BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0044.0001.p (427 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_770588.1| monocarboxylate MFS permease [Bradyrhizobium ja... 702 0.0 ref|YP_001205166.1| MFS family transporter [Bradyrhizobium sp. O... 670 0.0 ref|YP_001239570.1| MFS family transporter [Bradyrhizobium sp. B... 657 0.0 ref|YP_485730.1| major facilitator transporter [Rhodopseudomonas... 618 e-175 ref|YP_570432.1| major facilitator transporter [Rhodopseudomonas... 604 e-170 >ref|NP_770588.1| monocarboxylate MFS permease [Bradyrhizobium japonicum USDA 110] dbj|BAC49213.1| monocarboxylate MFS permease [Bradyrhizobium japonicum USDA 110] Length = 431 Score = 702 bits (1811), Expect = 0.0, Method: Compositional matrix adjust. Identities = 357/419 (85%), Positives = 387/419 (92%), Gaps = 1/419 (0%) Query: 4 KKKKXHYGWVMVAVTFLAALISAGTVGAPGVFIVPLQKEFGWSTAEISSALSIRFVLFGL 63 ++ HYGWVMV VTFLAALISAGTVGAPGVFIVPLQKEFGWSTAEISSALSIRF+LFGL Sbjct: 11 SRRNIHYGWVMVGVTFLAALISAGTVGAPGVFIVPLQKEFGWSTAEISSALSIRFILFGL 70 Query: 64 MAPFAAALMNRYGLRNVTLAAQLIVVSGLLASLAMTQVWQLILLWGVVIGIGTGMTALVL 123 MAPFAAAL+NRYGLRNVTL AQLIVVS L+ASL MT+VWQLI LWGVVIGIGTGMTALVL Sbjct: 71 MAPFAAALLNRYGLRNVTLTAQLIVVSALVASLGMTEVWQLIALWGVVIGIGTGMTALVL 130 Query: 124 GATIAARWFVARRGLVVGILTASVATGQLAFLPLLATLTERYGWRVALGLVCVMLAVAAF 183 GATIA RWF ARRGLVVGI+TASVATGQL FLPLLA+LTER+GWR+ALG VC+ML V+A Sbjct: 131 GATIATRWFAARRGLVVGIMTASVATGQLVFLPLLASLTERFGWRLALGFVCIMLGVSAL 190 Query: 184 AVLMVMRDRPSDVGLRPFGDEGTAPLPAPPPANAPIVAAALGTLRDSAKSSVFWILFATF 243 AVL+ MRDRPSD+GLRPFGDEG+ PLPAPP + I A ALGTLRD++KSS FWILFATF Sbjct: 191 AVLLAMRDRPSDLGLRPFGDEGSEPLPAPPVNHGSITAVALGTLRDASKSSAFWILFATF 250 Query: 244 FVCGASTNGLVQVHLIPMCLDYGIPQVQAASLLAAMGIFDFFGTIVSGWLSDRYDNRYLL 303 FVCGASTNGLVQVHLIPMCLD+GIPQVQAASLLAAMGIFDFFGTI SGWLSDRYDNR+LL Sbjct: 251 FVCGASTNGLVQVHLIPMCLDFGIPQVQAASLLAAMGIFDFFGTIFSGWLSDRYDNRWLL 310 Query: 304 FWYYGLRGLSLLFLPFSDFTFYGLSLFAMFYGLDWIATVPPTVRLTAQRFGAERANLVFG 363 FWYYGLRGLSL+FLPFSDF+FYGLS+FAMFYGLDWIATVPPTVRLTAQ+FG ERANLVFG Sbjct: 311 FWYYGLRGLSLIFLPFSDFSFYGLSIFAMFYGLDWIATVPPTVRLTAQKFGPERANLVFG 370 Query: 364 WIFAGHQLGAGAAAFGAGLSRTIYQSYLPAFFIAGALCIFAALTALAIARPQPKSVAEP 422 WIFAGHQLGAG AAFGAGLSRT+ QSYLPAFFIAGALC+FA+L LA++R QPK A+P Sbjct: 371 WIFAGHQLGAGTAAFGAGLSRTLLQSYLPAFFIAGALCVFASLIVLALSR-QPKPKAQP 428 >ref|YP_001205166.1| MFS family transporter [Bradyrhizobium sp. ORS 278] emb|CAL76931.1| putative transmembrane transport protein of the MFS family, putative monocarboxylate permease [Bradyrhizobium sp. ORS 278] Length = 427 Score = 670 bits (1728), Expect = 0.0, Method: Compositional matrix adjust. Identities = 341/394 (86%), Positives = 366/394 (92%) Query: 5 KKKXHYGWVMVAVTFLAALISAGTVGAPGVFIVPLQKEFGWSTAEISSALSIRFVLFGLM 64 ++ HYGWVMVAVTF AAL+SAGTVGAPGVFIVPLQ+EFGWSTAEISSALSIRFVLFGLM Sbjct: 12 RRNIHYGWVMVAVTFFAALVSAGTVGAPGVFIVPLQQEFGWSTAEISSALSIRFVLFGLM 71 Query: 65 APFAAALMNRYGLRNVTLAAQLIVVSGLLASLAMTQVWQLILLWGVVIGIGTGMTALVLG 124 APFAAAL+NRYGLRN+TL AQLIVVS LLASLAMTQVW L+LLWGVVIGIGTGMTALVLG Sbjct: 72 APFAAALLNRYGLRNITLLAQLIVVSALLASLAMTQVWHLVLLWGVVIGIGTGMTALVLG 131 Query: 125 ATIAARWFVARRGLVVGILTASVATGQLAFLPLLATLTERYGWRVALGLVCVMLAVAAFA 184 ATIA RWFVARRGLVVGILTASVATGQL FLPLLA+LTER GWR AL LVCV L V+A A Sbjct: 132 ATIATRWFVARRGLVVGILTASVATGQLVFLPLLASLTERLGWRTALALVCVTLGVSATA 191 Query: 185 VLMVMRDRPSDVGLRPFGDEGTAPLPAPPPANAPIVAAALGTLRDSAKSSVFWILFATFF 244 VL++MRDRPSD+GLRPFGD GT P+ APPP PI+AAALGTLRD+ + VFW+LFATFF Sbjct: 192 VLLLMRDRPSDLGLRPFGDTGTEPIAAPPPVTTPILAAALGTLRDAVRVPVFWMLFATFF 251 Query: 245 VCGASTNGLVQVHLIPMCLDYGIPQVQAASLLAAMGIFDFFGTIVSGWLSDRYDNRYLLF 304 +CGASTNGLVQVHLIPMCLD+GIPQVQAASLLAAMG+FDF GTIVSGWLSDRYDNR+LLF Sbjct: 252 ICGASTNGLVQVHLIPMCLDFGIPQVQAASLLAAMGMFDFVGTIVSGWLSDRYDNRWLLF 311 Query: 305 WYYGLRGLSLLFLPFSDFTFYGLSLFAMFYGLDWIATVPPTVRLTAQRFGAERANLVFGW 364 WYYGLRGLSLLFLPF+DF+FYGLSLFAMFYGLDWIATVPPTVRLTAQRFG ERANLVFGW Sbjct: 312 WYYGLRGLSLLFLPFTDFSFYGLSLFAMFYGLDWIATVPPTVRLTAQRFGPERANLVFGW 371 Query: 365 IFAGHQLGAGAAAFGAGLSRTIYQSYLPAFFIAG 398 +FAGHQLGAG AAFGAGLSRT+ QSYLPAFF AG Sbjct: 372 VFAGHQLGAGTAAFGAGLSRTLLQSYLPAFFTAG 405 >ref|YP_001239570.1| MFS family transporter [Bradyrhizobium sp. BTAi1] gb|ABQ35664.1| putative transmembrane transport protein of the MFS family, putative monocarboxylate permease [Bradyrhizobium sp. BTAi1] Length = 425 Score = 657 bits (1695), Expect = 0.0, Method: Compositional matrix adjust. Identities = 331/391 (84%), Positives = 362/391 (92%) Query: 5 KKKXHYGWVMVAVTFLAALISAGTVGAPGVFIVPLQKEFGWSTAEISSALSIRFVLFGLM 64 ++ HYGWVMVAVTF AL++AGTVGAPGVFIVPLQ+EFGWSTAEISSALSIRFVLFGLM Sbjct: 12 RRNIHYGWVMVAVTFFTALVTAGTVGAPGVFIVPLQQEFGWSTAEISSALSIRFVLFGLM 71 Query: 65 APFAAALMNRYGLRNVTLAAQLIVVSGLLASLAMTQVWQLILLWGVVIGIGTGMTALVLG 124 APFAAAL+NRYGLRN+TL AQ+IVVS LLASLAMTQ+W L+LLWG VIGIGTGMTALVLG Sbjct: 72 APFAAALLNRYGLRNITLLAQVIVVSALLASLAMTQIWHLVLLWGFVIGIGTGMTALVLG 131 Query: 125 ATIAARWFVARRGLVVGILTASVATGQLAFLPLLATLTERYGWRVALGLVCVMLAVAAFA 184 ATIA RWFVARRGLVVG+LTAS ATGQL FLPLLA+LTER GWR AL LVC LAV+A A Sbjct: 132 ATIATRWFVARRGLVVGVLTASTATGQLVFLPLLASLTERLGWRTALALVCCALAVSATA 191 Query: 185 VLMVMRDRPSDVGLRPFGDEGTAPLPAPPPANAPIVAAALGTLRDSAKSSVFWILFATFF 244 VL++MRDRPSD+GLRPFGD+G+ P+ AP P PI+AAALGTLRD+A+ VFW+LFATFF Sbjct: 192 VLLLMRDRPSDLGLRPFGDKGSEPITAPAPVTTPILAAALGTLRDAARVPVFWMLFATFF 251 Query: 245 VCGASTNGLVQVHLIPMCLDYGIPQVQAASLLAAMGIFDFFGTIVSGWLSDRYDNRYLLF 304 +CGASTNGL+QVHLIPMCLD+GIPQVQAASLLAAMGIFDFFGTIVSGWLSDRYDNR+LLF Sbjct: 252 ICGASTNGLIQVHLIPMCLDFGIPQVQAASLLAAMGIFDFFGTIVSGWLSDRYDNRWLLF 311 Query: 305 WYYGLRGLSLLFLPFSDFTFYGLSLFAMFYGLDWIATVPPTVRLTAQRFGAERANLVFGW 364 WYYGLRGLSLLFLPF+DF+FYGLSLFAMFYGLDWIATVPPTVRLTAQRFG ERANLVFGW Sbjct: 312 WYYGLRGLSLLFLPFTDFSFYGLSLFAMFYGLDWIATVPPTVRLTAQRFGTERANLVFGW 371 Query: 365 IFAGHQLGAGAAAFGAGLSRTIYQSYLPAFF 395 +FA HQLGAG AAFGAGLSRT+ QSYLPAFF Sbjct: 372 VFAAHQLGAGTAAFGAGLSRTLLQSYLPAFF 402 >ref|YP_485730.1| major facilitator transporter [Rhodopseudomonas palustris HaA2] gb|ABD06819.1| Major facilitator superfamily MFS_1 [Rhodopseudomonas palustris HaA2] Length = 427 Score = 618 bits (1593), Expect = e-175, Method: Compositional matrix adjust. Identities = 334/423 (78%), Positives = 375/423 (88%), Gaps = 7/423 (1%) Query: 5 KKKXHYGWVMVAVTFLAALISAGTVGAPGVFIVPLQKEFGWSTAEISSALSIRFVLFGLM 64 ++ HYGWVMV VTFL AL+SAG VGAPGVFI+PLQ+EFGW+TAEISSALSIRF+LFGLM Sbjct: 12 RRDIHYGWVMVGVTFLTALVSAGAVGAPGVFILPLQQEFGWTTAEISSALSIRFILFGLM 71 Query: 65 APFAAALMNRYGLRNVTLAAQLIVVSGLLASLAMTQVWQLILLWGVVIGIGTGMTALVLG 124 APFAAALMNRYGLRNV LA Q+I+ + L+ S+AM+QVWQL+LLWGV +GIGTG+TALVLG Sbjct: 72 APFAAALMNRYGLRNVALAGQVIIAASLIGSVAMSQVWQLVLLWGVAVGIGTGLTALVLG 131 Query: 125 ATIAARWFVARRGLVVGILTASVATGQLAFLPLLATLTERYGWRVALGLVCVMLAVAAFA 184 AT+AARWF RRGLVVGILTASVATGQL FLP+LA+LTERYGWRVAL L+C L VAA Sbjct: 132 ATVAARWFNHRRGLVVGILTASVATGQLVFLPMLASLTERYGWRVALLLLCGGLGVAAMG 191 Query: 185 VLMVMRDRPSDVGLRPFGDEGTAPLPAPPPANAPIVAAALGTLRDSAKSSVFWILFATFF 244 VL++MRDRP D+GLRPFGD G+ PLP PPPANAPI+AAALG LRD+AK+ VFWILFATFF Sbjct: 192 VLLMMRDRPGDLGLRPFGDTGSEPLPPPPPANAPIMAAALGALRDAAKTRVFWILFATFF 251 Query: 245 VCGASTNGLVQVHLIPMCLDYGIPQVQAASLLAAMGIFDFFGTIVSGWLSDRYDNRYLLF 304 +CGASTNGL+QVHLIP+C D+GIPQVQAA LLAAMGIFDF GTI+SGWLSDRYDNR+LLF Sbjct: 252 ICGASTNGLIQVHLIPLCADFGIPQVQAAGLLAAMGIFDFVGTILSGWLSDRYDNRWLLF 311 Query: 305 WYYGLRGLSLLFLPFSDFTFYGLSLFAMFYGLDWIATVPPTVRLTAQRFGAERANLVFGW 364 WYYGLRGLSLLFLPFSDFTFYGLSLFA+FYGLDWIATVPPTVRLTAQ+FG ERA +VFGW Sbjct: 312 WYYGLRGLSLLFLPFSDFTFYGLSLFALFYGLDWIATVPPTVRLTAQKFGPERAGIVFGW 371 Query: 365 IFAGHQLGAGAAAFGAGLSRTIYQSYLPAFFIAGALCIFAALTALAIARPQPKSVAEPKP 424 IFAGHQLGA AAFGAGLSRT+ SYLPAFF+AGALCI AAL L I++ P+P Sbjct: 372 IFAGHQLGAATAAFGAGLSRTVLLSYLPAFFVAGALCIVAALIVLTISK-------HPRP 424 Query: 425 VAA 427 AA Sbjct: 425 AAA 427 >ref|YP_570432.1| major facilitator transporter [Rhodopseudomonas palustris BisB5] gb|ABE40531.1| major facilitator superfamily MFS_1 [Rhodopseudomonas palustris BisB5] Length = 427 Score = 604 bits (1557), Expect = e-170, Method: Compositional matrix adjust. Identities = 329/423 (77%), Positives = 369/423 (87%), Gaps = 7/423 (1%) Query: 5 KKKXHYGWVMVAVTFLAALISAGTVGAPGVFIVPLQKEFGWSTAEISSALSIRFVLFGLM 64 ++ HYGWVMV VTFL L+SAG VGAPGVFI+PLQ+EFGW+TAEISSALS+RFVLFGLM Sbjct: 12 RRDIHYGWVMVGVTFLTTLVSAGAVGAPGVFILPLQQEFGWTTAEISSALSVRFVLFGLM 71 Query: 65 APFAAALMNRYGLRNVTLAAQLIVVSGLLASLAMTQVWQLILLWGVVIGIGTGMTALVLG 124 APFAAALMNRYGLRN+ LA Q+IV L+ S+AMTQVWQL++LWG+ +GIGTG+TA+VLG Sbjct: 72 APFAAALMNRYGLRNIVLAGQVIVALSLVGSVAMTQVWQLMVLWGLAVGIGTGLTAMVLG 131 Query: 125 ATIAARWFVARRGLVVGILTASVATGQLAFLPLLATLTERYGWRVALGLVCVMLAVAAFA 184 AT+A RWF RRGLVVGILTAS+ATGQL FLPLLA+LTER GWR AL L+C L VAA Sbjct: 132 ATVATRWFNDRRGLVVGILTASIATGQLVFLPLLASLTERLGWRAALLLLCAGLGVAAMG 191 Query: 185 VLMVMRDRPSDVGLRPFGDEGTAPLPAPPPANAPIVAAALGTLRDSAKSSVFWILFATFF 244 VL++MRDRPSD+GLRPFGD GT PLP PPPANAPIVAAALG LRD+AK+ VFWILF TFF Sbjct: 192 VLLMMRDRPSDLGLRPFGDTGTEPLPPPPPANAPIVAAALGALRDAAKTRVFWILFGTFF 251 Query: 245 VCGASTNGLVQVHLIPMCLDYGIPQVQAASLLAAMGIFDFFGTIVSGWLSDRYDNRYLLF 304 +CGASTNGL+QVHLIP+C D+GIPQVQAA LLAAMGIFDF GTI+SGWLSDRYDNR+LLF Sbjct: 252 ICGASTNGLIQVHLIPLCADFGIPQVQAAGLLAAMGIFDFVGTILSGWLSDRYDNRWLLF 311 Query: 305 WYYGLRGLSLLFLPFSDFTFYGLSLFAMFYGLDWIATVPPTVRLTAQRFGAERANLVFGW 364 WYYGLRGLSLLFLPFSDFT YGLSLFA+FYGLDWIATVPPTVRLTAQ+FG ERA LVFGW Sbjct: 312 WYYGLRGLSLLFLPFSDFTLYGLSLFALFYGLDWIATVPPTVRLTAQKFGPERAGLVFGW 371 Query: 365 IFAGHQLGAGAAAFGAGLSRTIYQSYLPAFFIAGALCIFAALTALAIARPQPKSVAEPKP 424 IFAGHQLGA AA+FGAGLSRT+ SYLPAFF+AGALCI AA L I++ P+P Sbjct: 372 IFAGHQLGAAAASFGAGLSRTVLLSYLPAFFVAGALCIIAAAVVLMISK-------HPRP 424 Query: 425 VAA 427 AA Sbjct: 425 TAA 427