BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0043.0037.p (315 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_772778.1| hypothetical protein blr6138 [Bradyrhizobium ja... 593 e-167 ref|ZP_08627312.1| carbon monoxide dehydrogenase D protein [Brad... 555 e-156 ref|YP_001238739.1| putative ATPase [Bradyrhizobium sp. BTAi1] >... 548 e-154 ref|YP_001204400.1| putative ATPase [Bradyrhizobium sp. ORS 278]... 547 e-153 ref|YP_484341.1| AAA_5 ATPase [Rhodopseudomonas palustris HaA2] ... 545 e-153 >ref|NP_772778.1| hypothetical protein blr6138 [Bradyrhizobium japonicum USDA 110] dbj|BAC51403.1| blr6138 [Bradyrhizobium japonicum USDA 110] Length = 342 Score = 593 bits (1529), Expect = e-167, Method: Compositional matrix adjust. Identities = 291/314 (92%), Positives = 302/314 (96%) Query: 1 VADTRPTASIETVESGLAAQGYIASRQIATAVYLSQQIEKPILVEGPAGVGKTELAKAIA 60 VA+ +P+ +IE VESGLAAQGYIASRQIATAVYLSQQIEKPILVEGPAGVGKTELAKAIA Sbjct: 28 VAEQKPSTAIEAVESGLAAQGYIASRQIATAVYLSQQIEKPILVEGPAGVGKTELAKAIA 87 Query: 61 AWRGMKMIRLQCYEGLDEAKALYEWKYAKQLLYTQILKDKLGEVLGGAQSLAAALDQLHT 120 AWRGMKMIRLQCYEGLDEAKALYEWKYAKQLLYTQILKDKLGEVLGGAQ+L AALDQLH Sbjct: 88 AWRGMKMIRLQCYEGLDEAKALYEWKYAKQLLYTQILKDKLGEVLGGAQTLHAALDQLHD 147 Query: 121 FGDVFFSKEFVEPRPLLQALEQPAGCVLLIDEIDKSDAEFESLLLEILSDFQVTIPELGT 180 FGDVFFSKEFVEPRPLLQALEQP GCVLLIDEIDKSDAEFESLLLEILSDFQVTIPELGT Sbjct: 148 FGDVFFSKEFVEPRPLLQALEQPGGCVLLIDEIDKSDAEFESLLLEILSDFQVTIPELGT 207 Query: 181 VSAVAPPTVILTSNSERDLGDALKRRCLHLHIGFPEQKLEERIVESRVPGISQTLRKQMV 240 VSAV PPTVILTSNSERDLGDALKRRCLHLHIGFPEQ+LEERIVESRVPGISQTLR+QMV Sbjct: 208 VSAVTPPTVILTSNSERDLGDALKRRCLHLHIGFPEQRLEERIVESRVPGISQTLRRQMV 267 Query: 241 GFIHEIRSLDLKKLPSVSEAIDWARVLVLLQASELDHEIVKDTLNVLLKYEADIEAATPQ 300 GFIHEIRSLDLKKLPSVSE IDWARVLVLLQASELD EIVKDTLNVLLKYEADIEAA PQ Sbjct: 268 GFIHEIRSLDLKKLPSVSETIDWARVLVLLQASELDTEIVKDTLNVLLKYEADIEAAQPQ 327 Query: 301 ISSFIAKASRQGVF 314 +++FIAKA+R VF Sbjct: 328 VTTFIAKAARSNVF 341 >ref|ZP_08627312.1| carbon monoxide dehydrogenase D protein [Bradyrhizobiaceae bacterium SG-6C] gb|EGP09938.1| carbon monoxide dehydrogenase D protein [Bradyrhizobiaceae bacterium SG-6C] Length = 315 Score = 555 bits (1431), Expect = e-156, Method: Compositional matrix adjust. Identities = 266/314 (84%), Positives = 296/314 (94%) Query: 1 VADTRPTASIETVESGLAAQGYIASRQIATAVYLSQQIEKPILVEGPAGVGKTELAKAIA 60 + + +P ASI+ VE GLA+ GYI++RQI+TAVYLS++IEKPILVEGPAGVGKTELAKAIA Sbjct: 1 MTEYQPAASIDAVEQGLASAGYISNRQISTAVYLSEKIEKPILVEGPAGVGKTELAKAIA 60 Query: 61 AWRGMKMIRLQCYEGLDEAKALYEWKYAKQLLYTQILKDKLGEVLGGAQSLAAALDQLHT 120 AWRG+K+IRLQCYEGLDEAKALYEWKYAKQLLYTQILKDKLGEVLG A++L AAL +LH Sbjct: 61 AWRGLKLIRLQCYEGLDEAKALYEWKYAKQLLYTQILKDKLGEVLGEAETLPAALKKLHD 120 Query: 121 FGDVFFSKEFVEPRPLLQALEQPAGCVLLIDEIDKSDAEFESLLLEILSDFQVTIPELGT 180 FGDVFFSKEFVEPRPLLQALEQP GCVLL+DEIDKSDAEFESLLLEILSDFQVTIPELGT Sbjct: 121 FGDVFFSKEFVEPRPLLQALEQPKGCVLLVDEIDKSDAEFESLLLEILSDFQVTIPELGT 180 Query: 181 VSAVAPPTVILTSNSERDLGDALKRRCLHLHIGFPEQKLEERIVESRVPGISQTLRKQMV 240 +SA+APPTVILTSNSERDLGDALKRRCLHLHIGFPEQ+LEERIVESRVPGISQTLR+Q+V Sbjct: 181 ISAIAPPTVILTSNSERDLGDALKRRCLHLHIGFPEQRLEERIVESRVPGISQTLRRQIV 240 Query: 241 GFIHEIRSLDLKKLPSVSEAIDWARVLVLLQASELDHEIVKDTLNVLLKYEADIEAATPQ 300 FI+++R+LDLKKLPSVSEAIDWARVLVLLQASELDHE+VKDTLNVLLKYEADIE PQ Sbjct: 241 SFINDVRTLDLKKLPSVSEAIDWARVLVLLQASELDHEMVKDTLNVLLKYEADIETTLPQ 300 Query: 301 ISSFIAKASRQGVF 314 +S+FI K+ R+ VF Sbjct: 301 VSAFIGKSRRENVF 314 >ref|YP_001238739.1| putative ATPase [Bradyrhizobium sp. BTAi1] gb|ABQ34833.1| putative ATPase [Bradyrhizobium sp. BTAi1] Length = 319 Score = 548 bits (1413), Expect = e-154, Method: Compositional matrix adjust. Identities = 264/302 (87%), Positives = 287/302 (95%) Query: 13 VESGLAAQGYIASRQIATAVYLSQQIEKPILVEGPAGVGKTELAKAIAAWRGMKMIRLQC 72 VE+GLAAQGYIASRQIATAVYLSQ I+KPILVEGPAGVGKTELAKAIAAWRG+KMIRLQC Sbjct: 17 VEAGLAAQGYIASRQIATAVYLSQAIDKPILVEGPAGVGKTELAKAIAAWRGLKMIRLQC 76 Query: 73 YEGLDEAKALYEWKYAKQLLYTQILKDKLGEVLGGAQSLAAALDQLHTFGDVFFSKEFVE 132 YEGLDEAKALYEWKYAKQLLYTQILKDKLGEVLGGAQ+L AAL QLH FGDVFFSKEFVE Sbjct: 77 YEGLDEAKALYEWKYAKQLLYTQILKDKLGEVLGGAQTLHAALSQLHDFGDVFFSKEFVE 136 Query: 133 PRPLLQALEQPAGCVLLIDEIDKSDAEFESLLLEILSDFQVTIPELGTVSAVAPPTVILT 192 PRPLLQAL +P GCVLLIDEIDKSDAEFESLLLEILSDFQVTIPELG+++A +PPTVILT Sbjct: 137 PRPLLQALLEPEGCVLLIDEIDKSDAEFESLLLEILSDFQVTIPELGSIAAASPPTVILT 196 Query: 193 SNSERDLGDALKRRCLHLHIGFPEQKLEERIVESRVPGISQTLRKQMVGFIHEIRSLDLK 252 SNSER+LGDALKRRCLHLHIGFPEQ+LEERIVESRVPGISQTLR+Q+V FIH+IRSLDLK Sbjct: 197 SNSERNLGDALKRRCLHLHIGFPEQRLEERIVESRVPGISQTLRRQLVAFIHDIRSLDLK 256 Query: 253 KLPSVSEAIDWARVLVLLQASELDHEIVKDTLNVLLKYEADIEAATPQISSFIAKASRQG 312 K PSVSE IDWARVLVLLQA+EL H++VKDTLNVLLKYE+DIE A PQ+++F+AKA RQ Sbjct: 257 KQPSVSETIDWARVLVLLQAAELGHDLVKDTLNVLLKYESDIEVALPQVTTFVAKAQRQN 316 Query: 313 VF 314 +F Sbjct: 317 IF 318 >ref|YP_001204400.1| putative ATPase [Bradyrhizobium sp. ORS 278] emb|CAL76163.1| putative ATPase [Bradyrhizobium sp. ORS 278] Length = 319 Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust. Identities = 266/313 (84%), Positives = 289/313 (92%) Query: 2 ADTRPTASIETVESGLAAQGYIASRQIATAVYLSQQIEKPILVEGPAGVGKTELAKAIAA 61 A + ASI+ VE+GLAAQGYIASRQIATAVYLSQ I+KPILVEGPAGVGKTELAKAIAA Sbjct: 6 APSPAVASIQAVEAGLAAQGYIASRQIATAVYLSQAIDKPILVEGPAGVGKTELAKAIAA 65 Query: 62 WRGMKMIRLQCYEGLDEAKALYEWKYAKQLLYTQILKDKLGEVLGGAQSLAAALDQLHTF 121 WRG+KMIRLQCYEGLDEAKALYEWKYAKQLLYTQILKDKLGEVLGGAQ+L AAL QL F Sbjct: 66 WRGLKMIRLQCYEGLDEAKALYEWKYAKQLLYTQILKDKLGEVLGGAQTLHAALGQLQDF 125 Query: 122 GDVFFSKEFVEPRPLLQALEQPAGCVLLIDEIDKSDAEFESLLLEILSDFQVTIPELGTV 181 GDVFFSKEFVEPRPLLQAL +P GCVLLIDEIDKSDAEFESLLLEILSDFQVTIPELG++ Sbjct: 126 GDVFFSKEFVEPRPLLQALLEPNGCVLLIDEIDKSDAEFESLLLEILSDFQVTIPELGSI 185 Query: 182 SAVAPPTVILTSNSERDLGDALKRRCLHLHIGFPEQKLEERIVESRVPGISQTLRKQMVG 241 +A PTVILTSNSER+LGDALKRRCLHLHIGFPEQ+LEERIVESRVPGISQ LR+Q+V Sbjct: 186 AAAKAPTVILTSNSERNLGDALKRRCLHLHIGFPEQRLEERIVESRVPGISQILRRQLVA 245 Query: 242 FIHEIRSLDLKKLPSVSEAIDWARVLVLLQASELDHEIVKDTLNVLLKYEADIEAATPQI 301 FIH+IR+LDLKK PSVSE IDWARVLVLLQA+EL HE+VKDTLNVLLKYE+DIE A PQ+ Sbjct: 246 FIHDIRTLDLKKQPSVSETIDWARVLVLLQAAELGHEVVKDTLNVLLKYESDIEVAQPQV 305 Query: 302 SSFIAKASRQGVF 314 +SF+AKA RQ +F Sbjct: 306 TSFVAKAQRQNIF 318 >ref|YP_484341.1| AAA_5 ATPase [Rhodopseudomonas palustris HaA2] gb|ABD05430.1| AAA_5 ATPase [Rhodopseudomonas palustris HaA2] Length = 315 Score = 545 bits (1405), Expect = e-153, Method: Compositional matrix adjust. Identities = 258/310 (83%), Positives = 289/310 (93%) Query: 6 PTASIETVESGLAAQGYIASRQIATAVYLSQQIEKPILVEGPAGVGKTELAKAIAAWRGM 65 PT+SI+ V +GLA+ GYIASRQIATAVYL+++IEKPILVEGPAGVGKTELAKA+AAWRG+ Sbjct: 6 PTSSIDAVTAGLASVGYIASRQIATAVYLAEKIEKPILVEGPAGVGKTELAKALAAWRGL 65 Query: 66 KMIRLQCYEGLDEAKALYEWKYAKQLLYTQILKDKLGEVLGGAQSLAAALDQLHTFGDVF 125 +MIR+QCYEGLDEAKALYEWKYAKQLLYTQILKDKLGEVLGGA++LA ALD+LH FGDVF Sbjct: 66 RMIRMQCYEGLDEAKALYEWKYAKQLLYTQILKDKLGEVLGGAETLAGALDRLHDFGDVF 125 Query: 126 FSKEFVEPRPLLQALEQPAGCVLLIDEIDKSDAEFESLLLEILSDFQVTIPELGTVSAVA 185 FSKEFVEPRPLLQALEQP GCVLL+DEIDKSDAEFESLLLEILSD+QV+IPELGT+ AV Sbjct: 126 FSKEFVEPRPLLQALEQPNGCVLLVDEIDKSDAEFESLLLEILSDYQVSIPELGTIRAVV 185 Query: 186 PPTVILTSNSERDLGDALKRRCLHLHIGFPEQKLEERIVESRVPGISQTLRKQMVGFIHE 245 P V+LTSN ERDL DALKRRCLHLHIGFPEQKLEERIVESRVPG S+TLR+Q+VGFI++ Sbjct: 186 KPLVLLTSNGERDLSDALKRRCLHLHIGFPEQKLEERIVESRVPGASETLRRQLVGFINQ 245 Query: 246 IRSLDLKKLPSVSEAIDWARVLVLLQASELDHEIVKDTLNVLLKYEADIEAATPQISSFI 305 +R+LDLKKLPSVSE IDWARVLVLLQ++ELDHE VKDTLNVLLKYEADIE ATPQ++ F+ Sbjct: 246 VRALDLKKLPSVSETIDWARVLVLLQSTELDHETVKDTLNVLLKYEADIETATPQVAGFV 305 Query: 306 AKASRQGVFS 315 AKA R G F Sbjct: 306 AKAGRAGTFG 315