BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0043.0060.p (267 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAC52446.1| bll7181 [Bradyrhizobium japonicum USDA 110] 423 e-116 ref|NP_773821.2| NAD-dependent deacetylase [Bradyrhizobium japon... 423 e-116 gb|AEL09059.1| NAD-dependent deacetylase [Xanthomonas campestris... 390 e-107 ref|NP_635701.1| NAD-dependent deacetylase [Xanthomonas campestr... 388 e-106 ref|ZP_06733038.1| NAD-dependent deacetylase [Xanthomonas fuscan... 387 e-106 >dbj|BAC52446.1| bll7181 [Bradyrhizobium japonicum USDA 110] Length = 319 Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust. Identities = 200/268 (74%), Positives = 230/268 (85%), Gaps = 1/268 (0%) Query: 1 MQHPALRDFIDQHQRLFVLTGAGCSTNSGIPDYRDSDGNWKRTRPVTIQAFLGEAATRQR 60 + + +L+DF+ +HQRLFVLTGAGCSTNSGIPDYRDS GNWKRT+PV QAF+ E TR+R Sbjct: 52 LANQSLQDFVARHQRLFVLTGAGCSTNSGIPDYRDSHGNWKRTQPVNFQAFMSEEHTRRR 111 Query: 61 YWARSMVGWRRFGRAAPNGAHRALAKLEQQGRCELLLTQNVDRLHQAAGSQRVIDLHGRL 120 YWARS++GWRRFG+A PN AH ALA+LE GRC +LLTQNVDRLHQ+AG ++VIDLHGRL Sbjct: 112 YWARSLIGWRRFGQARPNDAHHALARLEANGRCGMLLTQNVDRLHQSAGHRQVIDLHGRL 171 Query: 121 DVVRCLGCGATMPRERFQDELARLNPAWLTLDAADAPDGDADLEQ-DFSSFVVPACEACD 179 D+VRC+GCGA PR FQD L R N WL LDA+DAPDGDADLE DFSSF VPACEAC Sbjct: 172 DLVRCMGCGAKTPRSEFQDTLGRANAEWLALDASDAPDGDADLEHADFSSFKVPACEACG 231 Query: 180 GVLKPDVVFFGENVPRDTVASAQAHLEQADAVLVVGSSLMVYSGFRFVRMAEQRGLPIAA 239 G+LKPDVVFFGENVPRD VA+AQ HL QADA+L+VGSSLMVYSGFRFV+ A QR +PIAA Sbjct: 232 GILKPDVVFFGENVPRDVVATAQDHLSQADAMLIVGSSLMVYSGFRFVQAAAQRQIPIAA 291 Query: 240 VNLGRTRADELLTLKIEDSCETALSFLL 267 VNLGRTRAD+LLTLK+E+ CE AL+FLL Sbjct: 292 VNLGRTRADDLLTLKVEERCEAALAFLL 319 >ref|NP_773821.2| NAD-dependent deacetylase [Bradyrhizobium japonicum USDA 110] sp|Q89EA6.2|NPD2_BRAJA RecName: Full=NAD-dependent deacetylase 2; AltName: Full=Regulatory protein SIR2 homolog 2 Length = 273 Score = 423 bits (1087), Expect = e-116, Method: Compositional matrix adjust. Identities = 200/268 (74%), Positives = 230/268 (85%), Gaps = 1/268 (0%) Query: 1 MQHPALRDFIDQHQRLFVLTGAGCSTNSGIPDYRDSDGNWKRTRPVTIQAFLGEAATRQR 60 + + +L+DF+ +HQRLFVLTGAGCSTNSGIPDYRDS GNWKRT+PV QAF+ E TR+R Sbjct: 6 LANQSLQDFVARHQRLFVLTGAGCSTNSGIPDYRDSHGNWKRTQPVNFQAFMSEEHTRRR 65 Query: 61 YWARSMVGWRRFGRAAPNGAHRALAKLEQQGRCELLLTQNVDRLHQAAGSQRVIDLHGRL 120 YWARS++GWRRFG+A PN AH ALA+LE GRC +LLTQNVDRLHQ+AG ++VIDLHGRL Sbjct: 66 YWARSLIGWRRFGQARPNDAHHALARLEANGRCGMLLTQNVDRLHQSAGHRQVIDLHGRL 125 Query: 121 DVVRCLGCGATMPRERFQDELARLNPAWLTLDAADAPDGDADLEQ-DFSSFVVPACEACD 179 D+VRC+GCGA PR FQD L R N WL LDA+DAPDGDADLE DFSSF VPACEAC Sbjct: 126 DLVRCMGCGAKTPRSEFQDTLGRANAEWLALDASDAPDGDADLEHADFSSFKVPACEACG 185 Query: 180 GVLKPDVVFFGENVPRDTVASAQAHLEQADAVLVVGSSLMVYSGFRFVRMAEQRGLPIAA 239 G+LKPDVVFFGENVPRD VA+AQ HL QADA+L+VGSSLMVYSGFRFV+ A QR +PIAA Sbjct: 186 GILKPDVVFFGENVPRDVVATAQDHLSQADAMLIVGSSLMVYSGFRFVQAAAQRQIPIAA 245 Query: 240 VNLGRTRADELLTLKIEDSCETALSFLL 267 VNLGRTRAD+LLTLK+E+ CE AL+FLL Sbjct: 246 VNLGRTRADDLLTLKVEERCEAALAFLL 273 >gb|AEL09059.1| NAD-dependent deacetylase [Xanthomonas campestris pv. raphani 756C] Length = 293 Score = 390 bits (1003), Expect = e-107, Method: Compositional matrix adjust. Identities = 193/264 (73%), Positives = 217/264 (82%), Gaps = 1/264 (0%) Query: 4 PALRDFIDQHQRLFVLTGAGCSTNSGIPDYRDSDGNWKRTRPVTIQAFLGEAATRQRYWA 63 PAL++FI++HQRLFVL+GAGCST+SGIPDYRD G WKR +PVT QAF+GE +TRQRYWA Sbjct: 10 PALQEFIERHQRLFVLSGAGCSTDSGIPDYRDLQGGWKRPQPVTFQAFMGELSTRQRYWA 69 Query: 64 RSMVGWRRFGRAAPNGAHRALAKLEQQGRCELLLTQNVDRLHQAAGSQRVIDLHGRLDVV 123 RS+VGW RFG A PN H ALA LE +G+ ELLLTQNVDRLHQAAGSQ VIDLHGRLDVV Sbjct: 70 RSLVGWPRFGLARPNATHHALAALEARGQLELLLTQNVDRLHQAAGSQAVIDLHGRLDVV 129 Query: 124 RCLGCGATMPRERFQDELARLNPAWLTLDAADAPDGDADLEQ-DFSSFVVPACEACDGVL 182 RC+GC MPR FQ L R NP W L+AA APDGDADL+ F SFVVPAC AC GVL Sbjct: 130 RCMGCEQRMPRTEFQLLLERDNPGWADLEAAQAPDGDADLDNVAFDSFVVPACPACGGVL 189 Query: 183 KPDVVFFGENVPRDTVASAQAHLEQADAVLVVGSSLMVYSGFRFVRMAEQRGLPIAAVNL 242 KPDVVFFGENVPR+ V A AHL+ ADAVLVVGSSLMVYSGFRFV+ A + GLPIAA+N Sbjct: 190 KPDVVFFGENVPRERVERAFAHLQAADAVLVVGSSLMVYSGFRFVQAAARAGLPIAALNF 249 Query: 243 GRTRADELLTLKIEDSCETALSFL 266 GRTRAD+LL+LK+E SC AL+FL Sbjct: 250 GRTRADDLLSLKVEQSCAQALAFL 273 >ref|NP_635701.1| NAD-dependent deacetylase [Xanthomonas campestris pv. campestris str. ATCC 33913] ref|YP_241423.1| NAD-dependent deacetylase [Xanthomonas campestris pv. campestris str. 8004] sp|Q8PDM9.1|NPD_XANCP RecName: Full=NAD-dependent deacetylase; AltName: Full=Regulatory protein SIR2 homolog sp|Q4UZX0.1|NPD_XANC8 RecName: Full=NAD-dependent deacetylase; AltName: Full=Regulatory protein SIR2 homolog gb|AAM39625.1| SIR2-like regulatory protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gb|AAY47403.1| SIR2-like regulatory protein [Xanthomonas campestris pv. campestris str. 8004] Length = 293 Score = 388 bits (997), Expect = e-106, Method: Compositional matrix adjust. Identities = 191/264 (72%), Positives = 217/264 (82%), Gaps = 1/264 (0%) Query: 4 PALRDFIDQHQRLFVLTGAGCSTNSGIPDYRDSDGNWKRTRPVTIQAFLGEAATRQRYWA 63 PAL++F+++HQRLFVL+GAGCST+SGIPDYRD G WKR +PVT QAF+GE +TRQRYWA Sbjct: 10 PALQEFVERHQRLFVLSGAGCSTDSGIPDYRDLQGGWKRPQPVTFQAFMGELSTRQRYWA 69 Query: 64 RSMVGWRRFGRAAPNGAHRALAKLEQQGRCELLLTQNVDRLHQAAGSQRVIDLHGRLDVV 123 RS+VGW RFG A PN H ALA LE +G+ ELLLTQNVDRLHQAAGSQ VIDLHGRLDVV Sbjct: 70 RSLVGWPRFGLARPNATHHALAALEARGQLELLLTQNVDRLHQAAGSQAVIDLHGRLDVV 129 Query: 124 RCLGCGATMPRERFQDELARLNPAWLTLDAADAPDGDADLEQ-DFSSFVVPACEACDGVL 182 RC+GC MPR FQ L R NP W L+AA APDGDADL+ F +FVVPAC AC GVL Sbjct: 130 RCMGCEQRMPRTEFQLLLERDNPGWADLEAAQAPDGDADLDNVAFDNFVVPACPACGGVL 189 Query: 183 KPDVVFFGENVPRDTVASAQAHLEQADAVLVVGSSLMVYSGFRFVRMAEQRGLPIAAVNL 242 KPDVVFFGENVPR+ V A AHL+ ADAVLVVGSSLMVYSGFRFV+ A + GLPIAA+N Sbjct: 190 KPDVVFFGENVPRERVERAFAHLQAADAVLVVGSSLMVYSGFRFVQAAARAGLPIAALNF 249 Query: 243 GRTRADELLTLKIEDSCETALSFL 266 GRTRAD+LL+LK+E SC AL+FL Sbjct: 250 GRTRADDLLSLKVEQSCAQALAFL 273 >ref|ZP_06733038.1| NAD-dependent deacetylase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gb|EFF45895.1| NAD-dependent deacetylase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 293 Score = 387 bits (995), Expect = e-106, Method: Compositional matrix adjust. Identities = 191/263 (72%), Positives = 213/263 (80%), Gaps = 1/263 (0%) Query: 5 ALRDFIDQHQRLFVLTGAGCSTNSGIPDYRDSDGNWKRTRPVTIQAFLGEAATRQRYWAR 64 AL+DFI++HQRLFVLTGAGCST+SGIPDYRD G WKR +PVT QAF+GE +TRQRYWAR Sbjct: 11 ALQDFIERHQRLFVLTGAGCSTDSGIPDYRDLQGGWKRPQPVTFQAFMGELSTRQRYWAR 70 Query: 65 SMVGWRRFGRAAPNGAHRALAKLEQQGRCELLLTQNVDRLHQAAGSQRVIDLHGRLDVVR 124 S+VGW RFG A PN H ALA LE +G+ E+LLTQNVDRLHQAAGSQ VIDLHGRLDVVR Sbjct: 71 SLVGWPRFGLAQPNATHHALAALEARGQLEVLLTQNVDRLHQAAGSQAVIDLHGRLDVVR 130 Query: 125 CLGCGATMPRERFQDELARLNPAWLTLDAADAPDGDADLEQ-DFSSFVVPACEACDGVLK 183 C+GC MPR FQ L + NP W L+A APDGDADL+ F FVVP C C GVLK Sbjct: 131 CMGCERRMPRTEFQLLLEQANPGWAALEAVQAPDGDADLDDVAFEHFVVPPCPVCGGVLK 190 Query: 184 PDVVFFGENVPRDTVASAQAHLEQADAVLVVGSSLMVYSGFRFVRMAEQRGLPIAAVNLG 243 PDVVFFGENVPR+ V A AHL+QADAVLVVGSSLMVYSGFRFV+ A + GLPIAA+N G Sbjct: 191 PDVVFFGENVPRERVERAFAHLQQADAVLVVGSSLMVYSGFRFVQTAARNGLPIAALNFG 250 Query: 244 RTRADELLTLKIEDSCETALSFL 266 RTRADELLTLK+E SC AL+FL Sbjct: 251 RTRADELLTLKVEQSCAQALAFL 273