVAYYRSHLSRHFKEPSSCVSSSMTED 119 Query: 121 AAVFGGLNNMIDGLANSYNMYKPKMIAVSTTCMAEVIGDDLNAFIKTSKEKGSVPAEFDV 180 AAVFGGLNNMIDGLANSYNMYKPKMI STTCMAEVIGDDLNAFIKTSKEKGSV Sbjct: 120 AAVFGGLNNMIDGLANSYNMYKPKMIC-STTCMAEVIGDDLNAFIKTSKEKGSVRRS-ST 177 Query: 181 PFAHTPAFVGSHVTGYDNALKGILEHFWDGKAGTAPKLERKPNEAINIIGGFDGNTVGNL 240 PFAHTPAFVGSHVTGYDNALKGILEHFW+GKAGTAPKLERKPNEAINIIGGFDGNTVGNL Sbjct: 178 PFAHTPAFVGSHVTGYDNALKGILEHFWNGKAGTAPKLERKPNEAINIIGGFDGNTVGNL 237 Query: 241 REIKRILALMGIEHTILADNSEVFDTPTDGEF 272 REIKRILALMGI+HTILADNSEVFDTPTDGEF Sbjct: 238 REIKRILALMGIKHTILADNSEVFDTPTDGEF 269 >ref|YP_001207332.1| nitrogenase molybdenum-iron protein beta chain, nifK [Bradyrhizobium sp. ORS 278] emb|CAL79115.1| nitrogenase molybdenum-iron protein beta chain, nifK [Bradyrhizobium sp. ORS 278] Length = 519 Score = 518 bits (1335), Expect = e-145, Method: Compositional matrix adjust. Identities = 246/273 (90%), Positives = 257/273 (94%), Gaps = 1/273 (0%) Query: 1 MAQSAEHVLDHLELFRGPEYQQMLADKK-LFENPRDPAEVERIKEWTKTPEYREKNFARE 59 M QSAEHVLDH ELFRGPEYQQMLA+KK +FENPRDPAEVERI+EW KTPEYREKNFARE Sbjct: 1 MTQSAEHVLDHFELFRGPEYQQMLANKKKMFENPRDPAEVERIREWAKTPEYREKNFARE 60 Query: 60 ALAVNPAKACQPLGAVFVSVGFEGTLPFVHGSQGCVAYYRSHLSRHFKEPSSCVSSSMTE 119 AL VNPAKACQPLGAVFV+VGFE TLPFVHGSQGCVAYYRSHLSRHFKEPSSCVSSSMTE Sbjct: 61 ALTVNPAKACQPLGAVFVAVGFEKTLPFVHGSQGCVAYYRSHLSRHFKEPSSCVSSSMTE 120 Query: 120 DAAVFGGLNNMIDGLANSYNMYKPKMIAVSTTCMAEVIGDDLNAFIKTSKEKGSVPAEFD 179 DAAVFGGLNNMIDGLAN+YNMYKPKMIAVSTTCMAEVIGDDLNAFIKTSKEKGSVPAE+D Sbjct: 121 DAAVFGGLNNMIDGLANAYNMYKPKMIAVSTTCMAEVIGDDLNAFIKTSKEKGSVPAEYD 180 Query: 180 VPFAHTPAFVGSHVTGYDNALKGILEHFWDGKAGTAPKLERKPNEAINIIGGFDGNTVGN 239 VPFAHTPAFVGSHVTGYDNA+KGIL+HFWDGKAGTAPKLER PNE IN IGGFDG TVGN Sbjct: 181 VPFAHTPAFVGSHVTGYDNAMKGILDHFWDGKAGTAPKLERVPNEKINFIGGFDGYTVGN 240 Query: 240 LREIKRILALMGIEHTILADNSEVFDTPTDGEF 272 +RE+K I MGIE+TIL DNS VFDTPTDGEF Sbjct: 241 IREVKHIFEEMGIEYTILGDNSNVFDTPTDGEF 273