BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0043.0023.p (317 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_773424.1| dihydrodipicolinate synthase [Bradyrhizobium ja... 358 5e-97 ref|YP_567797.1| dihydrodipicolinate synthase [Rhodopseudomonas ... 300 1e-79 ref|NP_948339.1| putative dihydrodipicolinate synthase [Rhodopse... 292 4e-77 ref|YP_001992384.1| dihydrodipicolinate synthase [Rhodopseudomon... 292 6e-77 ref|YP_001242167.1| dihydrodipicolinate synthase [Bradyrhizobium... 280 2e-73 >ref|NP_773424.1| dihydrodipicolinate synthase [Bradyrhizobium japonicum USDA 110] dbj|BAC52049.1| dihydrodipicolinate synthase [Bradyrhizobium japonicum USDA 110] Length = 305 Score = 358 bits (920), Expect = 5e-97, Method: Compositional matrix adjust. Identities = 181/296 (61%), Positives = 223/296 (75%) Query: 20 AKWLSGFIPDLPTPFNHQDQIDIEAFGRLCERQIAAGASALAVGETAGESSTLEPTERAQ 79 A W +GFIPDLPTPF+ D ID++AF LCERQIAAG A+ V ETAGE+ TL P E+ Sbjct: 6 AAWFTGFIPDLPTPFDAADTIDLKAFTALCERQIAAGVPAIVVCETAGEAPTLSPAEQEL 65 Query: 80 LVRIAAHVARKRVGIIAGAGSNATDRAVAFTRAPEAAGADAIMSVVPYYNKPMPQGIAAH 139 ++R A VAR RV IIAGA SNAT +A+A R EAAGADA+M+VVP YNKPM +G+ AH Sbjct: 66 VIRAAVDVARGRVRIIAGAMSNATSQAIALARCAEAAGADAVMAVVPAYNKPMQEGMLAH 125 Query: 140 FRAVAAATTLPVILHDIPARTVKGLADETLLELAHSPRFVGLRDGNSDVARLRRLRPRLP 199 FRA+A AT LPVILHDIP+RT++ LADETL+ L S +FVGLRDG+ D+AR RL LP Sbjct: 126 FRAIAGATGLPVILHDIPSRTLRPLADETLVRLVESRQFVGLRDGSCDIARPMRLARLLP 185 Query: 200 ATFRMLTGDDATSLAYMAAGGDGCISSVSNIAPDLWVAVARHLREGRLYQARELHQRLVP 259 A FR+L+GDD T+ Y+A+GGDG IS VSNIAPDL + +R+GRL AR LH+RL+P Sbjct: 186 AGFRLLSGDDVTAFGYIASGGDGAISEVSNIAPDLCRMIFSQVRQGRLQSARYLHRRLIP 245 Query: 260 LATLLEREHPAALKFALALLGFMQPATRLPIVQLNASAKAEVAQAMTDIADEYLAE 315 L T L ++ PAALK AL++LG M PATRLPIV L+A+A+ EV +A IADE L + Sbjct: 246 LITCLSKDSPAALKSALSVLGLMSPATRLPIVPLDAAAQREVIRAFAAIADEELID 301 >ref|YP_567797.1| dihydrodipicolinate synthase [Rhodopseudomonas palustris BisB5] gb|ABE37896.1| dihydrodipicolinate synthase [Rhodopseudomonas palustris BisB5] Length = 315 Score = 300 bits (769), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 152/279 (54%), Positives = 194/279 (69%), Gaps = 1/279 (0%) Query: 19 SAKWLSGFIPDLPTPFNHQDQIDIEAFGRLCERQIAAGASALAVGETAGESSTLEPTERA 78 S WL+GFI DLPTPF+ D+ID +F LCE+QI +GA A+ V ET GE+STL TE Sbjct: 8 STPWLTGFIADLPTPFDANDRIDWGSFEMLCEQQIRSGARAVLVAETMGEASTLTLTEHD 67 Query: 79 QLVRIAAHVARKRVGIIAGAGSNATDRAVAFTRAPEAAGADAIMSVVPYYNKPMPQGIAA 138 L+ A ++ RV +IAGAGSN+T +A+ TR EA GADA+MSVVPYYNKPM GI A Sbjct: 68 ALIGAAVAISCGRVAVIAGAGSNSTSQAIDLTRRAEANGADAVMSVVPYYNKPMQSGIVA 127 Query: 139 HFRAVAAATTLPVILHDIPARTVKGLADETLLELAHSPRFVGLRDGNSDVARLRRLRPRL 198 HF A+A AT LP+ILHD P RT + L+DET+ LA PRF G +D D+ARL RLR +L Sbjct: 128 HFSAIAQATALPIILHDAPGRTARELSDETMQRLADIPRFAGAKDATGDIARLVRLRSKL 187 Query: 199 PATFRMLTGDDATSLAYMAAGGDGCISSVSNIAPDLWVAVARHLREGRLYQARELHQRLV 258 P F +L+GDD+T+ AY+AAGGDGC+S +SNIAPDL ++ ++ R+ L +R L L Sbjct: 188 PPDFHLLSGDDSTAGAYLAAGGDGCVSILSNIAPDLCRSIYQYCRQADLVSSRTLAAHLA 247 Query: 259 PLA-TLLEREHPAALKFALALLGFMQPATRLPIVQLNAS 296 PL +L PAALK+AL LLG P RLP+V+L+ S Sbjct: 248 PLGQAVLPDATPAALKYALCLLGLAAPWVRLPLVELDQS 286 >ref|NP_948339.1| putative dihydrodipicolinate synthase [Rhodopseudomonas palustris CGA009] emb|CAE28439.1| putative dihydrodipicolinate synthase [Rhodopseudomonas palustris CGA009] Length = 307 Score = 292 bits (748), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 156/297 (52%), Positives = 212/297 (71%) Query: 19 SAKWLSGFIPDLPTPFNHQDQIDIEAFGRLCERQIAAGASALAVGETAGESSTLEPTERA 78 + WL+G+IPDLPTPFN ID+ + RL R I++GASA+ + TAGE+STL P E+ Sbjct: 7 TTDWLTGYIPDLPTPFNEAGDIDLVSLARLIARAISSGASAVVICGTAGEASTLTPAEQT 66 Query: 79 QLVRIAAHVARKRVGIIAGAGSNATDRAVAFTRAPEAAGADAIMSVVPYYNKPMPQGIAA 138 ++ A +A +R+ +IAGAGSNAT +A+ ++AGADA++SVVPYYNKP GI A Sbjct: 67 AVISEAVGIAGRRIRVIAGAGSNATSQAIELAARAQSAGADAVLSVVPYYNKPTQDGIRA 126 Query: 139 HFRAVAAATTLPVILHDIPARTVKGLADETLLELAHSPRFVGLRDGNSDVARLRRLRPRL 198 HF A+ A LPV+LHD+P+RT + LAD+T++ LA S RF GL DG+ DV R RLRPRL Sbjct: 127 HFDAIGRAIELPVLLHDVPSRTARPLADDTIVRLARSGRFTGLVDGSGDVLRPLRLRPRL 186 Query: 199 PATFRMLTGDDATSLAYMAAGGDGCISSVSNIAPDLWVAVARHLREGRLYQARELHQRLV 258 PA F+ML+GDD TS ++A+GGDG +S V+NIA DL + + R+GRL AR L +RL+ Sbjct: 187 PAGFQMLSGDDTTSFGFLASGGDGAVSEVANIASDLCRTIHTYCRQGRLQSARYLQKRLL 246 Query: 259 PLATLLEREHPAALKFALALLGFMQPATRLPIVQLNASAKAEVAQAMTDIADEYLAE 315 PLA+ L+++ PA+LK+AL LLG ++P TRLPIV L + A +A + +ADE LAE Sbjct: 247 PLASSLDQDSPASLKYALNLLGLIRPDTRLPIVPLAGGSAAHLAAVLAAMADEDLAE 303 >ref|YP_001992384.1| dihydrodipicolinate synthase [Rhodopseudomonas palustris TIE-1] gb|ACF01909.1| dihydrodipicolinate synthase [Rhodopseudomonas palustris TIE-1] Length = 307 Score = 292 bits (747), Expect = 6e-77, Method: Compositional matrix adjust. Identities = 157/295 (53%), Positives = 211/295 (71%) Query: 21 KWLSGFIPDLPTPFNHQDQIDIEAFGRLCERQIAAGASALAVGETAGESSTLEPTERAQL 80 WL+G+IPDLPTPFN ID+ + RL R I++GASA+ + TAGE+STL P E+ + Sbjct: 9 DWLTGYIPDLPTPFNEAGDIDLVSLARLIARAISSGASAVVICGTAGEASTLTPAEQTAV 68 Query: 81 VRIAAHVARKRVGIIAGAGSNATDRAVAFTRAPEAAGADAIMSVVPYYNKPMPQGIAAHF 140 + A +A +R+ +IAGAGSNAT +A+ ++AGADA++SVVPYYNKP GI AHF Sbjct: 69 ISEAVGIAGRRIRVIAGAGSNATGQAIELAARAQSAGADAVLSVVPYYNKPTQDGIHAHF 128 Query: 141 RAVAAATTLPVILHDIPARTVKGLADETLLELAHSPRFVGLRDGNSDVARLRRLRPRLPA 200 A+ A LPV+LHD+P+RT + LAD+T++ LA S RF GL DG+ DV R RLRPRLPA Sbjct: 129 DAIGRAIELPVLLHDVPSRTARPLADDTIVRLARSGRFTGLVDGSGDVPRPLRLRPRLPA 188 Query: 201 TFRMLTGDDATSLAYMAAGGDGCISSVSNIAPDLWVAVARHLREGRLYQARELHQRLVPL 260 F+ML+GDD TS ++A+GGDG IS V+NIA DL + + R+GRL AR L +RL+PL Sbjct: 189 GFQMLSGDDTTSFGFLASGGDGAISEVANIASDLCRTIHTYCRQGRLQSARYLQKRLLPL 248 Query: 261 ATLLEREHPAALKFALALLGFMQPATRLPIVQLNASAKAEVAQAMTDIADEYLAE 315 A+ L+++ PA+LK+AL LLG ++P TRLPIV L + A +A + +ADE LAE Sbjct: 249 ASSLDQDSPASLKYALNLLGLIRPDTRLPIVPLAGDSAAHLAAVLAAMADEDLAE 303 >ref|YP_001242167.1| dihydrodipicolinate synthase [Bradyrhizobium sp. BTAi1] gb|ABQ38261.1| dihydrodipicolinate synthase (DHDPS) [Bradyrhizobium sp. BTAi1] Length = 309 Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 158/273 (57%), Positives = 192/273 (70%), Gaps = 1/273 (0%) Query: 22 WLSGFIPDLPTPFNHQDQIDIEAFGRLCERQIAAGASALAVGETAGESSTLEPTERAQLV 81 WL+G I D+PTPF+ +DI A RLCERQI AGASA+ V ETAGE+STL ER ++ Sbjct: 9 WLAGAIADIPTPFDRSGALDIAALARLCERQIEAGASAILVCETAGEASTLTAAEREAVI 68 Query: 82 RIAAHVARKRVGIIAGAGSNATDRAVAFTRAPEAAGADAIMSVVPYYNKPMPQGIAAHFR 141 R A VA R+ +IAGAGSN+T +AV TR AAGADAIMSVVPYYN+P +GI AHFR Sbjct: 69 RTAVTVACNRIHVIAGAGSNSTLQAVQNTRQAAAAGADAIMSVVPYYNRPTAEGIYAHFR 128 Query: 142 AVAAATTLPVILHDIPARTVKGLADETLLELAHSPRFVGLRDGNSDVARLRRLRPRLPAT 201 AV AT LP+ILHD PART +GL DETL+ LA +F+GLRD D+AR+ LR R+P Sbjct: 129 AVGDATALPIILHDCPARTGRGLPDETLIRLAQWAQFIGLRDSTGDIARVVHLRARVPLG 188 Query: 202 FRMLTGDDATSLAYMAAGGDGCISSVSNIAPDLWVAVARHLREGRLYQARELHQRLVPLA 261 FR+L GDD T+LAY AAGGDGC S +NIAP L A+ R GR AR LHQ+L+ L+ Sbjct: 189 FRLL-GDDLTALAYAAAGGDGCFSLAANIAPQLCNALLESCRRGRWRTARRLHQQLLQLS 247 Query: 262 TLLEREHPAALKFALALLGFMQPATRLPIVQLN 294 RE PAALK+AL+L G P RLP+ +L+ Sbjct: 248 EATSRELPAALKYALSLQGLAMPHVRLPLTELD 280