BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0043.0046.p         (92 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_05058507.1| conserved hypothetical protein, putative [Ver...    35   4.9  

>ref|ZP_05058507.1| conserved hypothetical protein, putative [Verrucomicrobiae
           bacterium DG1235]
 gb|EDY83647.1| conserved hypothetical protein, putative [Verrucomicrobiae
           bacterium DG1235]
          Length = 816

 Score = 34.7 bits (78), Expect = 4.9,   Method: Composition-based stats.
 Identities = 21/49 (42%), Positives = 25/49 (51%), Gaps = 1/49 (2%)

Query: 12  FAAAFDHVRVEGIGPRRRNGGNLRPPGDGKGCRRARDQYDRGNACDDPQ 60
           F++AFDHV  + IG     G NL P G GK   R    +  GN  D PQ
Sbjct: 74  FSSAFDHVGNDWIGNDADKGYNLSPRGTGKHEYRGWPNFGNGNF-DHPQ 121