BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0043.0003.p (288 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_767625.1| hypothetical protein blr0985 [Bradyrhizobium ja... 553 e-155 ref|YP_533064.1| hypothetical protein RPC_3203 [Rhodopseudomonas... 524 e-147 ref|YP_001208685.1| hypothetical protein BRADO6877 [Bradyrhizobi... 521 e-146 ref|YP_001236847.1| hypothetical protein BBta_0673 [Bradyrhizobi... 521 e-146 ref|YP_004109688.1| hypothetical protein Rpdx1_3384 [Rhodopseudo... 514 e-144 >ref|NP_767625.1| hypothetical protein blr0985 [Bradyrhizobium japonicum USDA 110] dbj|BAC46250.1| blr0985 [Bradyrhizobium japonicum USDA 110] Length = 288 Score = 553 bits (1424), Expect = e-155, Method: Compositional matrix adjust. Identities = 257/288 (89%), Positives = 273/288 (94%) Query: 1 MSDKAVITCALNGVLTDPKQHNVPVTPEQMAREARAAFNAGASIMHIHLRQQEPNKGHLP 60 MSDKAVITCALNGVLTDPKQHNVPVTPEQMAREARAAF+AGASIMHIHLRQQ PNKGHLP Sbjct: 1 MSDKAVITCALNGVLTDPKQHNVPVTPEQMAREARAAFDAGASIMHIHLRQQAPNKGHLP 60 Query: 61 SWDVGVSKEIQQAIREACPGVIINHTTGTSGPNYQGALDCVRETRPEIAACNAGSLNYLK 120 SW+VGVSKEIQQAIREACPGVIINHT+G SGPNY GALDC+RET+PEIAACNAGSLNYLK Sbjct: 61 SWEVGVSKEIQQAIREACPGVIINHTSGVSGPNYSGALDCIRETKPEIAACNAGSLNYLK 120 Query: 121 VKADNTWAWPPMMFDNAVEKVQDYLDVMKAAGTIPEFECFDVGIVRCVGMYRQTGMYSGP 180 VKADNTWAWPPMMFDNAVEKV+DYLDVM A GTIPEFECFDVGIVRCVGMY Q GMY GP Sbjct: 121 VKADNTWAWPPMMFDNAVEKVKDYLDVMNAVGTIPEFECFDVGIVRCVGMYTQVGMYKGP 180 Query: 181 LEYNFVMGVASGMPADPELLPILLRLKAPEAHWQVTAIGRAEIWPLHQRAADLGGHLRSG 240 LEYNFVMGVASGMP+DP+LLPIL++LK PEAHWQVTAIGR EIWPLHQR A+LGGHLR+G Sbjct: 181 LEYNFVMGVASGMPSDPDLLPILIKLKRPEAHWQVTAIGREEIWPLHQRCAELGGHLRTG 240 Query: 241 LEDTFYLGDGTKVTSNGQLVEGLAACARRAGREIASPAEARQIFGVRQ 288 LEDTFYL DGTKVTSNGQL+E +AACARRAGREIASPAEAR+IFG + Sbjct: 241 LEDTFYLADGTKVTSNGQLIEAVAACARRAGREIASPAEARKIFGTNR 288 >ref|YP_533064.1| hypothetical protein RPC_3203 [Rhodopseudomonas palustris BisB18] gb|ABD88745.1| protein of unknown function DUF849 [Rhodopseudomonas palustris BisB18] Length = 316 Score = 524 bits (1350), Expect = e-147, Method: Compositional matrix adjust. Identities = 239/288 (82%), Positives = 271/288 (94%) Query: 1 MSDKAVITCALNGVLTDPKQHNVPVTPEQMAREARAAFNAGASIMHIHLRQQEPNKGHLP 60 MS KAVITC+LNGVLTDPKQH+VPVTP++MAREA++A++AGAS++HIHLR+QEP +GHLP Sbjct: 29 MSTKAVITCSLNGVLTDPKQHHVPVTPQEMAREAKSAYDAGASVVHIHLRRQEPGQGHLP 88 Query: 61 SWDVGVSKEIQQAIREACPGVIINHTTGTSGPNYQGALDCVRETRPEIAACNAGSLNYLK 120 SWDV VS+EIQ+AIR+ACPG+IINHTTGT+GPNYQGALDCVRET+PE+AACNAGSLNYLK Sbjct: 89 SWDVDVSREIQEAIRQACPGIIINHTTGTAGPNYQGALDCVRETKPEMAACNAGSLNYLK 148 Query: 121 VKADNTWAWPPMMFDNAVEKVQDYLDVMKAAGTIPEFECFDVGIVRCVGMYRQTGMYSGP 180 VKAD TWAWPPMMFDNAVEK+QDYLDVM AGT+PEFECFDVGIVRCVGMYRQTGMYSGP Sbjct: 149 VKADKTWAWPPMMFDNAVEKIQDYLDVMNEAGTMPEFECFDVGIVRCVGMYRQTGMYSGP 208 Query: 181 LEYNFVMGVASGMPADPELLPILLRLKAPEAHWQVTAIGRAEIWPLHQRAADLGGHLRSG 240 L+YNFVMGVASGMPADP+LLPILL+LK +A WQVTAIGRAEIWPLHQR A+LGGHLR+G Sbjct: 209 LDYNFVMGVASGMPADPDLLPILLKLKTKDAQWQVTAIGRAEIWPLHQRCAELGGHLRTG 268 Query: 241 LEDTFYLGDGTKVTSNGQLVEGLAACARRAGREIASPAEARQIFGVRQ 288 LEDTFYL G KVTSNGQL+E +A CARRAGR IASPAEAR+IFG++ Sbjct: 269 LEDTFYLASGEKVTSNGQLIEEIAGCARRAGRGIASPAEAREIFGLKH 316 >ref|YP_001208685.1| hypothetical protein BRADO6877 [Bradyrhizobium sp. ORS 278] emb|CAL80470.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278] Length = 288 Score = 521 bits (1342), Expect = e-146, Method: Compositional matrix adjust. Identities = 252/286 (88%), Positives = 273/286 (95%) Query: 1 MSDKAVITCALNGVLTDPKQHNVPVTPEQMAREARAAFNAGASIMHIHLRQQEPNKGHLP 60 MS+KAVITCALNGVLTDP+QHNVPVTPE+MAREAR A++AGA+IMHIHLRQQ P KGHLP Sbjct: 1 MSNKAVITCALNGVLTDPRQHNVPVTPEEMAREARRAYDAGAAIMHIHLRQQAPGKGHLP 60 Query: 61 SWDVGVSKEIQQAIREACPGVIINHTTGTSGPNYQGALDCVRETRPEIAACNAGSLNYLK 120 SW+V VS+EIQQAIREACPGVIINHT+G SGP+YQGALDC+RETRPEIAACNAGSLNYLK Sbjct: 61 SWEVKVSREIQQAIREACPGVIINHTSGVSGPSYQGALDCIRETRPEIAACNAGSLNYLK 120 Query: 121 VKADNTWAWPPMMFDNAVEKVQDYLDVMKAAGTIPEFECFDVGIVRCVGMYRQTGMYSGP 180 VKADN+WAWPPMMFDN+VEK+ DYL VMKA TIPEFECFDVGIVRCVGMYRQTGMY+GP Sbjct: 121 VKADNSWAWPPMMFDNSVEKIGDYLAVMKAVNTIPEFECFDVGIVRCVGMYRQTGMYAGP 180 Query: 181 LEYNFVMGVASGMPADPELLPILLRLKAPEAHWQVTAIGRAEIWPLHQRAADLGGHLRSG 240 LEYNFVMGVASGMPADPELLPILL+LK PEAHWQVTAIGRAEIWPLHQR A+LGGHLR+G Sbjct: 181 LEYNFVMGVASGMPADPELLPILLKLKLPEAHWQVTAIGRAEIWPLHQRCAELGGHLRTG 240 Query: 241 LEDTFYLGDGTKVTSNGQLVEGLAACARRAGREIASPAEARQIFGV 286 LEDTFYLGDGTKVTSNGQL+E +AACARRAGREIASPAEARQ+FG Sbjct: 241 LEDTFYLGDGTKVTSNGQLIEAIAACARRAGREIASPAEARQMFGT 286 >ref|YP_001236847.1| hypothetical protein BBta_0673 [Bradyrhizobium sp. BTAi1] gb|ABQ32941.1| hypothetical protein BBta_0673 [Bradyrhizobium sp. BTAi1] Length = 288 Score = 521 bits (1341), Expect = e-146, Method: Compositional matrix adjust. Identities = 252/286 (88%), Positives = 271/286 (94%) Query: 1 MSDKAVITCALNGVLTDPKQHNVPVTPEQMAREARAAFNAGASIMHIHLRQQEPNKGHLP 60 MS+KAVITCALNGVLTDP+QH+VPVTPE+MAREAR AF+AGA+IMHIHLRQQ P KGHLP Sbjct: 1 MSNKAVITCALNGVLTDPRQHHVPVTPEEMAREARRAFDAGAAIMHIHLRQQAPGKGHLP 60 Query: 61 SWDVGVSKEIQQAIREACPGVIINHTTGTSGPNYQGALDCVRETRPEIAACNAGSLNYLK 120 SW+V VS+EIQQAIREACPGVIINHT+G SGPNYQGALDC+RETRPEIAACNAGSLNYLK Sbjct: 61 SWEVSVSREIQQAIREACPGVIINHTSGVSGPNYQGALDCIRETRPEIAACNAGSLNYLK 120 Query: 121 VKADNTWAWPPMMFDNAVEKVQDYLDVMKAAGTIPEFECFDVGIVRCVGMYRQTGMYSGP 180 VKADN+WAWPPMMFDN+VEK++DYL MK A TIPEFECFDVGIVRCVGMYRQTGMY GP Sbjct: 121 VKADNSWAWPPMMFDNSVEKIEDYLAAMKDAHTIPEFECFDVGIVRCVGMYRQTGMYGGP 180 Query: 181 LEYNFVMGVASGMPADPELLPILLRLKAPEAHWQVTAIGRAEIWPLHQRAADLGGHLRSG 240 LEYNFVMGVASGMPADPELLPILLRLK PEAHWQVTAIGRAEIWPLHQR A+LGGHLR+G Sbjct: 181 LEYNFVMGVASGMPADPELLPILLRLKLPEAHWQVTAIGRAEIWPLHQRCAELGGHLRTG 240 Query: 241 LEDTFYLGDGTKVTSNGQLVEGLAACARRAGREIASPAEARQIFGV 286 LEDTFYL DGTKVTSNGQL+E +AACARRAGREIASPAEARQ+FG Sbjct: 241 LEDTFYLADGTKVTSNGQLIEAIAACARRAGREIASPAEARQMFGT 286 >ref|YP_004109688.1| hypothetical protein Rpdx1_3384 [Rhodopseudomonas palustris DX-1] gb|ADU44955.1| protein of unknown function DUF849 [Rhodopseudomonas palustris DX-1] Length = 288 Score = 514 bits (1324), Expect = e-144, Method: Compositional matrix adjust. Identities = 246/286 (86%), Positives = 269/286 (94%) Query: 1 MSDKAVITCALNGVLTDPKQHNVPVTPEQMAREARAAFNAGASIMHIHLRQQEPNKGHLP 60 MSDKAVITC+LNGVLTDPK H+VPVTPEQMAREA+AA++AGA+I+HIHLR Q P+KGHLP Sbjct: 1 MSDKAVITCSLNGVLTDPKLHHVPVTPEQMAREAKAAYDAGAAIVHIHLRDQRPDKGHLP 60 Query: 61 SWDVGVSKEIQQAIREACPGVIINHTTGTSGPNYQGALDCVRETRPEIAACNAGSLNYLK 120 SWDV VS+EIQQAIREACPG+IINHT+GTSGPNYQG L C+RETRPEIAACNAGSLNYLK Sbjct: 61 SWDVSVSREIQQAIREACPGIIINHTSGTSGPNYQGPLACIRETRPEIAACNAGSLNYLK 120 Query: 121 VKADNTWAWPPMMFDNAVEKVQDYLDVMKAAGTIPEFECFDVGIVRCVGMYRQTGMYSGP 180 VKADN+WAWPPMMFDN+V+K+QD+LD MK AGTIPEFECFDVGIVRCVGMY QTGMYSGP Sbjct: 121 VKADNSWAWPPMMFDNSVDKIQDFLDAMKDAGTIPEFECFDVGIVRCVGMYVQTGMYSGP 180 Query: 181 LEYNFVMGVASGMPADPELLPILLRLKAPEAHWQVTAIGRAEIWPLHQRAADLGGHLRSG 240 LEYNFVMGVASGMPADPELLPILL+LK PEAHWQVTAIGRAEIWPLHQ ADLGGHLR+G Sbjct: 181 LEYNFVMGVASGMPADPELLPILLKLKRPEAHWQVTAIGRAEIWPLHQACADLGGHLRTG 240 Query: 241 LEDTFYLGDGTKVTSNGQLVEGLAACARRAGREIASPAEARQIFGV 286 LEDTFYL +G KVTSNGQL+E +A CARRAGREIASP EAR+IFGV Sbjct: 241 LEDTFYLANGEKVTSNGQLIEEIAGCARRAGREIASPEEARKIFGV 286