BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0043.0051.p (419 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_767489.1| serine protease [Bradyrhizobium japonicum USDA ... 438 e-121 ref|YP_001523819.1| serine protease [Azorhizobium caulinodans OR... 177 3e-42 ref|YP_421603.1| TPR repeat-containing protein [Magnetospirillum... 176 9e-42 ref|YP_001242278.1| hypothetical protein BBta_6462 [Bradyrhizobi... 171 2e-40 ref|YP_001834656.1| TPR repeat-containing protein [Beijerinckia ... 170 5e-40 >ref|NP_767489.1| serine protease [Bradyrhizobium japonicum USDA 110] dbj|BAC46114.1| bll0849 [Bradyrhizobium japonicum USDA 110] Length = 416 Score = 438 bits (1127), Expect = e-121, Method: Compositional matrix adjust. Identities = 228/414 (55%), Positives = 289/414 (69%), Gaps = 9/414 (2%) Query: 8 VVAAAWLFASATPSNARGPYGSISVGNWKGGAFTNDKNGAFTHCSAGTTYQSGIFFMVSI 67 VVA A ++A GP+G+I VGNW GGA++ND GAF+HC+A T Y +G+ +V Sbjct: 8 VVACVLQMVLAGVAHAAGPFGTIRVGNWNGGAYSNDSTGAFSHCAASTPYANGVTLLVGQ 67 Query: 68 AENGSWRLGFAHESWRLTAGEAFPLALTFDGQPAFNVYGMPLGTQLVNVEMPVNSALINQ 127 N SW LGFA+ ++R GE + +TFDGQ ++ +V+ +P N A Sbjct: 68 DANSSWLLGFANPAFRFKKGENLTIDVTFDGQAEVRLFATAFSEVMVSAVLPTNVA--RA 125 Query: 128 FRKARQMTAFAQGQLFQFNLNQTAQLLPALLNCVVSVKKNGVANAGEFA-VATKPAAAPP 186 +KA M A A+G FQF+L TA L+ A+ NCV VK +G+ AG+F +A KP AP Sbjct: 126 LQKASLMVAVARGTPFQFSLTSTAPLVAAITNCVTRVKADGLDKAGDFTKIAAKPQTAPD 185 Query: 187 QQAAPGPTQKPARSGTGTGFVVSSSGHVVTNHHVVGGC-SEITGNLSGEAPVKLRLVSDD 245 +QA+P K AR+ +GTGFVVS++GHVVTN+HV+ GC +I GNL+GEA + LR+VS D Sbjct: 186 KQASPATGGKSARTKSGTGFVVSANGHVVTNNHVIDGCVGDIKGNLTGEASMALRVVSSD 245 Query: 246 ETNDLALLQAPT--PFKDVVSLRQNPILVGNGVVAIGYPYHGLLTSDFTVTTGIVSSLSG 303 NDLALLQAP+ FKD +R I G+ V+AIG+PYHG+LTSDFTVTTGIVSSLSG Sbjct: 246 ANNDLALLQAPSTAAFKDFARIRDRSIRSGDSVIAIGFPYHGMLTSDFTVTTGIVSSLSG 305 Query: 304 ILNDTRHLQISAAVQPGNSGGPLFDLTGAVVGVVAAKLDAVRMARATGTIPENINFAIKT 363 + NDTR LQISA VQPGNSGGPLFD TG +VGVV K+DA+R+A ATG IPENINFAIKT Sbjct: 306 MRNDTRFLQISAPVQPGNSGGPLFDATGQIVGVVTGKVDALRIAVATGNIPENINFAIKT 365 Query: 364 GALRDFLDNSAVAYRTAEWREEMKKETAEIARNARGYTLLITCTVNEQSANAKK 417 G LRDFLDNS V Y+TAE + E+K T +IA NAR YT+LI+C EQ A+AK+ Sbjct: 366 GVLRDFLDNSVVPYQTAEPKAELK--TTDIAGNARPYTMLISCNATEQ-ADAKR 416 >ref|YP_001523819.1| serine protease [Azorhizobium caulinodans ORS 571] dbj|BAF86901.1| serine protease [Azorhizobium caulinodans ORS 571] Length = 410 Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 128/368 (34%), Positives = 198/368 (53%), Gaps = 29/368 (7%) Query: 51 CSAGTTYQSGIFFMVSIAENGSWRLGFA--HESWR-LTAGEAFPLALTFDGQPAFN--VY 105 C A TY+ + GS + FA + WR L G + L L G+ + Sbjct: 59 CMATATYEDRTTVWMGFG-GGSNKAFFALSNPKWRSLAVGNRYELQLLARGEGRWRGRFT 117 Query: 106 GMPLGTQL-VNVEMPVNSALINQFRKARQMTAFAQGQLFQFNLNQTAQLLPALLNCVVSV 164 G+ L ++ + + V +I+ R + + + Q +L+ + + AL++C SV Sbjct: 118 GVELDKEMGLLAQDLVTGFVIDIARAGALDVVYDRKIIAQLSLSGSMAAIDALVDCQKSV 177 Query: 165 KKNGVANAGEFAVATKPAA---APPQQAAPGPTQKPARSGTGTGFVVSSSGHVVTNHHVV 221 ++ T+P A A + GP + +S +GTGF VS GH++TN+HVV Sbjct: 178 IA---------SLRTEPKAGDGARTKARGEGPQSEGGKS-SGTGFFVSERGHLLTNNHVV 227 Query: 222 GGCSEITGNLSGEAPVKLRLVSDDETNDLALLQAPTPFKDVVSLRQNPILVGNGVVAIGY 281 GC ++T GE V ++V+ D NDLALL+A KDV +L + VG+GV G+ Sbjct: 228 NGCKKVTVTPVGEVAVPAQVVARDPNNDLALLKADLTPKDVPALNTR-VRVGDGVSVYGF 286 Query: 282 PYHGLLTSDFTVTTGIVSSLSGILNDTRHLQISAAVQPGNSGGPLFDLTGAVVGVVAAKL 341 P GLL S+ T G V++ +G+ +DTR +QISA VQPGNSGGP+ D G +VGVV +KL Sbjct: 287 PLSGLLASNGNFTIGNVTATAGLADDTRMVQISAPVQPGNSGGPVIDQKGNIVGVVVSKL 346 Query: 342 DAVRMARATGTIPENINFAIKTGALRDFLDNSAVAYRTAEWREEMKKETAE---IARNAR 398 DA+ +A A +P+N+NFAIK+ ++FLD + + E + ++K T E +A A+ Sbjct: 347 DALGVASAIKDVPQNVNFAIKSSIAQNFLDTNGI-----ESKAKLKDATLEPAAVADVAK 401 Query: 399 GYTLLITC 406 G+T+ I C Sbjct: 402 GFTVRIEC 409 >ref|YP_421603.1| TPR repeat-containing protein [Magnetospirillum magneticum AMB-1] dbj|BAE51044.1| TPR repeat [Magnetospirillum magneticum AMB-1] Length = 556 Score = 176 bits (445), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 100/237 (42%), Positives = 148/237 (62%), Gaps = 10/237 (4%) Query: 178 ATKPAAAPPQQAAPGPTQKPARSG---TGTGFVVSSSGHVVTNHHVVGGCSEITGNLSGE 234 A++ P QQ+A P PA SG +G+GFVVS+ G V+TN HVV C IT + Sbjct: 325 ASRAPMPPGQQSATTPP--PATSGKISSGSGFVVSADGVVMTNAHVVEQCRSITIKPQ-D 381 Query: 235 APVKL-RLVSDDETNDLALLQAPTPFKDVVSLRQN-PILVGNGVVAIGYPYHGLLTSDFT 292 AP ++ L + D ND+ALL+ +V RQ+ P+ G+ VV IG+P LL+ + Sbjct: 382 APAQVVSLKAKDSANDMALLKTSLRLPEVARFRQDRPLRSGDEVVVIGFPLSSLLSREPN 441 Query: 293 VTTGIVSSLSGILNDTRHLQISAAVQPGNSGGPLFDLTGAVVGVVAAKLDAVRMARATGT 352 VT G+VS+L+G+ D RH QI+A VQ GNSGGPL D++G +VG+V +KL+A+++A TG Sbjct: 442 VTAGVVSALNGMRGDPRHYQITAPVQKGNSGGPLIDMSGNIVGIVTSKLNAMKIADKTGD 501 Query: 353 IPENINFAIKTGALRDFLDNSAVAYRTAEWREEMKKETAEIARNARGYTLLITCTVN 409 +P+NINFAIK R +LD++ V+Y+TAE ++ A++ + T+ I C + Sbjct: 502 LPQNINFAIKADLARSYLDSNGVSYQTAESSAQL--SVADVGERIKRVTVFIECRME 556 >ref|YP_001242278.1| hypothetical protein BBta_6462 [Bradyrhizobium sp. BTAi1] gb|ABQ38372.1| hypothetical protein BBta_6462 [Bradyrhizobium sp. BTAi1] Length = 381 Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 88/169 (52%), Positives = 111/169 (65%), Gaps = 2/169 (1%) Query: 22 NARGPYGSISVGNWKGGAFTNDKNGAFTHCSAGTTYQSGIFFMVSIAENGSWRLGFAHES 81 NA+GPYGSISV W GGAFT+D G FT C A +Y+SGI F V N +W L F H S Sbjct: 30 NAKGPYGSISVAGWSGGAFTDDNTGQFTSCVASASYKSGINFGVLALPNFNWALAFIHPS 89 Query: 82 WRLTAGEAFPLALTFDGQPAFNVYGMPLGTQLVNVEMPVNSALINQFRKARQMTAFAQGQ 141 W L+ G+ FP+ L+FDG+ ++NV G T +V V MP +S+LI FR AR M+AFAQG Sbjct: 90 WSLSQGQKFPIVLSFDGRTSYNVEGAVWSTTMVVVPMPNDSSLIKAFRAARTMSAFAQGN 149 Query: 142 LFQFNLNQTAQLLPALLNCVVSVKKNGVANAGEFAVATKPAAAPPQQAA 190 LFQFNLN TA LLP+L NCV + G+A A F + +P+A Q+ A Sbjct: 150 LFQFNLNGTAVLLPSLANCVRIINAGGLAAATNFNI--QPSAPLAQRPA 196 >ref|YP_001834656.1| TPR repeat-containing protein [Beijerinckia indica subsp. indica ATCC 9039] gb|ACB97167.1| Tetratricopeptide TPR_2 repeat protein [Beijerinckia indica subsp. indica ATCC 9039] Length = 403 Score = 170 bits (430), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 95/225 (42%), Positives = 140/225 (62%), Gaps = 6/225 (2%) Query: 184 APPQQAAPGPTQKPARSGT-GTGFVVSSSGHVVTNHHVVGGCSEITGNLSGEAP-VKLRL 241 +PP + ++G+ GTGF VS G++VTN HVV GC ++ SG +P + R+ Sbjct: 181 SPPARLPEAKNSDADKNGSSGTGFFVSPRGYIVTNAHVVNGCKDVQIT-SGLSPKISARI 239 Query: 242 VSDDETNDLALLQAPTPFKDVVSLRQNPILVGNGVVAIGYPYHGLLTSDFTVTTGIVSSL 301 ++ D NDLALL++ +V LR + +G V G+P GLL + + GIVS+L Sbjct: 240 LTQDSANDLALLKSDLRPNTLVPLRVG-VRIGENVAVFGFPLIGLLATSGNFSVGIVSAL 298 Query: 302 SGILNDTRHLQISAAVQPGNSGGPLFDLTGAVVGVVAAKLDAVRMARATGTIPENINFAI 361 +G+ +DTR+LQISA VQPGNSGGP+ D +G +VGVV AKLDA+ +A T +P+N+NFAI Sbjct: 299 AGLGDDTRYLQISAPVQPGNSGGPVLDQSGNIVGVVVAKLDAINVAAITKDVPQNVNFAI 358 Query: 362 KTGALRDFLDNSAVAYRTAEWREEMKKETAEIARNARGYTLLITC 406 KT L + LD + V Y T + + ++A++A A+ +LI C Sbjct: 359 KTSVLTNLLDANGVDYSTGSAGQFL--QSADLAERAKSIAVLIEC 401