BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0044.0024.p (200 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001239795.1| 50S ribosomal protein L9 [Bradyrhizobium sp.... 329 2e-88 ref|YP_001205331.1| 50S ribosomal protein L9 [Bradyrhizobium sp.... 328 3e-88 ref|ZP_01047320.1| 50S ribosomal protein L9 [Nitrobacter sp. Nb-... 322 2e-86 ref|YP_318307.1| 50S ribosomal protein L9 [Nitrobacter winograds... 320 5e-86 ref|YP_577665.1| 50S ribosomal protein L9 [Nitrobacter hamburgen... 316 1e-84 >ref|YP_001239795.1| 50S ribosomal protein L9 [Bradyrhizobium sp. BTAi1] sp|A5EI95.1|RL9_BRASB RecName: Full=50S ribosomal protein L9 gb|ABQ35889.1| LSU ribosomal protein L9P [Bradyrhizobium sp. BTAi1] Length = 197 Score = 329 bits (843), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 171/192 (89%), Positives = 183/192 (95%) Query: 1 MEVILLERVAKLGQMGEVVRVKDGFARNFLLKRGKALRATEANRAKYDGMKAELEANNIK 60 MEVILLERVAKLGQMGE+V+VKDGFARNFLLKR KALRAT N+AKY+GMKAELEANNIK Sbjct: 1 MEVILLERVAKLGQMGEIVKVKDGFARNFLLKRKKALRATAENKAKYEGMKAELEANNIK 60 Query: 61 AKGEAAKVAEKIDGRDIVIIRQASESGQLFGSVTVRDIVAALATDGVTVSRPQVWLDSPI 120 AKGEAAKVAEKIDGRDIVIIRQASESGQLFGSV+VRDIV ALA DG+TVSRPQVWLD+PI Sbjct: 61 AKGEAAKVAEKIDGRDIVIIRQASESGQLFGSVSVRDIVVALAADGITVSRPQVWLDAPI 120 Query: 121 KVIGAQKVTIAVHPEVETSVTVTVARSAEEAERIKRGEDISTRQEDQDAAAEALAAAGEF 180 K IG QK+TIA+HPEVETSVTVTVARSA+EAERIKRGEDISTRQED+DAAAEA+AAAGEF Sbjct: 121 KAIGQQKITIAIHPEVETSVTVTVARSADEAERIKRGEDISTRQEDRDAAAEAIAAAGEF 180 Query: 181 FDPEAQHDEEAA 192 FDPEAQ DE AA Sbjct: 181 FDPEAQEDEAAA 192 >ref|YP_001205331.1| 50S ribosomal protein L9 [Bradyrhizobium sp. ORS 278] sp|A4YT74.1|RL9_BRASO RecName: Full=50S ribosomal protein L9 emb|CAL77100.1| 50S ribosomal protein L9 [Bradyrhizobium sp. ORS 278] Length = 196 Score = 328 bits (840), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 174/198 (87%), Positives = 187/198 (94%), Gaps = 2/198 (1%) Query: 1 MEVILLERVAKLGQMGEVVRVKDGFARNFLLKRGKALRATEANRAKYDGMKAELEANNIK 60 MEVILLERVAKLGQMGE+V+VKDGFARNFLLKR KALRAT N+AKY+GMKAELEANNIK Sbjct: 1 MEVILLERVAKLGQMGEIVKVKDGFARNFLLKRKKALRATAENKAKYEGMKAELEANNIK 60 Query: 61 AKGEAAKVAEKIDGRDIVIIRQASESGQLFGSVTVRDIVAALATDGVTVSRPQVWLDSPI 120 AKGEAAKVAEKIDGRDIV+IRQASESGQLFGSV+VRDIV ALA DG+TVSRPQVWLD+PI Sbjct: 61 AKGEAAKVAEKIDGRDIVVIRQASESGQLFGSVSVRDIVDALAADGITVSRPQVWLDAPI 120 Query: 121 KVIGAQKVTIAVHPEVETSVTVTVARSAEEAERIKRGEDISTRQEDQDAAAEALAAAGEF 180 K IG QKVTIA+HPEVETSVTVTVARSA+EAERIKRGEDISTRQED+DAAAEA+AAAGEF Sbjct: 121 KTIGQQKVTIAIHPEVETSVTVTVARSADEAERIKRGEDISTRQEDRDAAAEAIAAAGEF 180 Query: 181 FDPEAQHDEEAAPAPAAE 198 FDPEAQ EEAA PAA+ Sbjct: 181 FDPEAQ--EEAAGEPAAQ 196 >ref|ZP_01047320.1| 50S ribosomal protein L9 [Nitrobacter sp. Nb-311A] gb|EAQ34748.1| 50S ribosomal protein L9 [Nitrobacter sp. Nb-311A] Length = 201 Score = 322 bits (826), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 168/201 (83%), Positives = 186/201 (92%), Gaps = 1/201 (0%) Query: 1 MEVILLERVAKLGQMGEVVRVKDGFARNFLLKRGKALRATEANRAKYDGMKAELEANNIK 60 ME+ILLERVAKLGQMGEVV+VKDGFARNFLL+RGKALRAT NRAKYDGMKAELEANNIK Sbjct: 1 MEIILLERVAKLGQMGEVVKVKDGFARNFLLRRGKALRATAENRAKYDGMKAELEANNIK 60 Query: 61 AKGEAAKVAEKIDGRDIVIIRQASESGQLFGSVTVRDIVAALATDGVTVSRPQVWLDSPI 120 AKGEAAKVAEKI+GRDIV++RQASE+GQLFGSVTVRDIVAALA DG+ VSRPQVWLD+PI Sbjct: 61 AKGEAAKVAEKINGRDIVVLRQASETGQLFGSVTVRDIVAALAADGIIVSRPQVWLDAPI 120 Query: 121 KVIGAQKVTIAVHPEVETSVTVTVARSAEEAERIKRGEDISTRQEDQDAAAEALAAAGEF 180 K IG QK+T+AVHPEVE +TVTVARS +EAERI+RGEDISTRQED++AAAEA+AAAGEF Sbjct: 121 KTIGQQKLTVAVHPEVEAEITVTVARSMDEAERIQRGEDISTRQEDRNAAAEAIAAAGEF 180 Query: 181 FDPEAQHDEEAA-PAPAAEEK 200 FDPEAQHDE A +AEEK Sbjct: 181 FDPEAQHDEPATEDEQSAEEK 201 >ref|YP_318307.1| 50S ribosomal protein L9 [Nitrobacter winogradskyi Nb-255] sp|Q3SRY6.1|RL9_NITWN RecName: Full=50S ribosomal protein L9 gb|ABA04955.1| LSU ribosomal protein L9P [Nitrobacter winogradskyi Nb-255] Length = 202 Score = 320 bits (821), Expect = 5e-86, Method: Compositional matrix adjust. Identities = 166/199 (83%), Positives = 185/199 (92%), Gaps = 4/199 (2%) Query: 1 MEVILLERVAKLGQMGEVVRVKDGFARNFLLKRGKALRATEANRAKYDGMKAELEANNIK 60 ME+ILLERVAKLGQMGEVV+VKDGFARNFLL+RGKALRAT NRAKYDGMKAELEANNIK Sbjct: 1 MEIILLERVAKLGQMGEVVKVKDGFARNFLLRRGKALRATAENRAKYDGMKAELEANNIK 60 Query: 61 AKGEAAKVAEKIDGRDIVIIRQASESGQLFGSVTVRDIVAALATDGVTVSRPQVWLDSPI 120 AKGEAA VAEKI+GRDIV+IRQASE+GQLFGSVTVRDIVAALA DG+ VSRPQVWLD+PI Sbjct: 61 AKGEAATVAEKINGRDIVVIRQASETGQLFGSVTVRDIVAALAADGIIVSRPQVWLDAPI 120 Query: 121 KVIGAQKVTIAVHPEVETSVTVTVARSAEEAERIKRGEDISTRQEDQDAAAEALAAAGEF 180 K IG QK+T+AVHPEVE +TVTVARS +EAERI+RGEDISTR+ED+DAAAEA+AAAGEF Sbjct: 121 KTIGQQKLTVAVHPEVEAEITVTVARSVDEAERIQRGEDISTRREDRDAAAEAIAAAGEF 180 Query: 181 FDPEAQHDEEAAPAPAAEE 199 FDP+AQHD+E PAAE+ Sbjct: 181 FDPDAQHDDE----PAAED 195 >ref|YP_577665.1| 50S ribosomal protein L9 [Nitrobacter hamburgensis X14] sp|Q1QKP2.1|RL9_NITHX RecName: Full=50S ribosomal protein L9 gb|ABE63205.1| LSU ribosomal protein L9P [Nitrobacter hamburgensis X14] Length = 202 Score = 316 bits (810), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 170/202 (84%), Positives = 183/202 (90%), Gaps = 2/202 (0%) Query: 1 MEVILLERVAKLGQMGEVVRVKDGFARNFLLKRGKALRATEANRAKYDGMKAELEANNIK 60 MEVILLERVAKLGQMG+VV+VK GFARNFLLKRGKALRAT NR KYDGMKAELE NNIK Sbjct: 1 MEVILLERVAKLGQMGDVVKVKHGFARNFLLKRGKALRATAENRTKYDGMKAELEINNIK 60 Query: 61 AKGEAAKVAEKIDGRDIVIIRQASESGQLFGSVTVRDIVAALATDGVTVSRPQVWLDSPI 120 AKGEAAKVAEKIDGRDIVIIRQASE+GQLFGSVTVRDIVAALA DG+TVSRPQVWLD+PI Sbjct: 61 AKGEAAKVAEKIDGRDIVIIRQASETGQLFGSVTVRDIVAALAEDGITVSRPQVWLDAPI 120 Query: 121 KVIGAQKVTIAVHPEVETSVTVTVARSAEEAERIKRGEDISTRQEDQDAAAEALAAAGEF 180 K IG QK+T+AVHPEVE V VTVARSA+EAERIKRGEDISTR+ED+DAAAEA+AAAGEF Sbjct: 121 KTIGQQKLTVAVHPEVEAHVMVTVARSADEAERIKRGEDISTRREDRDAAAEAIAAAGEF 180 Query: 181 FDPEAQHDE--EAAPAPAAEEK 200 FDPEA+ D+ EA AEEK Sbjct: 181 FDPEAEPDDVAEAGGEQTAEEK 202